RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
SPTBN1-206ENST00000602898 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
SPTBN1-206ENST00000602898 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-206ENST00000602898 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
SPTBN1-206ENST00000602898 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.63
SPTBN1-206ENST00000602898 FOXD1Q16676 465 aa10.88□□□□□ -0.67
SPTBN1-206ENST00000602898 ADRA2BP18089 450 aa10.81□□□□□ -0.68
SPTBN1-206ENST00000602898 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
SPTBN1-206ENST00000602898 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
SPTBN1-206ENST00000602898 PIAS4Q8N2W9 510 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-206ENST00000602898 KCNA4P22459 653 aa10.15□□□□□ -0.78
SPTBN1-206ENST00000602898 PPP4R3CPQ6ZMV5 832 aa9.92□□□□□ -0.82
SPTBN1-206ENST00000602898 EHMT2Q96KQ7 1210 aa9.88□□□□□ -0.83
SPTBN1-206ENST00000602898 MAPK8IP2Q13387 824 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-206ENST00000602898 NPM3O75607 178 aaKnown RBP9.65□□□□□ -0.87
SPTBN1-206ENST00000602898 MSH5O43196 834 aa9.62□□□□□ -0.87
SPTBN1-206ENST00000602898 SLC4A1APQ9BWU0 796 aaKnown RBP9.55□□□□□ -0.88
SPTBN1-206ENST00000602898 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-206ENST00000602898 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-206ENST00000602898 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
SPTBN1-206ENST00000602898 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
SPTBN1-206ENST00000602898 ZBTB22O15209 634 aa9.42□□□□□ -0.9
SPTBN1-206ENST00000602898 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
SPTBN1-206ENST00000602898 DAXXQ9UER7 740 aaPredicted RBP9.35□□□□□ -0.91
SPTBN1-206ENST00000602898 DMRT2Q9Y5R5 561 aa9.23□□□□□ -0.93
SPTBN1-206ENST00000602898 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
SPTBN1-206ENST00000602898 RNF216Q9NWF9 866 aaPredicted RBP9.18□□□□□ -0.94
SPTBN1-206ENST00000602898 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
SPTBN1-206ENST00000602898 SLC4A2P04920 1241 aa9.1□□□□□ -0.95
SPTBN1-206ENST00000602898 HOXD11P31277 338 aaPredicted RBP9.09□□□□□ -0.95
SPTBN1-206ENST00000602898 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
SPTBN1-206ENST00000602898 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
SPTBN1-206ENST00000602898 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
SPTBN1-206ENST00000602898 APLP2Q06481 763 aa8.89□□□□□ -0.99
SPTBN1-206ENST00000602898 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
SPTBN1-206ENST00000602898 ATF5Q9Y2D1 282 aaPredicted RBP8.84□□□□□ -0.99
SPTBN1-206ENST00000602898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.83□□□□□ -16e-14■■□□□ 14.1
SPTBN1-206ENST00000602898 NISCHQ9Y2I1 1504 aa8.82□□□□□ -1
SPTBN1-206ENST00000602898 DNAJC5BQ9UF47 199 aa8.81□□□□□ -1
SPTBN1-206ENST00000602898 MYT1Q01538 1121 aa8.8□□□□□ -1
SPTBN1-206ENST00000602898 TULP1O00294 542 aaPredicted RBP8.8□□□□□ -1
SPTBN1-206ENST00000602898 ARXQ96QS3 562 aa8.76□□□□□ -1.01
SPTBN1-206ENST00000602898 ERICH6Q7L0X2 663 aa8.76□□□□□ -1.01
SPTBN1-206ENST00000602898 U3KPZ7 1027 aaPredicted RBP8.75□□□□□ -1.01
SPTBN1-206ENST00000602898 TTBK1Q5TCY1 1321 aaPredicted RBP8.74□□□□□ -1.01
SPTBN1-206ENST00000602898 MYCNP04198 464 aaPredicted RBP8.72□□□□□ -1.01
SPTBN1-206ENST00000602898 TAOK2Q9UL54 1235 aa8.71□□□□□ -1.01
SPTBN1-206ENST00000602898 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
SPTBN1-206ENST00000602898 KLHL34Q8N239 644 aa8.65□□□□□ -1.03
SPTBN1-206ENST00000602898 POTEDQ86YR6 584 aa8.64□□□□□ -1.03
SPTBN1-206ENST00000602898 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
SPTBN1-206ENST00000602898 SPINK5Q9NQ38 1064 aaPredicted RBP8.6□□□□□ -1.03
SPTBN1-206ENST00000602898 RANGAP1P46060 587 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-206ENST00000602898 FKBP8Q14318 412 aa8.55□□□□□ -1.04
SPTBN1-206ENST00000602898 PODXL2Q9NZ53 605 aa8.54□□□□□ -1.04
SPTBN1-206ENST00000602898 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
SPTBN1-206ENST00000602898 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-206ENST00000602898 BCANQ96GW7 911 aa8.5□□□□□ -1.05
SPTBN1-206ENST00000602898 EIF5BO60841 1220 aaKnown RBP8.48□□□□□ -1.05
SPTBN1-206ENST00000602898 ABCB7O75027 752 aa8.45□□□□□ -1.06
SPTBN1-206ENST00000602898 ATXN8OSP0DMR3 200 aa8.44□□□□□ -1.06
SPTBN1-206ENST00000602898 CAPN15O75808 1086 aa8.43□□□□□ -1.06
SPTBN1-206ENST00000602898 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
SPTBN1-206ENST00000602898 RNF39Q9H2S5 420 aa8.43□□□□□ -1.06
SPTBN1-206ENST00000602898 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
SPTBN1-206ENST00000602898 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
SPTBN1-206ENST00000602898 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
SPTBN1-206ENST00000602898 GTF3C3Q9Y5Q9 886 aa8.4□□□□□ -1.07
SPTBN1-206ENST00000602898 POLA2Q14181 598 aa8.38□□□□□ -1.07
SPTBN1-206ENST00000602898 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
SPTBN1-206ENST00000602898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.36□□□□□ -1.07
SPTBN1-206ENST00000602898 MKRN4PQ13434 485 aaPredicted RBP8.36□□□□□ -1.07
SPTBN1-206ENST00000602898 HNRNPUL2Q1KMD3 747 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-206ENST00000602898 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
SPTBN1-206ENST00000602898 NPM2Q86SE8 214 aaKnown RBP8.29□□□□□ -1.08
SPTBN1-206ENST00000602898 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
SPTBN1-206ENST00000602898 ABCC9O60706 1549 aa8.24□□□□□ -1.09
SPTBN1-206ENST00000602898 RB1CC1Q8TDY2 1594 aa8.21□□□□□ -1.09
SPTBN1-206ENST00000602898 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
SPTBN1-206ENST00000602898 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-206ENST00000602898 C1QBPQ07021 282 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-206ENST00000602898 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
SPTBN1-206ENST00000602898 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
SPTBN1-206ENST00000602898 DSG3P32926 999 aa8.16□□□□□ -1.1
SPTBN1-206ENST00000602898 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
SPTBN1-206ENST00000602898 KDM2AQ9Y2K7 1162 aa8.14□□□□□ -1.11
SPTBN1-206ENST00000602898 FBLN2P98095 1184 aa8.13□□□□□ -1.11
SPTBN1-206ENST00000602898 DNAJC5Q9H3Z4 198 aa8.13□□□□□ -1.11
SPTBN1-206ENST00000602898 MYO15BQ96JP2 1530 aa8.12□□□□□ -1.11
SPTBN1-206ENST00000602898 NACADO15069 1562 aa8.12□□□□□ -1.11
SPTBN1-206ENST00000602898 CACNB1Q02641 598 aaPredicted RBP8.12□□□□□ -1.11
SPTBN1-206ENST00000602898 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
SPTBN1-206ENST00000602898 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
SPTBN1-206ENST00000602898 HRCP23327 699 aa8.06□□□□□ -1.12
SPTBN1-206ENST00000602898 DCAF8L2P0C7V8 631 aa8.01□□□□□ -1.13
SPTBN1-206ENST00000602898 UNC13AQ9UPW8 1703 aa8.01□□□□□ -1.13
SPTBN1-206ENST00000602898 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
SPTBN1-206ENST00000602898 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
SPTBN1-206ENST00000602898 CUX2O14529 1486 aa7.96□□□□□ -1.13
SPTBN1-206ENST00000602898 IFNLR1Q8IU57 520 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms