RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MPNDQ8N594 471 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 HELBQ8NG08 1087 aaPredicted RBP6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 SPACA7Q96KW9 195 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 PRR12Q9ULL5 1215 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 CCDC189A1A4V9 331 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 CLEC4GQ6UXB4 293 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 SH3BP1Q9Y3L3 701 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 WDHD1O75717 1129 aaPredicted RBP6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 MCCD1P59942 119 aaPredicted RBP6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 GPR153Q6NV75 609 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 SMC5Q8IY18 1101 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 PHLDB1Q86UU1 1377 aa6.41□□□□□ -1.38
SPTBN1-206ENST00000602898 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.38
SPTBN1-206ENST00000602898 DHX16O60231 1041 aaKnown RBP6.4□□□□□ -1.38
SPTBN1-206ENST00000602898 TTLL12Q14166 644 aaPredicted RBP6.4□□□□□ -1.38
SPTBN1-206ENST00000602898 ATL2Q8NHH9 583 aa6.4□□□□□ -1.38
SPTBN1-206ENST00000602898 C8orf37Q96NL8 207 aa6.4□□□□□ -1.38
SPTBN1-206ENST00000602898 RGS3P49796 1198 aa6.4□□□□□ -1.39
SPTBN1-206ENST00000602898 TBC1D2Q9BYX2 928 aa6.4□□□□□ -1.39
SPTBN1-206ENST00000602898 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.39
SPTBN1-206ENST00000602898 SNRKQ9NRH2 765 aa6.4□□□□□ -1.39
SPTBN1-206ENST00000602898 BCORL1Q5H9F3 1711 aa6.4□□□□□ -1.39
SPTBN1-206ENST00000602898 CLGNO14967 610 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 GNPATO15228 680 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 BDNFP23560 247 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 ZNF710Q8N1W2 664 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 MAF1Q9H063 256 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 MAGI3Q5TCQ9 1506 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 ZNF500O60304 480 aaPredicted RBP6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 RECKO95980 971 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 ERCC3P19447 782 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 COL9A1P20849 921 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 EN1Q05925 392 aaPredicted RBP6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 CCDC146Q8IYE0 955 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 DHX38Q92620 1227 aaKnown RBP6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 UBA5Q9GZZ9 404 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 PIF1Q9H611 641 aa6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 GNL3LQ9NVN8 582 aaKnown RBP6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 IQSEC3Q9UPP2 1182 aaPredicted RBP6.39□□□□□ -1.39
SPTBN1-206ENST00000602898 MS4A1P11836 297 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 EVA1CP58658 441 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 PTPROQ16827 1216 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 CCDC96Q2M329 555 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 PROX2Q3B8N5 592 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 PADI6Q6TGC4 694 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 ZNF622Q969S3 477 aaKnown RBP eCLIP6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 PBXIP1Q96AQ6 731 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 PDCL3Q9H2J4 239 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 ATP1B4Q9UN42 357 aaPredicted RBP6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 IRF6O14896 467 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 CSB-PGBD3P0DP91 1061 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 FAM198AQ9UFP1 575 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 BIVM-ERCC5R4GMW8 1640 aa6.38□□□□□ -1.39
SPTBN1-206ENST00000602898 MDM2Q00987 491 aaPredicted RBP6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 ZNF280DQ6N043 979 aa6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 AQRO60306 1485 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 PSEN2P49810 448 aa6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 IGBP1P78318 339 aa6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 TSNAXIP1Q2TAA8 658 aa6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 EGFLAMQ63HQ2 1017 aa6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 EPRSP07814 1512 aaKnown RBP6.37□□□□□ -1.39
SPTBN1-206ENST00000602898 TCEAL1Q15170 157 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 PCMTD1Q96MG8 357 aaPredicted RBP6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 ARAP3Q8WWN8 1544 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 FHAD1B1AJZ9 1412 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 PREX1Q8TCU6 1659 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 C6orf132Q5T0Z8 1188 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 ARID4AP29374 1257 aaPredicted RBP6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 GYS2P54840 703 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 SCUBE2Q9NQ36 999 aa6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 TMA7Q9Y2S6 64 aaKnown RBP6.36□□□□□ -1.39
SPTBN1-206ENST00000602898 STK10O94804 968 aaKnown RBP6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 ITGAEP38570 1179 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 SOGA1O94964 1423 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 ANP32CO43423 234 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 SLC34A2O95436 690 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 MAP2K5Q13163 448 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 MAGEC2Q9UBF1 373 aaPredicted RBP6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 HDAC5Q9UQL6 1122 aa6.35□□□□□ -1.39
SPTBN1-206ENST00000602898 FCHSD2O94868 740 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 HIC1Q14526 733 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 FBXO31Q5XUX0 539 aaPredicted RBP6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 SDR16C5Q8N3Y7 309 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 ADAMTS19Q8TE59 1207 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 VRTNQ9H8Y1 702 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 NRBP1Q9UHY1 535 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 DMGDHQ9UI17 866 aaKnown RBP6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 KLF15Q9UIH9 416 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 TMEM88BA6NKF7 163 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 HOXA2O43364 376 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 PTGER2P43116 358 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 C4orf46Q504U0 113 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 WDR78Q5VTH9 848 aa6.34□□□□□ -1.39
SPTBN1-206ENST00000602898 KCNB2Q92953 911 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms