RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 MYT1Q01538 1121 aa26.04■■□□□ 1.76
SUSD3-205ENST00000617293 SEPT12Q8IYM1 358 aa26.04■■□□□ 1.76
SUSD3-205ENST00000617293 PANK3Q9H999 370 aa26.04■■□□□ 1.76
SUSD3-205ENST00000617293 COL18A1P39060 1754 aa26.04■■□□□ 1.76
SUSD3-205ENST00000617293 COL5A2P05997 1499 aaPredicted RBP26.04■■□□□ 1.76
SUSD3-205ENST00000617293 ONECUT3O60422 494 aaPredicted RBP26.03■■□□□ 1.76
SUSD3-205ENST00000617293 KIF7Q2M1P5 1343 aa26.03■■□□□ 1.76
SUSD3-205ENST00000617293 SPATA31A1Q5TZJ5 1347 aa26.03■■□□□ 1.76
SUSD3-205ENST00000617293 KIF20BQ96Q89 1820 aa26.01■■□□□ 1.75
SUSD3-205ENST00000617293 RGPD5Q99666 1765 aa26.01■■□□□ 1.75
SUSD3-205ENST00000617293 LTN1O94822 1766 aa26■■□□□ 1.75
SUSD3-205ENST00000617293 FBLN1P23142 703 aa26■■□□□ 1.75
SUSD3-205ENST00000617293 CGNL1Q0VF96 1302 aa25.98■■□□□ 1.75
SUSD3-205ENST00000617293 CSB-PGBD3P0DP91 1061 aa25.98■■□□□ 1.75
SUSD3-205ENST00000617293 TOM1L2Q6ZVM7 507 aa25.98■■□□□ 1.75
SUSD3-205ENST00000617293 BRWD3Q6RI45 1802 aa25.96■■□□□ 1.75
SUSD3-205ENST00000617293 TCP11L2Q8N4U5 519 aa25.96■■□□□ 1.75
SUSD3-205ENST00000617293 CRB1P82279 1406 aa25.96■■□□□ 1.75
SUSD3-205ENST00000617293 WDR17Q8IZU2 1322 aa25.95■■□□□ 1.75
SUSD3-205ENST00000617293 UPF1Q92900 1129 aaKnown RBP eCLIP25.94■■□□□ 1.74
SUSD3-205ENST00000617293 ABCC6O95255 1503 aa25.93■■□□□ 1.74
SUSD3-205ENST00000617293 MAP3K19Q56UN5 1328 aa25.93■■□□□ 1.74
SUSD3-205ENST00000617293 AMPHP49418 695 aa25.93■■□□□ 1.74
SUSD3-205ENST00000617293 RRS1Q15050 365 aaKnown RBP25.93■■□□□ 1.74
SUSD3-205ENST00000617293 BARGINQ6ZT62 677 aa25.93■■□□□ 1.74
SUSD3-205ENST00000617293 KRT27Q7Z3Y8 459 aa25.93■■□□□ 1.74
SUSD3-205ENST00000617293 THRAP3Q9Y2W1 955 aaKnown RBP25.93■■□□□ 1.74
SUSD3-205ENST00000617293 IP6K1Q92551 441 aa25.92■■□□□ 1.74
SUSD3-205ENST00000617293 CCDC7Q96M83 1385 aa25.91■■□□□ 1.74
SUSD3-205ENST00000617293 WASHC2AQ641Q2 1341 aa25.9■■□□□ 1.74
SUSD3-205ENST00000617293 ANKRD24Q8TF21 1146 aa25.9■■□□□ 1.74
SUSD3-205ENST00000617293 LTV1Q96GA3 475 aaPredicted RBP25.89■■□□□ 1.74
SUSD3-205ENST00000617293 KNSTRNQ9Y448 316 aa25.89■■□□□ 1.74
SUSD3-205ENST00000617293 ERBB3P21860 1342 aa25.88■■□□□ 1.73
SUSD3-205ENST00000617293 THSD7AQ9UPZ6 1657 aa25.88■■□□□ 1.73
SUSD3-205ENST00000617293 HOXC9P31274 260 aa25.88■■□□□ 1.73
SUSD3-205ENST00000617293 CARD10Q9BWT7 1032 aa25.88■■□□□ 1.73
SUSD3-205ENST00000617293 NLRP2Q9NX02 1062 aa25.87■■□□□ 1.73
SUSD3-205ENST00000617293 BLMP54132 1417 aaPredicted RBP25.87■■□□□ 1.73
SUSD3-205ENST00000617293 TNNT2P45379 298 aaPredicted RBP25.84■■□□□ 1.73
SUSD3-205ENST00000617293 FAM182BQ5T319 152 aa25.84■■□□□ 1.73
SUSD3-205ENST00000617293 PDE3BQ13370 1112 aa25.83■■□□□ 1.73
SUSD3-205ENST00000617293 ANKRD26Q9UPS8 1709 aa25.83■■□□□ 1.72
SUSD3-205ENST00000617293 PPM1GO15355 546 aaPredicted RBP25.82■■□□□ 1.72
SUSD3-205ENST00000617293 EMILIN1Q9Y6C2 1016 aa25.82■■□□□ 1.72
SUSD3-205ENST00000617293 EP400Q96L91 3159 aa25.82■■□□□ 1.72
SUSD3-205ENST00000617293 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
SUSD3-205ENST00000617293 NSD2O96028 1365 aa25.81■■□□□ 1.72
SUSD3-205ENST00000617293 MAP2P11137 1827 aaKnown RBP25.8■■□□□ 1.72
SUSD3-205ENST00000617293 HSP90AB2PQ58FF8 381 aa25.8■■□□□ 1.72
SUSD3-205ENST00000617293 PER1O15534 1290 aaPredicted RBP25.79■■□□□ 1.72
SUSD3-205ENST00000617293 ZEB1P37275 1124 aaPredicted RBP25.79■■□□□ 1.72
SUSD3-205ENST00000617293 MORC1Q86VD1 984 aa25.79■■□□□ 1.72
SUSD3-205ENST00000617293 CDCA7Q9BWT1 371 aaPredicted RBP25.79■■□□□ 1.72
SUSD3-205ENST00000617293 DDB1Q16531 1140 aa25.78■■□□□ 1.72
SUSD3-205ENST00000617293 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
SUSD3-205ENST00000617293 FLT4P35916 1363 aa25.78■■□□□ 1.72
SUSD3-205ENST00000617293 PEAK1Q9H792 1746 aa25.77■■□□□ 1.72
SUSD3-205ENST00000617293 PARP4Q9UKK3 1724 aaKnown RBP25.77■■□□□ 1.72
SUSD3-205ENST00000617293 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
SUSD3-205ENST00000617293 CCDC125Q86Z20 511 aa25.76■■□□□ 1.71
SUSD3-205ENST00000617293 POLKQ9UBT6 870 aa25.76■■□□□ 1.71
SUSD3-205ENST00000617293 WNK3Q9BYP7 1800 aa25.76■■□□□ 1.71
SUSD3-205ENST00000617293 INSRP06213 1382 aa25.75■■□□□ 1.71
SUSD3-205ENST00000617293 FAM208AQ9UK61 1670 aaKnown RBP25.74■■□□□ 1.71
SUSD3-205ENST00000617293 SMG6Q86US8 1419 aaKnown RBP25.74■■□□□ 1.71
SUSD3-205ENST00000617293 DISP2A7MBM2 1401 aa25.73■■□□□ 1.71
SUSD3-205ENST00000617293 EXOC5O00471 708 aa25.73■■□□□ 1.71
SUSD3-205ENST00000617293 IL2RBP14784 551 aa25.73■■□□□ 1.71
SUSD3-205ENST00000617293 CNGB1Q14028 1251 aaPredicted RBP25.73■■□□□ 1.71
SUSD3-205ENST00000617293 CC2D1BQ5T0F9 858 aaKnown RBP25.73■■□□□ 1.71
SUSD3-205ENST00000617293 FAM196AQ6ZSG2 479 aa25.73■■□□□ 1.71
SUSD3-205ENST00000617293 RGPD2P0DJD1 1756 aa25.73■■□□□ 1.71
SUSD3-205ENST00000617293 SF3B2Q13435 895 aaKnown RBP25.72■■□□□ 1.71
SUSD3-205ENST00000617293 LRRC37A3O60309 1634 aa25.72■■□□□ 1.71
SUSD3-205ENST00000617293 NBPF6Q5VWK0 638 aa25.71■■□□□ 1.71
SUSD3-205ENST00000617293 NBPF4Q96M43 638 aa25.71■■□□□ 1.71
SUSD3-205ENST00000617293 USHBP1Q8N6Y0 703 aa25.68■■□□□ 1.7
SUSD3-205ENST00000617293 TRIM37O94972 964 aa25.66■■□□□ 1.7
SUSD3-205ENST00000617293 MARCH10Q8NA82 808 aaPredicted RBP25.66■■□□□ 1.7
SUSD3-205ENST00000617293 OVOS2A0A0G2JMS6 1433 aa25.63■■□□□ 1.69
SUSD3-205ENST00000617293 DEFB132Q7Z7B7 95 aa25.63■■□□□ 1.69
SUSD3-205ENST00000617293 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
SUSD3-205ENST00000617293 TNS2Q63HR2 1409 aa25.63■■□□□ 1.69
SUSD3-205ENST00000617293 RGPD1P0DJD0 1748 aa25.61■■□□□ 1.69
SUSD3-205ENST00000617293 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
SUSD3-205ENST00000617293 RAPGEF4Q8WZA2 1011 aa25.61■■□□□ 1.69
SUSD3-205ENST00000617293 BAG6P46379 1132 aa25.6■■□□□ 1.69
SUSD3-205ENST00000617293 EYA1Q99502 592 aa25.6■■□□□ 1.69
SUSD3-205ENST00000617293 MTHFSP49914 203 aa25.59■■□□□ 1.69
SUSD3-205ENST00000617293 DDX54Q8TDD1 881 aaKnown RBP25.59■■□□□ 1.69
SUSD3-205ENST00000617293 MEGF6O75095 1541 aa25.58■■□□□ 1.69
SUSD3-205ENST00000617293 TATP17735 454 aaPredicted RBP25.58■■□□□ 1.69
SUSD3-205ENST00000617293 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
SUSD3-205ENST00000617293 APBA3O96018 575 aa25.56■■□□□ 1.68
SUSD3-205ENST00000617293 TNS1Q9HBL0 1735 aaKnown RBP25.55■■□□□ 1.68
SUSD3-205ENST00000617293 EN1Q05925 392 aaPredicted RBP25.55■■□□□ 1.68
SUSD3-205ENST00000617293 SBF2Q86WG5 1849 aa25.55■■□□□ 1.68
SUSD3-205ENST00000617293 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
SUSD3-205ENST00000617293 BCL9O00512 1426 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms