RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 MTHFSP49914 203 aa18.7■□□□□ 0.58
LINC01543-201ENST00000578367 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
LINC01543-201ENST00000578367 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
LINC01543-201ENST00000578367 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
LINC01543-201ENST00000578367 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
LINC01543-201ENST00000578367 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
LINC01543-201ENST00000578367 BTG4Q9NY30 223 aa18.7■□□□□ 0.58
LINC01543-201ENST00000578367 FBLN1P23142 703 aa18.69■□□□□ 0.58
LINC01543-201ENST00000578367 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
LINC01543-201ENST00000578367 ERBB3P21860 1342 aa18.68■□□□□ 0.58
LINC01543-201ENST00000578367 AFF2P51816 1311 aa18.68■□□□□ 0.58
LINC01543-201ENST00000578367 LMO7Q8WWI1 1683 aa18.67■□□□□ 0.58
LINC01543-201ENST00000578367 BCL9LQ86UU0 1499 aa18.67■□□□□ 0.58
LINC01543-201ENST00000578367 ZBTB7CA1YPR0 619 aa18.67■□□□□ 0.58
LINC01543-201ENST00000578367 EVA1CP58658 441 aa18.67■□□□□ 0.58
LINC01543-201ENST00000578367 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
LINC01543-201ENST00000578367 USP21Q9UK80 565 aa18.67■□□□□ 0.58
LINC01543-201ENST00000578367 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
LINC01543-201ENST00000578367 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
LINC01543-201ENST00000578367 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
LINC01543-201ENST00000578367 VPS72Q15906 364 aa18.66■□□□□ 0.58
LINC01543-201ENST00000578367 WDR17Q8IZU2 1322 aa18.66■□□□□ 0.58
LINC01543-201ENST00000578367 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
LINC01543-201ENST00000578367 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
LINC01543-201ENST00000578367 TRPC5Q9UL62 973 aaPredicted RBP18.65■□□□□ 0.58
LINC01543-201ENST00000578367 NWD2Q9ULI1 1742 aa18.65■□□□□ 0.58
LINC01543-201ENST00000578367 COL18A1P39060 1754 aa18.65■□□□□ 0.58
LINC01543-201ENST00000578367 DIAPH1O60610 1272 aaKnown RBP18.63■□□□□ 0.57
LINC01543-201ENST00000578367 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
LINC01543-201ENST00000578367 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
LINC01543-201ENST00000578367 CSB-PGBD3P0DP91 1061 aa18.62■□□□□ 0.57
LINC01543-201ENST00000578367 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
LINC01543-201ENST00000578367 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
LINC01543-201ENST00000578367 CRB1P82279 1406 aa18.62■□□□□ 0.57
LINC01543-201ENST00000578367 ATRNO75882 1429 aa18.61■□□□□ 0.57
LINC01543-201ENST00000578367 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
LINC01543-201ENST00000578367 EIF4A2Q14240 407 aaKnown RBP18.61■□□□□ 0.57
LINC01543-201ENST00000578367 LTN1O94822 1766 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 SPATA31A5Q5VU36 1347 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 SPATA31A7Q8IWB4 1347 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 IL13P35225 146 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.6■□□□□ 0.57
LINC01543-201ENST00000578367 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
LINC01543-201ENST00000578367 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
LINC01543-201ENST00000578367 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
LINC01543-201ENST00000578367 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
LINC01543-201ENST00000578367 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
LINC01543-201ENST00000578367 QTRT2Q9H974 415 aaKnown RBP18.59■□□□□ 0.57
LINC01543-201ENST00000578367 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
LINC01543-201ENST00000578367 SPATA31A1Q5TZJ5 1347 aa18.58■□□□□ 0.57
LINC01543-201ENST00000578367 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
LINC01543-201ENST00000578367 BARGINQ6ZT62 677 aa18.58■□□□□ 0.56
LINC01543-201ENST00000578367 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.56
LINC01543-201ENST00000578367 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.56
LINC01543-201ENST00000578367 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.56
LINC01543-201ENST00000578367 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
LINC01543-201ENST00000578367 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
LINC01543-201ENST00000578367 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
LINC01543-201ENST00000578367 LTV1Q96GA3 475 aaPredicted RBP18.56■□□□□ 0.56
LINC01543-201ENST00000578367 EYA1Q99502 592 aa18.56■□□□□ 0.56
LINC01543-201ENST00000578367 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
LINC01543-201ENST00000578367 FAM208AQ9UK61 1670 aaKnown RBP18.55■□□□□ 0.56
LINC01543-201ENST00000578367 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
LINC01543-201ENST00000578367 RBM6P78332 1123 aaKnown RBP18.55■□□□□ 0.56
LINC01543-201ENST00000578367 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
LINC01543-201ENST00000578367 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
LINC01543-201ENST00000578367 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
LINC01543-201ENST00000578367 CCDC9Q9Y3X0 531 aaKnown RBP18.54■□□□□ 0.56
LINC01543-201ENST00000578367 KDRP35968 1356 aa18.54■□□□□ 0.56
LINC01543-201ENST00000578367 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
LINC01543-201ENST00000578367 FCHSD2O94868 740 aa18.52■□□□□ 0.56
LINC01543-201ENST00000578367 RXRBP28702 533 aa18.52■□□□□ 0.56
LINC01543-201ENST00000578367 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
LINC01543-201ENST00000578367 IL2RBP14784 551 aa18.5■□□□□ 0.55
LINC01543-201ENST00000578367 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
LINC01543-201ENST00000578367 MRS2Q9HD23 443 aa18.5■□□□□ 0.55
LINC01543-201ENST00000578367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC01543-201ENST00000578367 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
LINC01543-201ENST00000578367 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
LINC01543-201ENST00000578367 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.55
LINC01543-201ENST00000578367 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
LINC01543-201ENST00000578367 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
LINC01543-201ENST00000578367 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
LINC01543-201ENST00000578367 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
LINC01543-201ENST00000578367 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
LINC01543-201ENST00000578367 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
LINC01543-201ENST00000578367 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
LINC01543-201ENST00000578367 MIER1Q8N108 512 aa18.46■□□□□ 0.55
LINC01543-201ENST00000578367 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
LINC01543-201ENST00000578367 RGPD5Q99666 1765 aa18.45■□□□□ 0.54
LINC01543-201ENST00000578367 FAM98CQ17RN3 349 aaKnown RBP18.45■□□□□ 0.54
LINC01543-201ENST00000578367 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
LINC01543-201ENST00000578367 GLI3P10071 1580 aa18.45■□□□□ 0.54
LINC01543-201ENST00000578367 EXOC5O00471 708 aa18.44■□□□□ 0.54
LINC01543-201ENST00000578367 NEFMP07197 916 aa18.44■□□□□ 0.54
LINC01543-201ENST00000578367 USHBP1Q8N6Y0 703 aa18.44■□□□□ 0.54
LINC01543-201ENST00000578367 RSPH6AQ9H0K4 717 aa18.44■□□□□ 0.54
LINC01543-201ENST00000578367 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
LINC01543-201ENST00000578367 PLEKHO1Q53GL0 409 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms