RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 STRN4Q9NRL3 753 aa28.63■■■□□ 2.17
SCO1-204ENST00000579396 RRS1Q15050 365 aaKnown RBP28.62■■■□□ 2.17
SCO1-204ENST00000579396 CC2D1BQ5T0F9 858 aaKnown RBP28.62■■■□□ 2.17
SCO1-204ENST00000579396 GJD4Q96KN9 370 aaPredicted RBP28.62■■■□□ 2.17
SCO1-204ENST00000579396 CCDC9Q9Y3X0 531 aaKnown RBP28.62■■■□□ 2.17
SCO1-204ENST00000579396 ATRNO75882 1429 aa28.61■■■□□ 2.17
SCO1-204ENST00000579396 NWD2Q9ULI1 1742 aa28.61■■■□□ 2.17
SCO1-204ENST00000579396 TNNT2P45379 298 aaPredicted RBP28.6■■■□□ 2.17
SCO1-204ENST00000579396 CAMTA1Q9Y6Y1 1673 aa28.59■■■□□ 2.17
SCO1-204ENST00000579396 KIF24Q5T7B8 1368 aa28.59■■■□□ 2.17
SCO1-204ENST00000579396 HOXC9P31274 260 aa28.58■■■□□ 2.17
SCO1-204ENST00000579396 POLKQ9UBT6 870 aa28.57■■■□□ 2.16
SCO1-204ENST00000579396 ABCC6O95255 1503 aa28.57■■■□□ 2.16
SCO1-204ENST00000579396 PLCH1Q4KWH8 1693 aa28.57■■■□□ 2.16
SCO1-204ENST00000579396 CSB-PGBD3P0DP91 1061 aa28.56■■■□□ 2.16
SCO1-204ENST00000579396 RTL1A6NKG5 1358 aa28.55■■■□□ 2.16
SCO1-204ENST00000579396 SPATA31A5Q5VU36 1347 aa28.55■■■□□ 2.16
SCO1-204ENST00000579396 SPATA31A7Q8IWB4 1347 aa28.55■■■□□ 2.16
SCO1-204ENST00000579396 LARP1Q6PKG0 1096 aaKnown RBP28.55■■■□□ 2.16
SCO1-204ENST00000579396 LMO7Q8WWI1 1683 aa28.54■■■□□ 2.16
SCO1-204ENST00000579396 BLMP54132 1417 aaPredicted RBP28.54■■■□□ 2.16
SCO1-204ENST00000579396 PPM1GO15355 546 aaPredicted RBP28.54■■■□□ 2.16
SCO1-204ENST00000579396 COL18A1P39060 1754 aa28.54■■■□□ 2.16
SCO1-204ENST00000579396 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.54■■■□□ 2.16
SCO1-204ENST00000579396 COL5A2P05997 1499 aaPredicted RBP28.53■■■□□ 2.16
SCO1-204ENST00000579396 WDR17Q8IZU2 1322 aa28.53■■■□□ 2.16
SCO1-204ENST00000579396 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
SCO1-204ENST00000579396 TOM1L2Q6ZVM7 507 aa28.53■■■□□ 2.16
SCO1-204ENST00000579396 ANKRD24Q8TF21 1146 aa28.53■■■□□ 2.16
SCO1-204ENST00000579396 EMILIN1Q9Y6C2 1016 aa28.53■■■□□ 2.16
SCO1-204ENST00000579396 ANKRD26Q9UPS8 1709 aa28.52■■■□□ 2.16
SCO1-204ENST00000579396 FLT4P35916 1363 aa28.51■■■□□ 2.16
SCO1-204ENST00000579396 SPATA31A1Q5TZJ5 1347 aa28.51■■■□□ 2.15
SCO1-204ENST00000579396 THRAP3Q9Y2W1 955 aaKnown RBP28.51■■■□□ 2.15
SCO1-204ENST00000579396 ERBB3P21860 1342 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 ONECUT3O60422 494 aaPredicted RBP28.49■■■□□ 2.15
SCO1-204ENST00000579396 HSP90AB2PQ58FF8 381 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 TCP11L2Q8N4U5 519 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 CARD10Q9BWT7 1032 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 LTN1O94822 1766 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 NRAPQ86VF7 1730 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 INSRP06213 1382 aa28.49■■■□□ 2.15
SCO1-204ENST00000579396 LTV1Q96GA3 475 aaPredicted RBP28.48■■■□□ 2.15
SCO1-204ENST00000579396 USP35Q9P2H5 1018 aa28.48■■■□□ 2.15
SCO1-204ENST00000579396 CRB1P82279 1406 aa28.48■■■□□ 2.15
SCO1-204ENST00000579396 BARGINQ6ZT62 677 aa28.46■■■□□ 2.15
SCO1-204ENST00000579396 NLRP2Q9NX02 1062 aa28.46■■■□□ 2.15
SCO1-204ENST00000579396 MAP2P11137 1827 aaKnown RBP28.44■■■□□ 2.14
SCO1-204ENST00000579396 MTHFSP49914 203 aa28.44■■■□□ 2.14
SCO1-204ENST00000579396 CDK12Q9NYV4 1490 aaPredicted RBP28.44■■■□□ 2.14
SCO1-204ENST00000579396 FAM98CQ17RN3 349 aaKnown RBP28.43■■■□□ 2.14
SCO1-204ENST00000579396 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
SCO1-204ENST00000579396 RALBP1Q15311 655 aa28.41■■■□□ 2.14
SCO1-204ENST00000579396 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
SCO1-204ENST00000579396 SEPT12Q8IYM1 358 aa28.4■■■□□ 2.14
SCO1-204ENST00000579396 CDCA7Q9BWT1 371 aaPredicted RBP28.4■■■□□ 2.14
SCO1-204ENST00000579396 GLI3P10071 1580 aa28.39■■■□□ 2.14
SCO1-204ENST00000579396 A0A0G2JS52 829 aa28.38■■■□□ 2.13
SCO1-204ENST00000579396 MYT1Q01538 1121 aa28.38■■■□□ 2.13
SCO1-204ENST00000579396 PPP2R1AP30153 589 aa28.37■■■□□ 2.13
SCO1-204ENST00000579396 NBPF6Q5VWK0 638 aa28.36■■■□□ 2.13
SCO1-204ENST00000579396 NBPF4Q96M43 638 aa28.36■■■□□ 2.13
SCO1-204ENST00000579396 PEAK1Q9H792 1746 aa28.35■■■□□ 2.13
SCO1-204ENST00000579396 EIF4A2Q14240 407 aaKnown RBP28.35■■■□□ 2.13
SCO1-204ENST00000579396 PARD3Q8TEW0 1356 aa28.35■■■□□ 2.13
SCO1-204ENST00000579396 CFAP53Q96M91 514 aa28.34■■■□□ 2.13
SCO1-204ENST00000579396 RGS12O14924 1447 aa28.32■■■□□ 2.12
SCO1-204ENST00000579396 IL2RBP14784 551 aa28.31■■■□□ 2.12
SCO1-204ENST00000579396 EYA1Q99502 592 aa28.31■■■□□ 2.12
SCO1-204ENST00000579396 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
SCO1-204ENST00000579396 EXOC5O00471 708 aa28.29■■■□□ 2.12
SCO1-204ENST00000579396 IL13P35225 146 aa28.29■■■□□ 2.12
SCO1-204ENST00000579396 KRT27Q7Z3Y8 459 aa28.29■■■□□ 2.12
SCO1-204ENST00000579396 UPF1Q92900 1129 aaKnown RBP eCLIP28.29■■■□□ 2.12
SCO1-204ENST00000579396 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
SCO1-204ENST00000579396 DDB1Q16531 1140 aa28.28■■■□□ 2.12
SCO1-204ENST00000579396 FAM208AQ9UK61 1670 aaKnown RBP28.27■■■□□ 2.12
SCO1-204ENST00000579396 PRKRIP1Q9H875 184 aaPredicted RBP28.27■■■□□ 2.12
SCO1-204ENST00000579396 RAPGEF4Q8WZA2 1011 aa28.26■■■□□ 2.11
SCO1-204ENST00000579396 USHBP1Q8N6Y0 703 aa28.25■■■□□ 2.11
SCO1-204ENST00000579396 NUDCQ9Y266 331 aa28.24■■■□□ 2.11
SCO1-204ENST00000579396 MYBBP1AQ9BQG0 1328 aaKnown RBP28.23■■■□□ 2.11
SCO1-204ENST00000579396 TATP17735 454 aaPredicted RBP28.23■■■□□ 2.11
SCO1-204ENST00000579396 IGSF1Q8N6C5 1336 aa28.22■■■□□ 2.11
SCO1-204ENST00000579396 DISP2A7MBM2 1401 aa28.22■■■□□ 2.11
SCO1-204ENST00000579396 ANP32CO43423 234 aa28.22■■■□□ 2.11
SCO1-204ENST00000579396 THSD7AQ9UPZ6 1657 aa28.2■■■□□ 2.11
SCO1-204ENST00000579396 ZCRB1Q8TBF4 217 aaKnown RBP28.19■■■□□ 2.1
SCO1-204ENST00000579396 SULT6B1Q6IMI4 303 aa28.18■■■□□ 2.1
SCO1-204ENST00000579396 NCAPD2Q15021 1401 aa28.18■■■□□ 2.1
SCO1-204ENST00000579396 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
SCO1-204ENST00000579396 FAM196AQ6ZSG2 479 aa28.16■■■□□ 2.1
SCO1-204ENST00000579396 RGPD2P0DJD1 1756 aa28.16■■■□□ 2.1
SCO1-204ENST00000579396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.15■■■□□ 2.1
SCO1-204ENST00000579396 SPG7Q9UQ90 795 aa28.14■■■□□ 2.1
SCO1-204ENST00000579396 PARP4Q9UKK3 1724 aaKnown RBP28.13■■■□□ 2.09
SCO1-204ENST00000579396 MARCH10Q8NA82 808 aaPredicted RBP28.12■■■□□ 2.09
SCO1-204ENST00000579396 COL3A1P02461 1466 aaPredicted RBP28.12■■■□□ 2.09
SCO1-204ENST00000579396 PLEKHG2Q9H7P9 1386 aa28.11■■■□□ 2.09
SCO1-204ENST00000579396 OVOS2A0A0G2JMS6 1433 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms