RNA–Protein interactions for RNA: ENST00000588806.1

ATP6V0A1-219, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 842 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-219ENST00000588806 RTL1A6NKG5 1358 aa16.12■□□□□ 0.17
ATP6V0A1-219ENST00000588806 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
ATP6V0A1-219ENST00000588806 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
ATP6V0A1-219ENST00000588806 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 STRN4Q9NRL3 753 aa16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
ATP6V0A1-219ENST00000588806 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
ATP6V0A1-219ENST00000588806 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.17
ATP6V0A1-219ENST00000588806 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
ATP6V0A1-219ENST00000588806 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
ATP6V0A1-219ENST00000588806 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 CSB-PGBD3P0DP91 1061 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 HOXC9P31274 260 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 BARGINQ6ZT62 677 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 CDCA7Q9BWT1 371 aaPredicted RBP16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 SPATA31A1Q5TZJ5 1347 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 CRB1P82279 1406 aa16.07■□□□□ 0.16
ATP6V0A1-219ENST00000588806 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 FLT4P35916 1363 aa16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 ERBB3P21860 1342 aa16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 RRS1Q15050 365 aaKnown RBP16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
ATP6V0A1-219ENST00000588806 INSRP06213 1382 aa16.05■□□□□ 0.16
ATP6V0A1-219ENST00000588806 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
ATP6V0A1-219ENST00000588806 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
ATP6V0A1-219ENST00000588806 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
ATP6V0A1-219ENST00000588806 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
ATP6V0A1-219ENST00000588806 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
ATP6V0A1-219ENST00000588806 DDX10Q13206 875 aaKnown RBP16.02■□□□□ 0.16
ATP6V0A1-219ENST00000588806 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
ATP6V0A1-219ENST00000588806 COL18A1P39060 1754 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 FBLN1P23142 703 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 FAM98CQ17RN3 349 aaKnown RBP16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 NLRP2Q9NX02 1062 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 EMILIN1Q9Y6C2 1016 aa16.01■□□□□ 0.15
ATP6V0A1-219ENST00000588806 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
ATP6V0A1-219ENST00000588806 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
ATP6V0A1-219ENST00000588806 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
ATP6V0A1-219ENST00000588806 A0A0G2JS52 829 aa15.98■□□□□ 0.15
ATP6V0A1-219ENST00000588806 GLI3P10071 1580 aa15.98■□□□□ 0.15
ATP6V0A1-219ENST00000588806 MYT1Q01538 1121 aa15.98■□□□□ 0.15
ATP6V0A1-219ENST00000588806 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
ATP6V0A1-219ENST00000588806 RALBP1Q15311 655 aa15.98■□□□□ 0.15
ATP6V0A1-219ENST00000588806 RGS12O14924 1447 aa15.97■□□□□ 0.15
ATP6V0A1-219ENST00000588806 LTV1Q96GA3 475 aaPredicted RBP15.97■□□□□ 0.15
ATP6V0A1-219ENST00000588806 IL2RBP14784 551 aa15.96■□□□□ 0.15
ATP6V0A1-219ENST00000588806 MTHFSP49914 203 aa15.96■□□□□ 0.15
ATP6V0A1-219ENST00000588806 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
ATP6V0A1-219ENST00000588806 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
ATP6V0A1-219ENST00000588806 LTN1O94822 1766 aa15.95■□□□□ 0.14
ATP6V0A1-219ENST00000588806 EXOC5O00471 708 aa15.95■□□□□ 0.14
ATP6V0A1-219ENST00000588806 CFAP53Q96M91 514 aa15.95■□□□□ 0.14
ATP6V0A1-219ENST00000588806 DDB1Q16531 1140 aa15.94■□□□□ 0.14
ATP6V0A1-219ENST00000588806 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
ATP6V0A1-219ENST00000588806 SOCS7O14512 581 aa15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 EIF4A2Q14240 407 aaKnown RBP15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 NBPF6Q5VWK0 638 aa15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 NBPF4Q96M43 638 aa15.93■□□□□ 0.14
ATP6V0A1-219ENST00000588806 PARD3Q8TEW0 1356 aa15.92■□□□□ 0.14
ATP6V0A1-219ENST00000588806 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
ATP6V0A1-219ENST00000588806 DIAPH1O60610 1272 aaKnown RBP15.91■□□□□ 0.14
ATP6V0A1-219ENST00000588806 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
ATP6V0A1-219ENST00000588806 DISP2A7MBM2 1401 aa15.91■□□□□ 0.14
ATP6V0A1-219ENST00000588806 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
ATP6V0A1-219ENST00000588806 FAM196AQ6ZSG2 479 aa15.9■□□□□ 0.14
ATP6V0A1-219ENST00000588806 EYA1Q99502 592 aa15.9■□□□□ 0.14
ATP6V0A1-219ENST00000588806 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
ATP6V0A1-219ENST00000588806 THSD7AQ9UPZ6 1657 aa15.89■□□□□ 0.13
ATP6V0A1-219ENST00000588806 IL13P35225 146 aa15.89■□□□□ 0.13
ATP6V0A1-219ENST00000588806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATP6V0A1-219ENST00000588806 IGSF1Q8N6C5 1336 aa15.89■□□□□ 0.13
ATP6V0A1-219ENST00000588806 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
ATP6V0A1-219ENST00000588806 NCAPD2Q15021 1401 aa15.88■□□□□ 0.13
ATP6V0A1-219ENST00000588806 MAP2P11137 1827 aaKnown RBP15.87■□□□□ 0.13
ATP6V0A1-219ENST00000588806 ZCRB1Q8TBF4 217 aaKnown RBP15.87■□□□□ 0.13
ATP6V0A1-219ENST00000588806 MYBBP1AQ9BQG0 1328 aaKnown RBP15.87■□□□□ 0.13
ATP6V0A1-219ENST00000588806 BCL9O00512 1426 aa15.86■□□□□ 0.13
ATP6V0A1-219ENST00000588806 RGPD5Q99666 1765 aa15.86■□□□□ 0.13
ATP6V0A1-219ENST00000588806 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
ATP6V0A1-219ENST00000588806 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
ATP6V0A1-219ENST00000588806 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
ATP6V0A1-219ENST00000588806 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
ATP6V0A1-219ENST00000588806 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
ATP6V0A1-219ENST00000588806 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
ATP6V0A1-219ENST00000588806 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
ATP6V0A1-219ENST00000588806 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
ATP6V0A1-219ENST00000588806 ANP32CO43423 234 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms