RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 BIN2Q9UBW5 565 aaPredicted RBP8.67□□□□□ -1.02
DDX1-208ENST00000621973 PEX14O75381 377 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 PARNO95453 639 aaKnown RBP8.66□□□□□ -1.02
DDX1-208ENST00000621973 HDLBPQ00341 1268 aaKnown RBP8.66□□□□□ -1.02
DDX1-208ENST00000621973 NLGN1Q8N2Q7 840 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
DDX1-208ENST00000621973 BACH2Q9BYV9 841 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 TANGO6Q9C0B7 1094 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
DDX1-208ENST00000621973 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 TLDC2A0PJX2 215 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 SLC39A7Q92504 469 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 ZBTB3Q9H5J0 574 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 KIF21AQ7Z4S6 1674 aa8.66□□□□□ -1.02
DDX1-208ENST00000621973 DNAJB2P25686 324 aa8.65□□□□□ -1.02
DDX1-208ENST00000621973 RAD51AP2Q09MP3 1159 aa8.65□□□□□ -1.02
DDX1-208ENST00000621973 PIF1Q9H611 641 aa8.65□□□□□ -1.02
DDX1-208ENST00000621973 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
DDX1-208ENST00000621973 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
DDX1-208ENST00000621973 TARBP1Q13395 1621 aaKnown RBP8.65□□□□□ -1.03
DDX1-208ENST00000621973 PSME1Q06323 249 aa8.65□□□□□ -1.03
DDX1-208ENST00000621973 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.03
DDX1-208ENST00000621973 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
DDX1-208ENST00000621973 CCDC144BQ3MJ40 725 aa8.64□□□□□ -1.03
DDX1-208ENST00000621973 NUDT18Q6ZVK8 323 aa8.64□□□□□ -1.03
DDX1-208ENST00000621973 CCDC136Q96JN2 1154 aa8.64□□□□□ -1.03
DDX1-208ENST00000621973 TSKSQ9UJT2 592 aa8.64□□□□□ -1.03
DDX1-208ENST00000621973 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
DDX1-208ENST00000621973 C3orf80F5H4A9 247 aa8.63□□□□□ -1.03
DDX1-208ENST00000621973 ELOAQ14241 798 aaKnown RBP8.63□□□□□ -1.03
DDX1-208ENST00000621973 TBX22Q9Y458 520 aa8.63□□□□□ -1.03
DDX1-208ENST00000621973 COL9A1P20849 921 aa8.63□□□□□ -1.03
DDX1-208ENST00000621973 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
DDX1-208ENST00000621973 CTDSPL2Q05D32 466 aa8.62□□□□□ -1.03
DDX1-208ENST00000621973 GRIN2BQ13224 1484 aa8.62□□□□□ -1.03
DDX1-208ENST00000621973 NUDT7P0C024 238 aa8.62□□□□□ -1.03
DDX1-208ENST00000621973 LDLRAD1Q5T700 205 aa8.62□□□□□ -1.03
DDX1-208ENST00000621973 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
DDX1-208ENST00000621973 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
DDX1-208ENST00000621973 HOXA2O43364 376 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 PTPROQ16827 1216 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
DDX1-208ENST00000621973 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
DDX1-208ENST00000621973 FGD6Q6ZV73 1430 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 KCNB2Q92953 911 aa8.61□□□□□ -1.03
DDX1-208ENST00000621973 NBPF26B4DH59 902 aa8.6□□□□□ -1.03
DDX1-208ENST00000621973 FDX1P10109 184 aa8.6□□□□□ -1.03
DDX1-208ENST00000621973 USP46P62068 366 aa8.6□□□□□ -1.03
DDX1-208ENST00000621973 METTL14Q9HCE5 456 aaKnown RBP8.6□□□□□ -1.03
DDX1-208ENST00000621973 PRDM10Q9NQV6 1147 aa8.6□□□□□ -1.03
DDX1-208ENST00000621973 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
DDX1-208ENST00000621973 MRC2Q9UBG0 1479 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 TATDN2Q93075 761 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 PRKAG2Q9UGJ0 569 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 METRNQ9UJH8 293 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 IGBP1P78318 339 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 TCEAL1Q15170 157 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.031e-7■■■■□ 21.8
DDX1-208ENST00000621973 EVI5LQ96CN4 794 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 LRRIQ1Q96JM4 1722 aa8.59□□□□□ -1.03
DDX1-208ENST00000621973 PBRM1Q86U86 1689 aa8.59□□□□□ -1.04
DDX1-208ENST00000621973 ATP9BO43861 1147 aa8.58□□□□□ -1.04
DDX1-208ENST00000621973 APBB1IPQ7Z5R6 666 aaPredicted RBP8.58□□□□□ -1.04
DDX1-208ENST00000621973 SGSM3Q96HU1 749 aa8.58□□□□□ -1.04
DDX1-208ENST00000621973 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
DDX1-208ENST00000621973 GTF2F1P35269 517 aaKnown RBP eCLIP8.58□□□□□ -1.04
DDX1-208ENST00000621973 GCGRP47871 477 aa8.58□□□□□ -1.04
DDX1-208ENST00000621973 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
DDX1-208ENST00000621973 YTHDC1Q96MU7 727 aaKnown RBP8.58□□□□□ -1.04
DDX1-208ENST00000621973 PPP1R3GB7ZBB8 358 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 MRPL58Q14197 206 aaKnown RBP8.57□□□□□ -1.04
DDX1-208ENST00000621973 HSP90AB4PQ58FF6 505 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
DDX1-208ENST00000621973 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 NCOA2Q15596 1464 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 EHBP1L1Q8N3D4 1523 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 MYOM3Q5VTT5 1437 aa8.57□□□□□ -1.04
DDX1-208ENST00000621973 GABBR2O75899 941 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 SOX11P35716 441 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 MTMR2Q13614 643 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 CCDC181Q5TID7 509 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 SIN3AQ96ST3 1273 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 CCDC18Q5T9S5 1454 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 SUPT6HQ7KZ85 1726 aaKnown RBP8.56□□□□□ -1.04
DDX1-208ENST00000621973 ARHGEF11O15085 1522 aa8.56□□□□□ -1.04
DDX1-208ENST00000621973 TRIM6-TRIM34B2RNG4 842 aa8.55□□□□□ -1.04
DDX1-208ENST00000621973 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms