RNA–Protein interactions for RNA: ENST00000635530.1

SMARCA2-242, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-242ENST00000635530 AEBP2Q6ZN18 517 aaPredicted RBP30.73■■■□□ 2.51
SMARCA2-242ENST00000635530 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
SMARCA2-242ENST00000635530 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
SMARCA2-242ENST00000635530 SENP3Q9H4L4 574 aaPredicted RBP25.88■■□□□ 1.73
SMARCA2-242ENST00000635530 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
SMARCA2-242ENST00000635530 FOXD1Q16676 465 aa24.03■■□□□ 1.44
SMARCA2-242ENST00000635530 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
SMARCA2-242ENST00000635530 ADRA2BP18089 450 aa23.48■■□□□ 1.35
SMARCA2-242ENST00000635530 PIAS4Q8N2W9 510 aaPredicted RBP22.71■■□□□ 1.23
SMARCA2-242ENST00000635530 KCNA4P22459 653 aa22.06■■□□□ 1.12
SMARCA2-242ENST00000635530 PPP4R3CPQ6ZMV5 832 aa21.99■■□□□ 1.11
SMARCA2-242ENST00000635530 MSH5O43196 834 aa21.89■■□□□ 1.09
SMARCA2-242ENST00000635530 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
SMARCA2-242ENST00000635530 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
SMARCA2-242ENST00000635530 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
SMARCA2-242ENST00000635530 CNKSR2Q8WXI2 1034 aa21.24■□□□□ 0.99
SMARCA2-242ENST00000635530 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
SMARCA2-242ENST00000635530 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
SMARCA2-242ENST00000635530 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
SMARCA2-242ENST00000635530 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
SMARCA2-242ENST00000635530 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
SMARCA2-242ENST00000635530 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
SMARCA2-242ENST00000635530 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
SMARCA2-242ENST00000635530 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
SMARCA2-242ENST00000635530 HOXD11P31277 338 aaPredicted RBP20.56■□□□□ 0.88
SMARCA2-242ENST00000635530 ZBTB22O15209 634 aa20.38■□□□□ 0.85
SMARCA2-242ENST00000635530 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
SMARCA2-242ENST00000635530 SLC4A2P04920 1241 aa20■□□□□ 0.79
SMARCA2-242ENST00000635530 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
SMARCA2-242ENST00000635530 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
SMARCA2-242ENST00000635530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMARCA2-242ENST00000635530 ATXN8OSP0DMR3 200 aa19.37■□□□□ 0.69
SMARCA2-242ENST00000635530 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
SMARCA2-242ENST00000635530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
SMARCA2-242ENST00000635530 HNRNPUL2Q1KMD3 747 aaKnown RBP19.12■□□□□ 0.65
SMARCA2-242ENST00000635530 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
SMARCA2-242ENST00000635530 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
SMARCA2-242ENST00000635530 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
SMARCA2-242ENST00000635530 APLP2Q06481 763 aa18.78■□□□□ 0.6
SMARCA2-242ENST00000635530 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
SMARCA2-242ENST00000635530 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
SMARCA2-242ENST00000635530 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
SMARCA2-242ENST00000635530 FKBP8Q14318 412 aa18.52■□□□□ 0.56
SMARCA2-242ENST00000635530 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
SMARCA2-242ENST00000635530 CAPN15O75808 1086 aa18.44■□□□□ 0.54
SMARCA2-242ENST00000635530 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
SMARCA2-242ENST00000635530 POLA2Q14181 598 aa18.31■□□□□ 0.52
SMARCA2-242ENST00000635530 ABCB7O75027 752 aa18.18■□□□□ 0.5
SMARCA2-242ENST00000635530 FBLN2P98095 1184 aa18.13■□□□□ 0.49
SMARCA2-242ENST00000635530 DSG3P32926 999 aa18.11■□□□□ 0.49
SMARCA2-242ENST00000635530 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
SMARCA2-242ENST00000635530 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
SMARCA2-242ENST00000635530 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
SMARCA2-242ENST00000635530 PROM2Q8N271 834 aa17.94■□□□□ 0.46
SMARCA2-242ENST00000635530 RTN4Q9NQC3 1192 aaKnown RBP17.74■□□□□ 0.43
SMARCA2-242ENST00000635530 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.43
SMARCA2-242ENST00000635530 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
SMARCA2-242ENST00000635530 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
SMARCA2-242ENST00000635530 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
SMARCA2-242ENST00000635530 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
SMARCA2-242ENST00000635530 SPDYE2Q495Y8 402 aa17.61■□□□□ 0.41
SMARCA2-242ENST00000635530 SSUH2Q9Y2M2 353 aa17.6■□□□□ 0.41
SMARCA2-242ENST00000635530 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
SMARCA2-242ENST00000635530 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-242ENST00000635530 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMARCA2-242ENST00000635530 IFNLR1Q8IU57 520 aaPredicted RBP17.33■□□□□ 0.36
SMARCA2-242ENST00000635530 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
SMARCA2-242ENST00000635530 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-242ENST00000635530 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
SMARCA2-242ENST00000635530 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
SMARCA2-242ENST00000635530 MIER1Q8N108 512 aa16.99■□□□□ 0.31
SMARCA2-242ENST00000635530 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
SMARCA2-242ENST00000635530 SPOCK2Q92563 424 aa16.96■□□□□ 0.31
SMARCA2-242ENST00000635530 PKD2Q13563 968 aa16.95■□□□□ 0.3
SMARCA2-242ENST00000635530 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-242ENST00000635530 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
SMARCA2-242ENST00000635530 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
SMARCA2-242ENST00000635530 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
SMARCA2-242ENST00000635530 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
SMARCA2-242ENST00000635530 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
SMARCA2-242ENST00000635530 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
SMARCA2-242ENST00000635530 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
SMARCA2-242ENST00000635530 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
SMARCA2-242ENST00000635530 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
SMARCA2-242ENST00000635530 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-242ENST00000635530 NUBP1P53384 320 aa16.63■□□□□ 0.25
SMARCA2-242ENST00000635530 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
SMARCA2-242ENST00000635530 RGL2O15211 777 aa16.56■□□□□ 0.24
SMARCA2-242ENST00000635530 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
SMARCA2-242ENST00000635530 GSE1Q14687 1217 aa16.48■□□□□ 0.23
SMARCA2-242ENST00000635530 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
SMARCA2-242ENST00000635530 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
SMARCA2-242ENST00000635530 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
SMARCA2-242ENST00000635530 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMARCA2-242ENST00000635530 PLCB2Q00722 1185 aa16.41■□□□□ 0.22
SMARCA2-242ENST00000635530 RNF25Q96BH1 459 aaPredicted RBP16.39■□□□□ 0.21
SMARCA2-242ENST00000635530 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
SMARCA2-242ENST00000635530 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
SMARCA2-242ENST00000635530 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMARCA2-242ENST00000635530 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms