RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 LTN1O94822 1766 aa28.73■■■□□ 2.19
PAF1-207ENST00000598127 KIF7Q2M1P5 1343 aa28.72■■■□□ 2.19
PAF1-207ENST00000598127 PANK3Q9H999 370 aa28.72■■■□□ 2.19
PAF1-207ENST00000598127 COL5A2P05997 1499 aaPredicted RBP28.72■■■□□ 2.19
PAF1-207ENST00000598127 SPATA31A1Q5TZJ5 1347 aa28.71■■■□□ 2.19
PAF1-207ENST00000598127 LARP1Q6PKG0 1096 aaKnown RBP28.71■■■□□ 2.19
PAF1-207ENST00000598127 ABCC6O95255 1503 aa28.69■■■□□ 2.18
PAF1-207ENST00000598127 SEPT12Q8IYM1 358 aa28.69■■■□□ 2.18
PAF1-207ENST00000598127 CGNL1Q0VF96 1302 aa28.69■■■□□ 2.18
PAF1-207ENST00000598127 FAM98CQ17RN3 349 aaKnown RBP28.68■■■□□ 2.18
PAF1-207ENST00000598127 BRWD3Q6RI45 1802 aa28.67■■■□□ 2.18
PAF1-207ENST00000598127 CRB1P82279 1406 aa28.64■■■□□ 2.18
PAF1-207ENST00000598127 USP35Q9P2H5 1018 aa28.64■■■□□ 2.18
PAF1-207ENST00000598127 WDR17Q8IZU2 1322 aa28.64■■■□□ 2.17
PAF1-207ENST00000598127 FBLN1P23142 703 aa28.63■■■□□ 2.17
PAF1-207ENST00000598127 TCP11L2Q8N4U5 519 aa28.63■■■□□ 2.17
PAF1-207ENST00000598127 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
PAF1-207ENST00000598127 BARGINQ6ZT62 677 aa28.62■■■□□ 2.17
PAF1-207ENST00000598127 TOM1L2Q6ZVM7 507 aa28.62■■■□□ 2.17
PAF1-207ENST00000598127 IP6K1Q92551 441 aa28.62■■■□□ 2.17
PAF1-207ENST00000598127 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
PAF1-207ENST00000598127 A0A0G2JS52 829 aa28.61■■■□□ 2.17
PAF1-207ENST00000598127 MYT1Q01538 1121 aa28.61■■■□□ 2.17
PAF1-207ENST00000598127 MAP3K19Q56UN5 1328 aa28.61■■■□□ 2.17
PAF1-207ENST00000598127 WASHC2AQ641Q2 1341 aa28.6■■■□□ 2.17
PAF1-207ENST00000598127 THSD7AQ9UPZ6 1657 aa28.59■■■□□ 2.17
PAF1-207ENST00000598127 CSB-PGBD3P0DP91 1061 aa28.59■■■□□ 2.17
PAF1-207ENST00000598127 UPF1Q92900 1129 aaKnown RBP eCLIP28.58■■■□□ 2.17
PAF1-207ENST00000598127 AMPHP49418 695 aa28.57■■■□□ 2.16
PAF1-207ENST00000598127 KRT27Q7Z3Y8 459 aa28.57■■■□□ 2.16
PAF1-207ENST00000598127 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
PAF1-207ENST00000598127 BLMP54132 1417 aaPredicted RBP28.57■■■□□ 2.16
PAF1-207ENST00000598127 ANKRD26Q9UPS8 1709 aa28.57■■■□□ 2.16
PAF1-207ENST00000598127 ERBB3P21860 1342 aa28.56■■■□□ 2.16
PAF1-207ENST00000598127 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
PAF1-207ENST00000598127 CARD10Q9BWT7 1032 aa28.56■■■□□ 2.16
PAF1-207ENST00000598127 HOXC9P31274 260 aa28.55■■■□□ 2.16
PAF1-207ENST00000598127 ANKRD24Q8TF21 1146 aa28.55■■■□□ 2.16
PAF1-207ENST00000598127 MAP2P11137 1827 aaKnown RBP28.55■■■□□ 2.16
PAF1-207ENST00000598127 NSD2O96028 1365 aa28.53■■■□□ 2.16
PAF1-207ENST00000598127 RTL1A6NKG5 1358 aa28.52■■■□□ 2.16
PAF1-207ENST00000598127 ZEB1P37275 1124 aaPredicted RBP28.52■■■□□ 2.16
PAF1-207ENST00000598127 PER1O15534 1290 aaPredicted RBP28.51■■■□□ 2.15
PAF1-207ENST00000598127 KIF24Q5T7B8 1368 aa28.5■■■□□ 2.15
PAF1-207ENST00000598127 NLRP2Q9NX02 1062 aa28.5■■■□□ 2.15
PAF1-207ENST00000598127 LTV1Q96GA3 475 aaPredicted RBP28.48■■■□□ 2.15
PAF1-207ENST00000598127 CDCA7Q9BWT1 371 aaPredicted RBP28.48■■■□□ 2.15
PAF1-207ENST00000598127 PARP4Q9UKK3 1724 aaKnown RBP28.48■■■□□ 2.15
PAF1-207ENST00000598127 EP400Q96L91 3159 aa28.47■■■□□ 2.15
PAF1-207ENST00000598127 AMER1Q5JTC6 1135 aaPredicted RBP28.47■■■□□ 2.15
PAF1-207ENST00000598127 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
PAF1-207ENST00000598127 FAM208AQ9UK61 1670 aaKnown RBP28.47■■■□□ 2.15
PAF1-207ENST00000598127 EMILIN1Q9Y6C2 1016 aa28.46■■■□□ 2.15
PAF1-207ENST00000598127 FLT4P35916 1363 aa28.46■■■□□ 2.15
PAF1-207ENST00000598127 PEAK1Q9H792 1746 aa28.46■■■□□ 2.15
PAF1-207ENST00000598127 PDE3BQ13370 1112 aa28.45■■■□□ 2.14
PAF1-207ENST00000598127 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
PAF1-207ENST00000598127 HSP90AB2PQ58FF8 381 aa28.44■■■□□ 2.14
PAF1-207ENST00000598127 MORC1Q86VD1 984 aa28.44■■■□□ 2.14
PAF1-207ENST00000598127 CCDC125Q86Z20 511 aa28.44■■■□□ 2.14
PAF1-207ENST00000598127 POLKQ9UBT6 870 aa28.44■■■□□ 2.14
PAF1-207ENST00000598127 INSRP06213 1382 aa28.44■■■□□ 2.14
PAF1-207ENST00000598127 RGPD2P0DJD1 1756 aa28.42■■■□□ 2.14
PAF1-207ENST00000598127 DISP2A7MBM2 1401 aa28.42■■■□□ 2.14
PAF1-207ENST00000598127 PPM1GO15355 546 aaPredicted RBP28.41■■■□□ 2.14
PAF1-207ENST00000598127 DDB1Q16531 1140 aa28.41■■■□□ 2.14
PAF1-207ENST00000598127 FAM182BQ5T319 152 aa28.41■■■□□ 2.14
PAF1-207ENST00000598127 SMG6Q86US8 1419 aaKnown RBP28.38■■■□□ 2.13
PAF1-207ENST00000598127 FAM196AQ6ZSG2 479 aa28.38■■■□□ 2.13
PAF1-207ENST00000598127 LRRC37A3O60309 1634 aa28.38■■■□□ 2.13
PAF1-207ENST00000598127 EXOC5O00471 708 aa28.37■■■□□ 2.13
PAF1-207ENST00000598127 IL2RBP14784 551 aa28.37■■■□□ 2.13
PAF1-207ENST00000598127 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
PAF1-207ENST00000598127 NBPF6Q5VWK0 638 aa28.35■■■□□ 2.13
PAF1-207ENST00000598127 NBPF4Q96M43 638 aa28.35■■■□□ 2.13
PAF1-207ENST00000598127 CC2D1BQ5T0F9 858 aaKnown RBP28.34■■■□□ 2.13
PAF1-207ENST00000598127 SF3B2Q13435 895 aaKnown RBP28.31■■■□□ 2.12
PAF1-207ENST00000598127 MARCH10Q8NA82 808 aaPredicted RBP28.3■■■□□ 2.12
PAF1-207ENST00000598127 TNS2Q63HR2 1409 aa28.28■■■□□ 2.12
PAF1-207ENST00000598127 RGPD1P0DJD0 1748 aa28.28■■■□□ 2.12
PAF1-207ENST00000598127 OVOS2A0A0G2JMS6 1433 aa28.27■■■□□ 2.12
PAF1-207ENST00000598127 USHBP1Q8N6Y0 703 aa28.27■■■□□ 2.12
PAF1-207ENST00000598127 EIF4A2Q14240 407 aaKnown RBP28.26■■■□□ 2.11
PAF1-207ENST00000598127 SBF2Q86WG5 1849 aa28.25■■■□□ 2.11
PAF1-207ENST00000598127 TRIM37O94972 964 aa28.25■■■□□ 2.11
PAF1-207ENST00000598127 EYA1Q99502 592 aa28.25■■■□□ 2.11
PAF1-207ENST00000598127 RAPGEF4Q8WZA2 1011 aa28.24■■■□□ 2.11
PAF1-207ENST00000598127 MTHFSP49914 203 aa28.23■■■□□ 2.11
PAF1-207ENST00000598127 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
PAF1-207ENST00000598127 BCL9O00512 1426 aa28.23■■■□□ 2.11
PAF1-207ENST00000598127 NCAPD2Q15021 1401 aa28.22■■■□□ 2.11
PAF1-207ENST00000598127 TATP17735 454 aaPredicted RBP28.21■■■□□ 2.11
PAF1-207ENST00000598127 ZCRB1Q8TBF4 217 aaKnown RBP28.21■■■□□ 2.11
PAF1-207ENST00000598127 MEGF6O75095 1541 aa28.21■■■□□ 2.11
PAF1-207ENST00000598127 TNS1Q9HBL0 1735 aaKnown RBP28.21■■■□□ 2.11
PAF1-207ENST00000598127 KAT6BQ8WYB5 2073 aa28.2■■■□□ 2.11
PAF1-207ENST00000598127 BAG6P46379 1132 aa28.2■■■□□ 2.1
PAF1-207ENST00000598127 DEFB132Q7Z7B7 95 aa28.2■■■□□ 2.1
PAF1-207ENST00000598127 DDX54Q8TDD1 881 aaKnown RBP28.17■■■□□ 2.1
PAF1-207ENST00000598127 SHANK3Q9BYB0 1731 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms