RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 COL18A1P39060 1754 aa14.99□□□□□ -0.01
COL4A1-205ENST00000615732 NLRP6P59044 892 aa14.99□□□□□ -0.01
COL4A1-205ENST00000615732 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
COL4A1-205ENST00000615732 SOX12O15370 315 aa14.98□□□□□ -0.01
COL4A1-205ENST00000615732 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-205ENST00000615732 EVC2Q86UK5 1308 aa14.97□□□□□ -0.01
COL4A1-205ENST00000615732 AATKQ6ZMQ8 1374 aa14.97□□□□□ -0.01
COL4A1-205ENST00000615732 CASZ1Q86V15 1759 aa14.96□□□□□ -0.01
COL4A1-205ENST00000615732 CPSF1Q10570 1443 aaKnown RBP14.95□□□□□ -0.02
COL4A1-205ENST00000615732 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-205ENST00000615732 AKAP12Q02952 1782 aa14.95□□□□□ -0.02
COL4A1-205ENST00000615732 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL4A1-205ENST00000615732 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
COL4A1-205ENST00000615732 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
COL4A1-205ENST00000615732 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 C11orf95C9JLR9 678 aaPredicted RBP14.93□□□□□ -0.02
COL4A1-205ENST00000615732 KCNQ2O43526 872 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 YY1P25490 414 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
COL4A1-205ENST00000615732 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
COL4A1-205ENST00000615732 DDB1Q16531 1140 aa14.92□□□□□ -0.02
COL4A1-205ENST00000615732 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
COL4A1-205ENST00000615732 WDR17Q8IZU2 1322 aa14.92□□□□□ -0.02
COL4A1-205ENST00000615732 PLSCR1O15162 318 aa14.91□□□□□ -0.02
COL4A1-205ENST00000615732 NFAT5O94916 1531 aa14.91□□□□□ -0.02
COL4A1-205ENST00000615732 MYOM1P52179 1685 aa14.9□□□□□ -0.02
COL4A1-205ENST00000615732 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
COL4A1-205ENST00000615732 MARCH10Q8NA82 808 aaPredicted RBP14.9□□□□□ -0.02
COL4A1-205ENST00000615732 BCL9O00512 1426 aa14.9□□□□□ -0.02
COL4A1-205ENST00000615732 CSB-PGBD3P0DP91 1061 aa14.89□□□□□ -0.03
COL4A1-205ENST00000615732 ARHGEF25Q86VW2 580 aa14.89□□□□□ -0.03
COL4A1-205ENST00000615732 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-205ENST00000615732 PDGFDQ9GZP0 370 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-205ENST00000615732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL4A1-205ENST00000615732 MIER1Q8N108 512 aa14.88□□□□□ -0.03
COL4A1-205ENST00000615732 PROM2Q8N271 834 aa14.88□□□□□ -0.03
COL4A1-205ENST00000615732 TTC21AQ8NDW8 1320 aa14.88□□□□□ -0.03
COL4A1-205ENST00000615732 ABCC6O95255 1503 aa14.87□□□□□ -0.03
COL4A1-205ENST00000615732 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
COL4A1-205ENST00000615732 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
COL4A1-205ENST00000615732 KCNH5Q8NCM2 988 aa14.86□□□□□ -0.03
COL4A1-205ENST00000615732 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-205ENST00000615732 CDCA7Q9BWT1 371 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-205ENST00000615732 CARD11Q9BXL7 1154 aa14.86□□□□□ -0.03
COL4A1-205ENST00000615732 CD163L1Q9NR16 1453 aa14.86□□□□□ -0.03
COL4A1-205ENST00000615732 UTRNP46939 3433 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 TNS2Q63HR2 1409 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 NHSQ6T4R5 1651 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 NME9Q86XW9 330 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 CARD10Q9BWT7 1032 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
COL4A1-205ENST00000615732 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
COL4A1-205ENST00000615732 ZBTB7AO95365 584 aa14.84□□□□□ -0.03
COL4A1-205ENST00000615732 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
COL4A1-205ENST00000615732 USP47Q96K76 1375 aa14.84□□□□□ -0.03
COL4A1-205ENST00000615732 PTGER2P43116 358 aa14.83□□□□□ -0.04
COL4A1-205ENST00000615732 PAPPAQ13219 1627 aa14.83□□□□□ -0.04
COL4A1-205ENST00000615732 CCDC7Q96M83 1385 aa14.83□□□□□ -0.04
COL4A1-205ENST00000615732 TXNRD1Q16881 649 aa14.82□□□□□ -0.04
COL4A1-205ENST00000615732 LTN1O94822 1766 aa14.81□□□□□ -0.04
COL4A1-205ENST00000615732 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
COL4A1-205ENST00000615732 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
COL4A1-205ENST00000615732 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
COL4A1-205ENST00000615732 USP31Q70CQ4 1352 aa14.81□□□□□ -0.04
COL4A1-205ENST00000615732 EXOC5O00471 708 aa14.8□□□□□ -0.04
COL4A1-205ENST00000615732 SLC15A2Q16348 729 aa14.8□□□□□ -0.04
COL4A1-205ENST00000615732 SLC12A5Q9H2X9 1139 aa14.8□□□□□ -0.04
COL4A1-205ENST00000615732 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
COL4A1-205ENST00000615732 ERBB3P21860 1342 aa14.8□□□□□ -0.04
COL4A1-205ENST00000615732 EDC4Q6P2E9 1401 aaKnown RBP14.79□□□□□ -0.04
COL4A1-205ENST00000615732 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
COL4A1-205ENST00000615732 NLRP2Q9NX02 1062 aa14.79□□□□□ -0.04
COL4A1-205ENST00000615732 BTAF1O14981 1849 aa14.78□□□□□ -0.04
COL4A1-205ENST00000615732 ANKRD24Q8TF21 1146 aa14.77□□□□□ -0.05
COL4A1-205ENST00000615732 ACSBG1Q96GR2 724 aa14.77□□□□□ -0.05
COL4A1-205ENST00000615732 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.05
COL4A1-205ENST00000615732 FHDC1Q9C0D6 1143 aaPredicted RBP14.77□□□□□ -0.05
COL4A1-205ENST00000615732 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
COL4A1-205ENST00000615732 ANP32CO43423 234 aa14.76□□□□□ -0.05
COL4A1-205ENST00000615732 MTFR1LQ9H019 292 aa14.76□□□□□ -0.05
COL4A1-205ENST00000615732 SYT17Q9BSW7 474 aa14.75□□□□□ -0.05
COL4A1-205ENST00000615732 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
COL4A1-205ENST00000615732 TERF2IPQ9NYB0 399 aa14.74□□□□□ -0.05
COL4A1-205ENST00000615732 CENPBP07199 599 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-205ENST00000615732 IL2RBP14784 551 aa14.73□□□□□ -0.05
COL4A1-205ENST00000615732 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
COL4A1-205ENST00000615732 ZNF784Q8NCA9 323 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-205ENST00000615732 ST20-MTHFSA0A0A6YYL1 179 aa14.72□□□□□ -0.05
COL4A1-205ENST00000615732 TESK2Q96S53 571 aa14.72□□□□□ -0.05
COL4A1-205ENST00000615732 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
COL4A1-205ENST00000615732 FAM208AQ9UK61 1670 aaKnown RBP14.71□□□□□ -0.05
COL4A1-205ENST00000615732 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.05
COL4A1-205ENST00000615732 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
COL4A1-205ENST00000615732 CHD4Q14839 1912 aa14.7□□□□□ -0.06
COL4A1-205ENST00000615732 FBLN1P23142 703 aa14.7□□□□□ -0.06
COL4A1-205ENST00000615732 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
COL4A1-205ENST00000615732 ARXQ96QS3 562 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms