RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
SHCBP1-204ENST00000565887 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
SHCBP1-204ENST00000565887 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
SHCBP1-204ENST00000565887 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SHCBP1-204ENST00000565887 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
SHCBP1-204ENST00000565887 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
SHCBP1-204ENST00000565887 BARGINQ6ZT62 677 aa17.14■□□□□ 0.33
SHCBP1-204ENST00000565887 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
SHCBP1-204ENST00000565887 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.33
SHCBP1-204ENST00000565887 COL18A1P39060 1754 aa17.13■□□□□ 0.33
SHCBP1-204ENST00000565887 HOXC9P31274 260 aa17.13■□□□□ 0.33
SHCBP1-204ENST00000565887 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
SHCBP1-204ENST00000565887 CRB1P82279 1406 aa17.13■□□□□ 0.33
SHCBP1-204ENST00000565887 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-204ENST00000565887 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
SHCBP1-204ENST00000565887 NRAPQ86VF7 1730 aa17.12■□□□□ 0.33
SHCBP1-204ENST00000565887 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
SHCBP1-204ENST00000565887 ERBB3P21860 1342 aa17.11■□□□□ 0.33
SHCBP1-204ENST00000565887 FLT4P35916 1363 aa17.11■□□□□ 0.33
SHCBP1-204ENST00000565887 FBLN1P23142 703 aa17.1■□□□□ 0.33
SHCBP1-204ENST00000565887 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
SHCBP1-204ENST00000565887 LTN1O94822 1766 aa17.1■□□□□ 0.33
SHCBP1-204ENST00000565887 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 INSRP06213 1382 aa17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 ANKRD26Q9UPS8 1709 aa17.09■□□□□ 0.33
SHCBP1-204ENST00000565887 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-204ENST00000565887 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-204ENST00000565887 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
SHCBP1-204ENST00000565887 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
SHCBP1-204ENST00000565887 A0A0G2JS52 829 aa17.07■□□□□ 0.32
SHCBP1-204ENST00000565887 MYT1Q01538 1121 aa17.07■□□□□ 0.32
SHCBP1-204ENST00000565887 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
SHCBP1-204ENST00000565887 GLI3P10071 1580 aa17.06■□□□□ 0.32
SHCBP1-204ENST00000565887 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-204ENST00000565887 DDX10Q13206 875 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-204ENST00000565887 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
SHCBP1-204ENST00000565887 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
SHCBP1-204ENST00000565887 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-204ENST00000565887 RGS12O14924 1447 aa17.04■□□□□ 0.32
SHCBP1-204ENST00000565887 SOCS7O14512 581 aa17.04■□□□□ 0.32
SHCBP1-204ENST00000565887 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
SHCBP1-204ENST00000565887 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
SHCBP1-204ENST00000565887 EXOC5O00471 708 aa17.02■□□□□ 0.32
SHCBP1-204ENST00000565887 MTHFSP49914 203 aa17.02■□□□□ 0.32
SHCBP1-204ENST00000565887 IL2RBP14784 551 aa17.01■□□□□ 0.31
SHCBP1-204ENST00000565887 DDB1Q16531 1140 aa17.01■□□□□ 0.31
SHCBP1-204ENST00000565887 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
SHCBP1-204ENST00000565887 RALBP1Q15311 655 aa17■□□□□ 0.31
SHCBP1-204ENST00000565887 CCDC125Q86Z20 511 aa17■□□□□ 0.31
SHCBP1-204ENST00000565887 NBPF6Q5VWK0 638 aa16.99■□□□□ 0.31
SHCBP1-204ENST00000565887 NBPF4Q96M43 638 aa16.99■□□□□ 0.31
SHCBP1-204ENST00000565887 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
SHCBP1-204ENST00000565887 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
SHCBP1-204ENST00000565887 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
SHCBP1-204ENST00000565887 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
SHCBP1-204ENST00000565887 EIF4A2Q14240 407 aaKnown RBP16.97■□□□□ 0.31
SHCBP1-204ENST00000565887 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
SHCBP1-204ENST00000565887 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
SHCBP1-204ENST00000565887 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
SHCBP1-204ENST00000565887 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
SHCBP1-204ENST00000565887 EYA1Q99502 592 aa16.95■□□□□ 0.3
SHCBP1-204ENST00000565887 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
SHCBP1-204ENST00000565887 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
SHCBP1-204ENST00000565887 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 IL13P35225 146 aa16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 NUDCQ9Y266 331 aa16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
SHCBP1-204ENST00000565887 PARD3Q8TEW0 1356 aa16.92■□□□□ 0.3
SHCBP1-204ENST00000565887 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
SHCBP1-204ENST00000565887 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHCBP1-204ENST00000565887 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
SHCBP1-204ENST00000565887 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
SHCBP1-204ENST00000565887 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
SHCBP1-204ENST00000565887 OVOS2A0A0G2JMS6 1433 aa16.9■□□□□ 0.3
SHCBP1-204ENST00000565887 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
SHCBP1-204ENST00000565887 BCL9O00512 1426 aa16.89■□□□□ 0.29
SHCBP1-204ENST00000565887 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
SHCBP1-204ENST00000565887 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
SHCBP1-204ENST00000565887 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
SHCBP1-204ENST00000565887 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SHCBP1-204ENST00000565887 WNK3Q9BYP7 1800 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms