RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
TVP23B-204ENST00000571018 ARHGEF25Q86VW2 580 aa17.66■□□□□ 0.42
TVP23B-204ENST00000571018 SEPT12Q8IYM1 358 aa17.66■□□□□ 0.42
TVP23B-204ENST00000571018 USP54Q70EL1 1684 aa17.65■□□□□ 0.42
TVP23B-204ENST00000571018 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
TVP23B-204ENST00000571018 NFAT5O94916 1531 aa17.64■□□□□ 0.41
TVP23B-204ENST00000571018 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
TVP23B-204ENST00000571018 SOX12O15370 315 aa17.64■□□□□ 0.41
TVP23B-204ENST00000571018 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
TVP23B-204ENST00000571018 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
TVP23B-204ENST00000571018 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
TVP23B-204ENST00000571018 OVOS2A0A0J9YW53 1432 aa17.63■□□□□ 0.41
TVP23B-204ENST00000571018 OVOS2Q6IE36 1432 aa17.63■□□□□ 0.41
TVP23B-204ENST00000571018 COL18A1P39060 1754 aa17.62■□□□□ 0.41
TVP23B-204ENST00000571018 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
TVP23B-204ENST00000571018 A0A0G2JS52 829 aa17.6■□□□□ 0.41
TVP23B-204ENST00000571018 MYT1Q01538 1121 aa17.6■□□□□ 0.41
TVP23B-204ENST00000571018 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
TVP23B-204ENST00000571018 MYOM1P52179 1685 aa17.6■□□□□ 0.41
TVP23B-204ENST00000571018 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
TVP23B-204ENST00000571018 COG3Q96JB2 828 aa17.59■□□□□ 0.41
TVP23B-204ENST00000571018 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
TVP23B-204ENST00000571018 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.41
TVP23B-204ENST00000571018 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.41
TVP23B-204ENST00000571018 ABCC6O95255 1503 aa17.58■□□□□ 0.41
TVP23B-204ENST00000571018 CRB1P82279 1406 aa17.58■□□□□ 0.41
TVP23B-204ENST00000571018 FYB1O15117 783 aa17.58■□□□□ 0.4
TVP23B-204ENST00000571018 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
TVP23B-204ENST00000571018 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
TVP23B-204ENST00000571018 THRAP3Q9Y2W1 955 aaKnown RBP17.58■□□□□ 0.4
TVP23B-204ENST00000571018 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
TVP23B-204ENST00000571018 C1QBPQ07021 282 aaKnown RBP17.56■□□□□ 0.4
TVP23B-204ENST00000571018 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
TVP23B-204ENST00000571018 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
TVP23B-204ENST00000571018 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
TVP23B-204ENST00000571018 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
TVP23B-204ENST00000571018 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-204ENST00000571018 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-204ENST00000571018 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
TVP23B-204ENST00000571018 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
TVP23B-204ENST00000571018 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
TVP23B-204ENST00000571018 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
TVP23B-204ENST00000571018 LTN1O94822 1766 aa17.52■□□□□ 0.4
TVP23B-204ENST00000571018 ERBB3P21860 1342 aa17.51■□□□□ 0.39
TVP23B-204ENST00000571018 FBLN1P23142 703 aa17.51■□□□□ 0.39
TVP23B-204ENST00000571018 BLMP54132 1417 aaPredicted RBP17.51■□□□□ 0.39
TVP23B-204ENST00000571018 IP6K1Q92551 441 aa17.51■□□□□ 0.39
TVP23B-204ENST00000571018 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
TVP23B-204ENST00000571018 CGNL1Q0VF96 1302 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 FAM182BQ5T319 152 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 PANK3Q9H999 370 aa17.49■□□□□ 0.39
TVP23B-204ENST00000571018 ATXN8OSP0DMR3 200 aa17.48■□□□□ 0.39
TVP23B-204ENST00000571018 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
TVP23B-204ENST00000571018 CCDC7Q96M83 1385 aa17.48■□□□□ 0.39
TVP23B-204ENST00000571018 HOXC9P31274 260 aa17.47■□□□□ 0.39
TVP23B-204ENST00000571018 AMPHP49418 695 aa17.47■□□□□ 0.39
TVP23B-204ENST00000571018 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
TVP23B-204ENST00000571018 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
TVP23B-204ENST00000571018 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
TVP23B-204ENST00000571018 FAM196AQ6ZSG2 479 aa17.46■□□□□ 0.39
TVP23B-204ENST00000571018 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
TVP23B-204ENST00000571018 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
TVP23B-204ENST00000571018 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
TVP23B-204ENST00000571018 DDB1Q16531 1140 aa17.45■□□□□ 0.38
TVP23B-204ENST00000571018 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
TVP23B-204ENST00000571018 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
TVP23B-204ENST00000571018 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
TVP23B-204ENST00000571018 WNK3Q9BYP7 1800 aa17.42■□□□□ 0.38
TVP23B-204ENST00000571018 LTV1Q96GA3 475 aaPredicted RBP17.42■□□□□ 0.38
TVP23B-204ENST00000571018 DEFB132Q7Z7B7 95 aa17.41■□□□□ 0.38
TVP23B-204ENST00000571018 FLT4P35916 1363 aa17.4■□□□□ 0.38
TVP23B-204ENST00000571018 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
TVP23B-204ENST00000571018 EXOC5O00471 708 aa17.4■□□□□ 0.38
TVP23B-204ENST00000571018 IL2RBP14784 551 aa17.4■□□□□ 0.38
TVP23B-204ENST00000571018 NSD2O96028 1365 aa17.4■□□□□ 0.38
TVP23B-204ENST00000571018 INSRP06213 1382 aa17.4■□□□□ 0.38
TVP23B-204ENST00000571018 EP400Q96L91 3159 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 TRIM37O94972 964 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 BAG6P46379 1132 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 HSP90AB2PQ58FF8 381 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 EMILIN1Q9Y6C2 1016 aa17.39■□□□□ 0.37
TVP23B-204ENST00000571018 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
TVP23B-204ENST00000571018 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
TVP23B-204ENST00000571018 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
TVP23B-204ENST00000571018 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
TVP23B-204ENST00000571018 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
TVP23B-204ENST00000571018 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
TVP23B-204ENST00000571018 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
TVP23B-204ENST00000571018 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
TVP23B-204ENST00000571018 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
TVP23B-204ENST00000571018 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
TVP23B-204ENST00000571018 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
TVP23B-204ENST00000571018 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
TVP23B-204ENST00000571018 BCL9O00512 1426 aa17.36■□□□□ 0.37
TVP23B-204ENST00000571018 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
TVP23B-204ENST00000571018 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 589.7 ms