RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 USP17L1Q7RTZ2 530 aa10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 CHD1O14646 1710 aa10.89□□□□□ -0.67
HERPUD1-214ENST00000568651 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
HERPUD1-214ENST00000568651 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
HERPUD1-214ENST00000568651 ADH1BP00325 375 aa10.88□□□□□ -0.67
HERPUD1-214ENST00000568651 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
HERPUD1-214ENST00000568651 CEP126Q9P2H0 1117 aa10.87□□□□□ -0.67
HERPUD1-214ENST00000568651 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
HERPUD1-214ENST00000568651 SKIP12755 728 aa10.86□□□□□ -0.67
HERPUD1-214ENST00000568651 CHIC2Q9UKJ5 165 aa10.86□□□□□ -0.67
HERPUD1-214ENST00000568651 DNMBPQ6XZF7 1577 aa10.86□□□□□ -0.67
HERPUD1-214ENST00000568651 ZPR1O75312 459 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 MAP7D1Q3KQU3 841 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 SLFNL1Q499Z3 407 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 PHTF2Q8N3S3 785 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 OCSTAMPQ9BR26 566 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 ABCC8Q09428 1581 aa10.85□□□□□ -0.67
HERPUD1-214ENST00000568651 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
HERPUD1-214ENST00000568651 FAM174AQ8TBP5 190 aa10.84□□□□□ -0.67
HERPUD1-214ENST00000568651 MYT1LQ9UL68 1186 aa10.84□□□□□ -0.67
HERPUD1-214ENST00000568651 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 COPS2P61201 443 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 ARHGAP9Q9BRR9 750 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 ZMIZ1Q9ULJ6 1067 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 SOGA1O94964 1423 aa10.83□□□□□ -0.68
HERPUD1-214ENST00000568651 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-214ENST00000568651 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
HERPUD1-214ENST00000568651 RGS22Q8NE09 1264 aa10.82□□□□□ -0.68
HERPUD1-214ENST00000568651 NOVA2Q9UNW9 492 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-214ENST00000568651 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
HERPUD1-214ENST00000568651 ADAM32Q8TC27 787 aa10.81□□□□□ -0.68
HERPUD1-214ENST00000568651 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
HERPUD1-214ENST00000568651 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
HERPUD1-214ENST00000568651 MKRN1Q9UHC7 482 aaKnown RBP10.8□□□□□ -0.68
HERPUD1-214ENST00000568651 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L15C9J2P7 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L10C9JJH3 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L13C9JLJ4 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L12C9JPN9 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L11C9JVI0 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L21D6R901 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L18D6R9N7 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L22D6RA61 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L17D6RBQ6 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L19D6RCP7 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L20D6RJB6 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 USP17L24Q0WX57 530 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 TMEM164Q5U3C3 297 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 MTRQ99707 1265 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 IL21Q9HBE4 155 aa10.79□□□□□ -0.68
HERPUD1-214ENST00000568651 NCOA4Q13772 614 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 ZBTB33Q86T24 672 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 IVNS1ABPQ9Y6Y0 642 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
HERPUD1-214ENST00000568651 CARNS1A5YM72 827 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 TLL1O43897 1013 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 PTK7Q13308 1070 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 EML3Q32P44 896 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 SND1Q7KZF4 910 aaKnown RBP eCLIP10.77□□□□□ -0.694e-8■■■■□ 19.7
HERPUD1-214ENST00000568651 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 STK32AQ8WU08 396 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
HERPUD1-214ENST00000568651 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
HERPUD1-214ENST00000568651 TRAF7Q6Q0C0 670 aa10.76□□□□□ -0.69
HERPUD1-214ENST00000568651 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-214ENST00000568651 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-214ENST00000568651 RASA1P20936 1047 aa10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 CRTC2Q53ET0 693 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 BPHLQ86WA6 291 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 DZIP3Q86Y13 1208 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 DEPDC4Q8N2C3 294 aa10.75□□□□□ -0.69
HERPUD1-214ENST00000568651 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 FAM200AQ8TCP9 573 aa10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 CLP1Q92989 425 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-214ENST00000568651 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
HERPUD1-214ENST00000568651 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
HERPUD1-214ENST00000568651 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-214ENST00000568651 NOD1Q9Y239 953 aa10.73□□□□□ -0.69
HERPUD1-214ENST00000568651 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms