RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	NEUROD1	Q13562	356 aa		19.06	■□□□□ 0.64
NPC1-212	ENST00000591107	TCP11L2	Q8N4U5	519 aa		19.06	■□□□□ 0.64
NPC1-212	ENST00000591107	AKAP12	Q02952	1782 aa		19.06	■□□□□ 0.64
NPC1-212	ENST00000591107	APBA3	O96018	575 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	FAM196A	Q6ZSG2	479 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	BARGIN	Q6ZT62	677 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	NLRP13	Q86W25	1043 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	CAMKK2	Q96RR4	588 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	COL18A1	P39060	1754 aa		19.05	■□□□□ 0.64
NPC1-212	ENST00000591107	SOX12	O15370	315 aa		19.04	■□□□□ 0.64
NPC1-212	ENST00000591107	NLRP6	P59044	892 aa		19.04	■□□□□ 0.64
NPC1-212	ENST00000591107	PDE3B	Q13370	1112 aa		19.04	■□□□□ 0.64
NPC1-212	ENST00000591107	ROCK2	O75116	1388 aa	Known RBP	19.04	■□□□□ 0.64
NPC1-212	ENST00000591107	RGPD5	Q99666	1765 aa		19.04	■□□□□ 0.64
NPC1-212	ENST00000591107	PEAK1	Q9H792	1746 aa		19.03	■□□□□ 0.64
NPC1-212	ENST00000591107	CRB1	P82279	1406 aa		19.02	■□□□□ 0.64
NPC1-212	ENST00000591107	SPINK5	Q9NQ38	1064 aa	Predicted RBP	19.01	■□□□□ 0.63
NPC1-212	ENST00000591107	CPSF1	Q10570	1443 aa	Known RBP	19	■□□□□ 0.63
NPC1-212	ENST00000591107	EVC2	Q86UK5	1308 aa		19	■□□□□ 0.63
NPC1-212	ENST00000591107	SBF2	Q86WG5	1849 aa		18.98	■□□□□ 0.63
NPC1-212	ENST00000591107	AATK	Q6ZMQ8	1374 aa		18.98	■□□□□ 0.63
NPC1-212	ENST00000591107	MON2	Q7Z3U7	1717 aa		18.98	■□□□□ 0.63
NPC1-212	ENST00000591107	AXIN2	Q9Y2T1	843 aa		18.98	■□□□□ 0.63
NPC1-212	ENST00000591107	NFAT5	O94916	1531 aa		18.98	■□□□□ 0.63
NPC1-212	ENST00000591107	TOM1L2	Q6ZVM7	507 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	PTF1A	Q7RTS3	328 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	OVOS2	A0A0G2JMS6	1433 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	OVOS2	A0A0J9YW53	1432 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	OVOS2	Q6IE36	1432 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	TTC21B	Q7Z4L5	1316 aa		18.97	■□□□□ 0.63
NPC1-212	ENST00000591107	BRD4	O60885	1362 aa	Predicted RBP	18.96	■□□□□ 0.63
NPC1-212	ENST00000591107	PARD3	Q8TEW0	1356 aa		18.95	■□□□□ 0.62
NPC1-212	ENST00000591107	THRAP3	Q9Y2W1	955 aa	Known RBP	18.95	■□□□□ 0.62
NPC1-212	ENST00000591107	WDR17	Q8IZU2	1322 aa		18.93	■□□□□ 0.62
NPC1-212	ENST00000591107	KTN1	Q86UP2	1357 aa	Known RBP	18.93	■□□□□ 0.62
NPC1-212	ENST00000591107	CAPN15	O75808	1086 aa		18.92	■□□□□ 0.62
NPC1-212	ENST00000591107	CD163L1	Q9NR16	1453 aa		18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	DDB1	Q16531	1140 aa		18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	ARHGEF25	Q86VW2	580 aa		18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	RGPD4	Q7Z3J3	1758 aa		18.91	■□□□□ 0.62
NPC1-212	ENST00000591107	CSB-PGBD3	P0DP91	1061 aa		18.9	■□□□□ 0.62
NPC1-212	ENST00000591107	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.9	■□□□□ 0.62
NPC1-212	ENST00000591107	LTN1	O94822	1766 aa		18.9	■□□□□ 0.62
NPC1-212	ENST00000591107	NME9	Q86XW9	330 aa		18.89	■□□□□ 0.61
NPC1-212	ENST00000591107	MARCH10	Q8NA82	808 aa	Predicted RBP	18.89	■□□□□ 0.61
NPC1-212	ENST00000591107	TTC21A	Q8NDW8	1320 aa		18.88	■□□□□ 0.61
NPC1-212	ENST00000591107	USP54	Q70EL1	1684 aa		18.88	■□□□□ 0.61
NPC1-212	ENST00000591107	CASZ1	Q86V15	1759 aa		18.87	■□□□□ 0.61
NPC1-212	ENST00000591107	SBNO2	Q9Y2G9	1366 aa		18.86	■□□□□ 0.61
NPC1-212	ENST00000591107	CARD11	Q9BXL7	1154 aa		18.86	■□□□□ 0.61
NPC1-212	ENST00000591107	TNS2	Q63HR2	1409 aa		18.85	■□□□□ 0.61
NPC1-212	ENST00000591107	NBPF14	Q5TI25	921 aa		18.85	■□□□□ 0.61
NPC1-212	ENST00000591107	KCNH5	Q8NCM2	988 aa		18.85	■□□□□ 0.61
NPC1-212	ENST00000591107	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.85	■□□□□ 0.61
NPC1-212	ENST00000591107	TMC1	Q8TDI8	760 aa		18.84	■□□□□ 0.61
NPC1-212	ENST00000591107	ZNF692	Q9BU19	519 aa	Predicted RBP	18.84	■□□□□ 0.61
NPC1-212	ENST00000591107	CARD10	Q9BWT7	1032 aa		18.83	■□□□□ 0.6
NPC1-212	ENST00000591107	ABCC6	O95255	1503 aa		18.83	■□□□□ 0.6
NPC1-212	ENST00000591107	NHS	Q6T4R5	1651 aa		18.82	■□□□□ 0.6
NPC1-212	ENST00000591107		A0A1W2PP64	1363 aa		18.82	■□□□□ 0.6
NPC1-212	ENST00000591107	MYOM1	P52179	1685 aa		18.82	■□□□□ 0.6
NPC1-212	ENST00000591107	TONSL	Q96HA7	1378 aa		18.81	■□□□□ 0.6
NPC1-212	ENST00000591107	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.81	■□□□□ 0.6
NPC1-212	ENST00000591107	SLC12A5	Q9H2X9	1139 aa		18.81	■□□□□ 0.6
NPC1-212	ENST00000591107	USP31	Q70CQ4	1352 aa		18.81	■□□□□ 0.6
NPC1-212	ENST00000591107	KCNQ2	O43526	872 aa		18.8	■□□□□ 0.6
NPC1-212	ENST00000591107	PROM2	Q8N271	834 aa		18.8	■□□□□ 0.6
NPC1-212	ENST00000591107	ACSBG1	Q96GR2	724 aa		18.8	■□□□□ 0.6
NPC1-212	ENST00000591107	CCDC7	Q96M83	1385 aa		18.8	■□□□□ 0.6
NPC1-212	ENST00000591107	ERBB3	P21860	1342 aa		18.79	■□□□□ 0.6
NPC1-212	ENST00000591107	POLA2	Q14181	598 aa		18.79	■□□□□ 0.6
NPC1-212	ENST00000591107	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.79	■□□□□ 0.6
NPC1-212	ENST00000591107	SPON1	Q9HCB6	807 aa		18.78	■□□□□ 0.6
NPC1-212	ENST00000591107	NLRP2	Q9NX02	1062 aa		18.78	■□□□□ 0.6
NPC1-212	ENST00000591107	BCL9	O00512	1426 aa		18.77	■□□□□ 0.6
NPC1-212	ENST00000591107	EDC4	Q6P2E9	1401 aa	Known RBP	18.77	■□□□□ 0.6
NPC1-212	ENST00000591107	PLSCR1	O15162	318 aa		18.77	■□□□□ 0.6
NPC1-212	ENST00000591107	ZBTB7A	O95365	584 aa		18.77	■□□□□ 0.6
NPC1-212	ENST00000591107	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.77	■□□□□ 0.6
NPC1-212	ENST00000591107	ANKRD24	Q8TF21	1146 aa		18.76	■□□□□ 0.59
NPC1-212	ENST00000591107	BTAF1	O14981	1849 aa		18.76	■□□□□ 0.59
NPC1-212	ENST00000591107	PAPPA	Q13219	1627 aa		18.75	■□□□□ 0.59
NPC1-212	ENST00000591107	C11orf95	C9JLR9	678 aa	Predicted RBP	18.75	■□□□□ 0.59
NPC1-212	ENST00000591107	EXOC5	O00471	708 aa		18.75	■□□□□ 0.59
NPC1-212	ENST00000591107	TXNRD1	Q16881	649 aa		18.75	■□□□□ 0.59
NPC1-212	ENST00000591107	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.75	■□□□□ 0.59
NPC1-212	ENST00000591107	LTV1	Q96GA3	475 aa	Predicted RBP	18.74	■□□□□ 0.59
NPC1-212	ENST00000591107	RGPD2	P0DJD1	1756 aa		18.73	■□□□□ 0.59
NPC1-212	ENST00000591107	FBLN1	P23142	703 aa		18.73	■□□□□ 0.59
NPC1-212	ENST00000591107	FAM208A	Q9UK61	1670 aa	Known RBP	18.71	■□□□□ 0.59
NPC1-212	ENST00000591107	IL2RB	P14784	551 aa		18.71	■□□□□ 0.59
NPC1-212	ENST00000591107	TESK2	Q96S53	571 aa		18.71	■□□□□ 0.59
NPC1-212	ENST00000591107	NINL	Q9Y2I6	1382 aa		18.7	■□□□□ 0.58
NPC1-212	ENST00000591107	ST20-MTHFS	A0A0A6YYL1	179 aa		18.7	■□□□□ 0.58
NPC1-212	ENST00000591107	MKRN4P	Q13434	485 aa	Predicted RBP	18.7	■□□□□ 0.58
NPC1-212	ENST00000591107	DOT1L	Q8TEK3	1739 aa		18.7	■□□□□ 0.58
NPC1-212	ENST00000591107	SHANK3	Q9BYB0	1731 aa		18.7	■□□□□ 0.58
NPC1-212	ENST00000591107	STK32B	Q9NY57	414 aa		18.7	■□□□□ 0.58

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