RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
TOP3A-212ENST00000582122 LRP5O75197 1615 aa14.27□□□□□ -0.12
TOP3A-212ENST00000582122 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
TOP3A-212ENST00000582122 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
TOP3A-212ENST00000582122 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
TOP3A-212ENST00000582122 SOX12O15370 315 aa14.27□□□□□ -0.13
TOP3A-212ENST00000582122 GGNBP2Q9H3C7 697 aa14.27□□□□□ -0.13
TOP3A-212ENST00000582122 THRAP3Q9Y2W1 955 aaKnown RBP14.27□□□□□ -0.13
TOP3A-212ENST00000582122 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
TOP3A-212ENST00000582122 ONECUT3O60422 494 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-212ENST00000582122 STRN4Q9NRL3 753 aa14.26□□□□□ -0.13
TOP3A-212ENST00000582122 NRAPQ86VF7 1730 aa14.26□□□□□ -0.13
TOP3A-212ENST00000582122 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
TOP3A-212ENST00000582122 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
TOP3A-212ENST00000582122 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
TOP3A-212ENST00000582122 IP6K1Q92551 441 aa14.25□□□□□ -0.13
TOP3A-212ENST00000582122 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
TOP3A-212ENST00000582122 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-212ENST00000582122 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 WDR17Q8IZU2 1322 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 AMPHP49418 695 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 BARGINQ6ZT62 677 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 SEPT12Q8IYM1 358 aa14.24□□□□□ -0.13
TOP3A-212ENST00000582122 CDCA7Q9BWT1 371 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-212ENST00000582122 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
TOP3A-212ENST00000582122 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
TOP3A-212ENST00000582122 TCP11L2Q8N4U5 519 aa14.23□□□□□ -0.13
TOP3A-212ENST00000582122 CRB1P82279 1406 aa14.23□□□□□ -0.13
TOP3A-212ENST00000582122 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
TOP3A-212ENST00000582122 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
TOP3A-212ENST00000582122 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
TOP3A-212ENST00000582122 BRWD3Q6RI45 1802 aa14.22□□□□□ -0.13
TOP3A-212ENST00000582122 COL18A1P39060 1754 aa14.22□□□□□ -0.13
TOP3A-212ENST00000582122 MAP3K19Q56UN5 1328 aa14.21□□□□□ -0.13
TOP3A-212ENST00000582122 KRT27Q7Z3Y8 459 aa14.21□□□□□ -0.13
TOP3A-212ENST00000582122 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
TOP3A-212ENST00000582122 AXIN2Q9Y2T1 843 aa14.21□□□□□ -0.13
TOP3A-212ENST00000582122 ERBB3P21860 1342 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 A0A0G2JS52 829 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
TOP3A-212ENST00000582122 HOXC9P31274 260 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 BAG6P46379 1132 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 MYT1Q01538 1121 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
TOP3A-212ENST00000582122 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
TOP3A-212ENST00000582122 FLT4P35916 1363 aa14.2□□□□□ -0.14
TOP3A-212ENST00000582122 LTN1O94822 1766 aa14.19□□□□□ -0.14
TOP3A-212ENST00000582122 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-212ENST00000582122 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
TOP3A-212ENST00000582122 ANKRD26Q9UPS8 1709 aa14.18□□□□□ -0.14
TOP3A-212ENST00000582122 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
TOP3A-212ENST00000582122 INSRP06213 1382 aa14.18□□□□□ -0.14
TOP3A-212ENST00000582122 NLRP2Q9NX02 1062 aa14.17□□□□□ -0.14
TOP3A-212ENST00000582122 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
TOP3A-212ENST00000582122 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
TOP3A-212ENST00000582122 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
TOP3A-212ENST00000582122 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
TOP3A-212ENST00000582122 PPM1GO15355 546 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-212ENST00000582122 DISP2A7MBM2 1401 aa14.14□□□□□ -0.15
TOP3A-212ENST00000582122 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
TOP3A-212ENST00000582122 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-212ENST00000582122 TNNT2P45379 298 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-212ENST00000582122 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
TOP3A-212ENST00000582122 RGPD5Q99666 1765 aa14.13□□□□□ -0.15
TOP3A-212ENST00000582122 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
TOP3A-212ENST00000582122 IL2RBP14784 551 aa14.12□□□□□ -0.15
TOP3A-212ENST00000582122 FBLN1P23142 703 aa14.12□□□□□ -0.15
TOP3A-212ENST00000582122 DDB1Q16531 1140 aa14.12□□□□□ -0.15
TOP3A-212ENST00000582122 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
TOP3A-212ENST00000582122 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-212ENST00000582122 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
TOP3A-212ENST00000582122 EXOC5O00471 708 aa14.11□□□□□ -0.15
TOP3A-212ENST00000582122 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
TOP3A-212ENST00000582122 FAM196AQ6ZSG2 479 aa14.11□□□□□ -0.15
TOP3A-212ENST00000582122 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
TOP3A-212ENST00000582122 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
TOP3A-212ENST00000582122 RAPGEF4Q8WZA2 1011 aa14.09□□□□□ -0.15
TOP3A-212ENST00000582122 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-212ENST00000582122 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
TOP3A-212ENST00000582122 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
TOP3A-212ENST00000582122 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
TOP3A-212ENST00000582122 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
TOP3A-212ENST00000582122 PEAK1Q9H792 1746 aa14.07□□□□□ -0.16
TOP3A-212ENST00000582122 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-212ENST00000582122 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-212ENST00000582122 MTHFSP49914 203 aa14.06□□□□□ -0.16
TOP3A-212ENST00000582122 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
TOP3A-212ENST00000582122 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
TOP3A-212ENST00000582122 BCL9O00512 1426 aa14.06□□□□□ -0.16
TOP3A-212ENST00000582122 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
TOP3A-212ENST00000582122 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
TOP3A-212ENST00000582122 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
TOP3A-212ENST00000582122 R3HDM1Q15032 1099 aaKnown RBP14.05□□□□□ -0.16
TOP3A-212ENST00000582122 WNK3Q9BYP7 1800 aa14.05□□□□□ -0.16
TOP3A-212ENST00000582122 RALBP1Q15311 655 aa14.04□□□□□ -0.16
TOP3A-212ENST00000582122 ZCRB1Q8TBF4 217 aaKnown RBP14.04□□□□□ -0.16
TOP3A-212ENST00000582122 EYA1Q99502 592 aa14.04□□□□□ -0.16
TOP3A-212ENST00000582122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
TOP3A-212ENST00000582122 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms