RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
CDRT1-206ENST00000571263 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.12
CDRT1-206ENST00000571263 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
CDRT1-206ENST00000571263 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
CDRT1-206ENST00000571263 LTN1O94822 1766 aa15.81■□□□□ 0.12
CDRT1-206ENST00000571263 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
CDRT1-206ENST00000571263 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
CDRT1-206ENST00000571263 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
CDRT1-206ENST00000571263 CRYBG1Q9Y4K1 1723 aa15.81■□□□□ 0.12
CDRT1-206ENST00000571263 SHPRHQ149N8 1683 aa15.8■□□□□ 0.12
CDRT1-206ENST00000571263 JCADQ9P266 1359 aa15.8■□□□□ 0.12
CDRT1-206ENST00000571263 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
CDRT1-206ENST00000571263 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDRT1-206ENST00000571263 PRDM11Q9NQV5 511 aa15.79■□□□□ 0.12
CDRT1-206ENST00000571263 KIAA0232Q92628 1395 aa15.78■□□□□ 0.12
CDRT1-206ENST00000571263 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
CDRT1-206ENST00000571263 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
CDRT1-206ENST00000571263 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
CDRT1-206ENST00000571263 SPATA31A6Q5VVP1 1343 aa15.77■□□□□ 0.12
CDRT1-206ENST00000571263 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
CDRT1-206ENST00000571263 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
CDRT1-206ENST00000571263 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
CDRT1-206ENST00000571263 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
CDRT1-206ENST00000571263 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
CDRT1-206ENST00000571263 ZBED9Q6R2W3 1325 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
CDRT1-206ENST00000571263 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 EYA1Q99502 592 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 RSPH6AQ9H0K4 717 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 AXIN2Q9Y2T1 843 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 KDRP35968 1356 aa15.74■□□□□ 0.11
CDRT1-206ENST00000571263 ERBB3P21860 1342 aa15.73■□□□□ 0.11
CDRT1-206ENST00000571263 COL18A1P39060 1754 aa15.73■□□□□ 0.11
CDRT1-206ENST00000571263 LTV1Q96GA3 475 aaPredicted RBP15.73■□□□□ 0.11
CDRT1-206ENST00000571263 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
CDRT1-206ENST00000571263 RGPD1P0DJD0 1748 aa15.72■□□□□ 0.11
CDRT1-206ENST00000571263 CSB-PGBD3P0DP91 1061 aa15.72■□□□□ 0.11
CDRT1-206ENST00000571263 PRKAR2BP31323 418 aa15.72■□□□□ 0.11
CDRT1-206ENST00000571263 EVA1CP58658 441 aa15.72■□□□□ 0.11
CDRT1-206ENST00000571263 PDE3BQ13370 1112 aa15.72■□□□□ 0.11
CDRT1-206ENST00000571263 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
CDRT1-206ENST00000571263 FAM83GA6ND36 823 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 APAF1O14727 1248 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 HMOX1P09601 288 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 HSPA1LP34931 641 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 TCP11L2Q8N4U5 519 aa15.71■□□□□ 0.11
CDRT1-206ENST00000571263 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
CDRT1-206ENST00000571263 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
CDRT1-206ENST00000571263 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
CDRT1-206ENST00000571263 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
CDRT1-206ENST00000571263 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
CDRT1-206ENST00000571263 LMO7Q8WWI1 1683 aa15.69■□□□□ 0.1
CDRT1-206ENST00000571263 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
CDRT1-206ENST00000571263 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
CDRT1-206ENST00000571263 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
CDRT1-206ENST00000571263 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
CDRT1-206ENST00000571263 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
CDRT1-206ENST00000571263 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
CDRT1-206ENST00000571263 CAMTA1Q9Y6Y1 1673 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 COL5A2P05997 1499 aaPredicted RBP15.67■□□□□ 0.1
CDRT1-206ENST00000571263 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
CDRT1-206ENST00000571263 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 TOM1L2Q6ZVM7 507 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 GAS2L2Q8NHY3 880 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 CARD10Q9BWT7 1032 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 BTG4Q9NY30 223 aa15.67■□□□□ 0.1
CDRT1-206ENST00000571263 ADAMTS2O95450 1211 aa15.66■□□□□ 0.1
CDRT1-206ENST00000571263 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
CDRT1-206ENST00000571263 FBXO41Q8TF61 875 aa15.66■□□□□ 0.1
CDRT1-206ENST00000571263 HTATSF1O43719 755 aaKnown RBP15.65■□□□□ 0.1
CDRT1-206ENST00000571263 RIPK4P57078 832 aa15.65■□□□□ 0.1
CDRT1-206ENST00000571263 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
CDRT1-206ENST00000571263 PLEKHO1Q53GL0 409 aaPredicted RBP15.65■□□□□ 0.1
CDRT1-206ENST00000571263 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
CDRT1-206ENST00000571263 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
CDRT1-206ENST00000571263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDRT1-206ENST00000571263 RGPD5Q99666 1765 aa15.64■□□□□ 0.1
CDRT1-206ENST00000571263 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
CDRT1-206ENST00000571263 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
CDRT1-206ENST00000571263 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
CDRT1-206ENST00000571263 CRB1P82279 1406 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 STRN4Q9NRL3 753 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
CDRT1-206ENST00000571263 NWD2Q9ULI1 1742 aa15.63■□□□□ 0.09
CDRT1-206ENST00000571263 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
CDRT1-206ENST00000571263 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
CDRT1-206ENST00000571263 CDCA7Q9BWT1 371 aaPredicted RBP15.62■□□□□ 0.09
CDRT1-206ENST00000571263 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
CDRT1-206ENST00000571263 ZNF521Q96K83 1311 aa15.62■□□□□ 0.09
CDRT1-206ENST00000571263 MEX3CQ5U5Q3 659 aaKnown RBP15.61■□□□□ 0.09
CDRT1-206ENST00000571263 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
CDRT1-206ENST00000571263 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
CDRT1-206ENST00000571263 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms