RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 PROM2Q8N271 834 aa17.83■□□□□ 0.44
SSH2-207ENST00000578411 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
SSH2-207ENST00000578411 PAPPAQ13219 1627 aa17.83■□□□□ 0.44
SSH2-207ENST00000578411 BCL9O00512 1426 aa17.82■□□□□ 0.44
SSH2-207ENST00000578411 USP19O94966 1318 aa17.82■□□□□ 0.44
SSH2-207ENST00000578411 SLC15A2Q16348 729 aa17.82■□□□□ 0.44
SSH2-207ENST00000578411 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
SSH2-207ENST00000578411 ARXQ96QS3 562 aa17.82■□□□□ 0.44
SSH2-207ENST00000578411 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
SSH2-207ENST00000578411 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
SSH2-207ENST00000578411 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
SSH2-207ENST00000578411 DDB1Q16531 1140 aa17.81■□□□□ 0.44
SSH2-207ENST00000578411 GPR162Q16538 588 aa17.81■□□□□ 0.44
SSH2-207ENST00000578411 TXNRD1Q16881 649 aa17.8■□□□□ 0.44
SSH2-207ENST00000578411 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
SSH2-207ENST00000578411 NUDT16Q96DE0 195 aaKnown RBP17.77■□□□□ 0.44
SSH2-207ENST00000578411 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
SSH2-207ENST00000578411 PELP1Q8IZL8 1130 aaKnown RBP17.75■□□□□ 0.43
SSH2-207ENST00000578411 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
SSH2-207ENST00000578411 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
SSH2-207ENST00000578411 ACEP12821 1306 aa17.74■□□□□ 0.43
SSH2-207ENST00000578411 SLIT3O75094 1523 aa17.73■□□□□ 0.43
SSH2-207ENST00000578411 COL24A1Q17RW2 1714 aa17.73■□□□□ 0.43
SSH2-207ENST00000578411 GCP02774 474 aa17.73■□□□□ 0.43
SSH2-207ENST00000578411 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
SSH2-207ENST00000578411 QSER1Q2KHR3 1735 aa17.72■□□□□ 0.43
SSH2-207ENST00000578411 GOLGB1Q14789 3259 aaKnown RBP17.72■□□□□ 0.43
SSH2-207ENST00000578411 COL18A1P39060 1754 aa17.72■□□□□ 0.43
SSH2-207ENST00000578411 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
SSH2-207ENST00000578411 TOM1L2Q6ZVM7 507 aa17.72■□□□□ 0.43
SSH2-207ENST00000578411 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
SSH2-207ENST00000578411 ATP10DQ9P241 1426 aa17.71■□□□□ 0.43
SSH2-207ENST00000578411 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
SSH2-207ENST00000578411 TNS2Q63HR2 1409 aa17.7■□□□□ 0.42
SSH2-207ENST00000578411 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
SSH2-207ENST00000578411 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
SSH2-207ENST00000578411 ABCC6O95255 1503 aa17.68■□□□□ 0.42
SSH2-207ENST00000578411 BTAF1O14981 1849 aa17.68■□□□□ 0.42
SSH2-207ENST00000578411 HSPA6P17066 643 aa17.68■□□□□ 0.42
SSH2-207ENST00000578411 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
SSH2-207ENST00000578411 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
SSH2-207ENST00000578411 CDK19Q9BWU1 502 aa17.67■□□□□ 0.42
SSH2-207ENST00000578411 CCDC61Q9Y6R9 512 aa17.67■□□□□ 0.42
SSH2-207ENST00000578411 CPSF1Q10570 1443 aaKnown RBP17.66■□□□□ 0.42
SSH2-207ENST00000578411 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
SSH2-207ENST00000578411 POLD1P28340 1107 aa17.66■□□□□ 0.42
SSH2-207ENST00000578411 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
SSH2-207ENST00000578411 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
SSH2-207ENST00000578411 RGPD5Q99666 1765 aa17.65■□□□□ 0.42
SSH2-207ENST00000578411 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
SSH2-207ENST00000578411 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.42
SSH2-207ENST00000578411 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.42
SSH2-207ENST00000578411 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
SSH2-207ENST00000578411 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
SSH2-207ENST00000578411 YBX3P16989 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSH2-207ENST00000578411 GPBP1L1Q9HC44 474 aaPredicted RBP17.62■□□□□ 0.41
SSH2-207ENST00000578411 ADCY9O60503 1353 aa17.61■□□□□ 0.41
SSH2-207ENST00000578411 USP6P35125 1406 aa17.61■□□□□ 0.41
SSH2-207ENST00000578411 EXOC5O00471 708 aa17.6■□□□□ 0.41
SSH2-207ENST00000578411 SLC16A10Q8TF71 515 aa17.6■□□□□ 0.41
SSH2-207ENST00000578411 ACSBG1Q96GR2 724 aa17.6■□□□□ 0.41
SSH2-207ENST00000578411 CCDC7Q96M83 1385 aa17.59■□□□□ 0.41
SSH2-207ENST00000578411 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
SSH2-207ENST00000578411 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
SSH2-207ENST00000578411 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
SSH2-207ENST00000578411 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
SSH2-207ENST00000578411 NLRP6P59044 892 aa17.58■□□□□ 0.4
SSH2-207ENST00000578411 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
SSH2-207ENST00000578411 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
SSH2-207ENST00000578411 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
SSH2-207ENST00000578411 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
SSH2-207ENST00000578411 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
SSH2-207ENST00000578411 NFAT5O94916 1531 aa17.54■□□□□ 0.4
SSH2-207ENST00000578411 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
SSH2-207ENST00000578411 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
SSH2-207ENST00000578411 ARHGEF25Q86VW2 580 aa17.52■□□□□ 0.4
SSH2-207ENST00000578411 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
SSH2-207ENST00000578411 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
SSH2-207ENST00000578411 LY75O60449 1722 aa17.5■□□□□ 0.39
SSH2-207ENST00000578411 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
SSH2-207ENST00000578411 SOX12O15370 315 aa17.49■□□□□ 0.39
SSH2-207ENST00000578411 APLP1P51693 650 aa17.49■□□□□ 0.39
SSH2-207ENST00000578411 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
SSH2-207ENST00000578411 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
SSH2-207ENST00000578411 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
SSH2-207ENST00000578411 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
SSH2-207ENST00000578411 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
SSH2-207ENST00000578411 CAPN15O75808 1086 aa17.46■□□□□ 0.39
SSH2-207ENST00000578411 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
SSH2-207ENST00000578411 KIF3CO14782 793 aa17.45■□□□□ 0.38
SSH2-207ENST00000578411 IL2RBP14784 551 aa17.45■□□□□ 0.38
SSH2-207ENST00000578411 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
SSH2-207ENST00000578411 ERBB3P21860 1342 aa17.45■□□□□ 0.38
SSH2-207ENST00000578411 LTN1O94822 1766 aa17.44■□□□□ 0.38
SSH2-207ENST00000578411 KCNQ4P56696 695 aa17.43■□□□□ 0.38
SSH2-207ENST00000578411 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
SSH2-207ENST00000578411 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
SSH2-207ENST00000578411 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
SSH2-207ENST00000578411 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
SSH2-207ENST00000578411 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms