RNA–Protein interactions for RNA: ENST00000570954.1

RPH3AL-206, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-206ENST00000570954 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
RPH3AL-206ENST00000570954 LRP6O75581 1613 aa16.52■□□□□ 0.23
RPH3AL-206ENST00000570954 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 ZNF772Q68DY9 489 aaPredicted RBP16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 INSRP06213 1382 aa16.51■□□□□ 0.23
RPH3AL-206ENST00000570954 UNC5CLQ8IV45 518 aa16.5■□□□□ 0.23
RPH3AL-206ENST00000570954 FBLN1P23142 703 aa16.49■□□□□ 0.23
RPH3AL-206ENST00000570954 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
RPH3AL-206ENST00000570954 USP21Q9UK80 565 aa16.49■□□□□ 0.23
RPH3AL-206ENST00000570954 SLIT2O94813 1529 aa16.49■□□□□ 0.23
RPH3AL-206ENST00000570954 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
RPH3AL-206ENST00000570954 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
RPH3AL-206ENST00000570954 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
RPH3AL-206ENST00000570954 AFF2P51816 1311 aa16.47■□□□□ 0.23
RPH3AL-206ENST00000570954 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
RPH3AL-206ENST00000570954 ERBB3P21860 1342 aa16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 HSP90AB2PQ58FF8 381 aa16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 TRPC5Q9UL62 973 aaPredicted RBP16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 AXIN2Q9Y2T1 843 aa16.46■□□□□ 0.23
RPH3AL-206ENST00000570954 LTN1O94822 1766 aa16.46■□□□□ 0.22
RPH3AL-206ENST00000570954 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
RPH3AL-206ENST00000570954 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
RPH3AL-206ENST00000570954 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
RPH3AL-206ENST00000570954 LMO7Q8WWI1 1683 aa16.44■□□□□ 0.22
RPH3AL-206ENST00000570954 CAMTA1Q9Y6Y1 1673 aa16.44■□□□□ 0.22
RPH3AL-206ENST00000570954 COL5A2P05997 1499 aaPredicted RBP16.44■□□□□ 0.22
RPH3AL-206ENST00000570954 VPS72Q15906 364 aa16.44■□□□□ 0.22
RPH3AL-206ENST00000570954 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
RPH3AL-206ENST00000570954 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
RPH3AL-206ENST00000570954 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
RPH3AL-206ENST00000570954 COL18A1P39060 1754 aa16.43■□□□□ 0.22
RPH3AL-206ENST00000570954 CRB1P82279 1406 aa16.43■□□□□ 0.22
RPH3AL-206ENST00000570954 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
RPH3AL-206ENST00000570954 LTV1Q96GA3 475 aaPredicted RBP16.42■□□□□ 0.22
RPH3AL-206ENST00000570954 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
RPH3AL-206ENST00000570954 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
RPH3AL-206ENST00000570954 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
RPH3AL-206ENST00000570954 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
RPH3AL-206ENST00000570954 CDCA7Q9BWT1 371 aaPredicted RBP16.41■□□□□ 0.22
RPH3AL-206ENST00000570954 QTRT2Q9H974 415 aaKnown RBP16.41■□□□□ 0.22
RPH3AL-206ENST00000570954 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.4■□□□□ 0.22
RPH3AL-206ENST00000570954 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
RPH3AL-206ENST00000570954 IL13P35225 146 aa16.4■□□□□ 0.22
RPH3AL-206ENST00000570954 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
RPH3AL-206ENST00000570954 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
RPH3AL-206ENST00000570954 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 TCP11L2Q8N4U5 519 aa16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
RPH3AL-206ENST00000570954 ATRNO75882 1429 aa16.38■□□□□ 0.21
RPH3AL-206ENST00000570954 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
RPH3AL-206ENST00000570954 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 EYA1Q99502 592 aa16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 MRS2Q9HD23 443 aa16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 PLEKHG2Q9H7P9 1386 aa16.37■□□□□ 0.21
RPH3AL-206ENST00000570954 NEFMP07197 916 aa16.36■□□□□ 0.21
RPH3AL-206ENST00000570954 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
RPH3AL-206ENST00000570954 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
RPH3AL-206ENST00000570954 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
RPH3AL-206ENST00000570954 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
RPH3AL-206ENST00000570954 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
RPH3AL-206ENST00000570954 RXRBP28702 533 aa16.35■□□□□ 0.21
RPH3AL-206ENST00000570954 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPH3AL-206ENST00000570954 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
RPH3AL-206ENST00000570954 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
RPH3AL-206ENST00000570954 FCHSD2O94868 740 aa16.34■□□□□ 0.21
RPH3AL-206ENST00000570954 IL2RBP14784 551 aa16.34■□□□□ 0.21
RPH3AL-206ENST00000570954 RGPD5Q99666 1765 aa16.33■□□□□ 0.21
RPH3AL-206ENST00000570954 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
RPH3AL-206ENST00000570954 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
RPH3AL-206ENST00000570954 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
RPH3AL-206ENST00000570954 KDRP35968 1356 aa16.31■□□□□ 0.2
RPH3AL-206ENST00000570954 ONECUT3O60422 494 aaPredicted RBP16.31■□□□□ 0.2
RPH3AL-206ENST00000570954 MIER1Q8N108 512 aa16.31■□□□□ 0.2
RPH3AL-206ENST00000570954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.23e-7■□□□□ 8.4
RPH3AL-206ENST00000570954 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
RPH3AL-206ENST00000570954 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
RPH3AL-206ENST00000570954 A0A0G2JS52 829 aa16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 EXOC5O00471 708 aa16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 MYT1Q01538 1121 aa16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 FAM98CQ17RN3 349 aaKnown RBP16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
RPH3AL-206ENST00000570954 HMOX1P09601 288 aa16.28■□□□□ 0.2
RPH3AL-206ENST00000570954 DDB1Q16531 1140 aa16.28■□□□□ 0.2
RPH3AL-206ENST00000570954 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
RPH3AL-206ENST00000570954 PNISRQ8TF01 805 aaKnown RBP16.28■□□□□ 0.2
RPH3AL-206ENST00000570954 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
RPH3AL-206ENST00000570954 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms