RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
WHAMM-202ENST00000560964 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
WHAMM-202ENST00000560964 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
WHAMM-202ENST00000560964 SLC10A4Q96EP9 437 aa10.38□□□□□ -0.75
WHAMM-202ENST00000560964 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
WHAMM-202ENST00000560964 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
WHAMM-202ENST00000560964 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
WHAMM-202ENST00000560964 LORP23490 312 aaPredicted RBP10.36□□□□□ -0.75
WHAMM-202ENST00000560964 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
WHAMM-202ENST00000560964 PPP1R26Q5T8A7 1209 aaPredicted RBP10.36□□□□□ -0.75
WHAMM-202ENST00000560964 ZBTB33Q86T24 672 aa10.36□□□□□ -0.75
WHAMM-202ENST00000560964 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
WHAMM-202ENST00000560964 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
WHAMM-202ENST00000560964 PTK2Q05397 1052 aa10.35□□□□□ -0.75
WHAMM-202ENST00000560964 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
WHAMM-202ENST00000560964 GPSM3Q9Y4H4 160 aa10.35□□□□□ -0.75
WHAMM-202ENST00000560964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.34□□□□□ -0.751e-6■□□□□ 9.6
WHAMM-202ENST00000560964 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
WHAMM-202ENST00000560964 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
WHAMM-202ENST00000560964 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
WHAMM-202ENST00000560964 NR6A1Q15406 480 aa10.33□□□□□ -0.76
WHAMM-202ENST00000560964 Q6ZVU0 165 aa10.33□□□□□ -0.76
WHAMM-202ENST00000560964 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
WHAMM-202ENST00000560964 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
WHAMM-202ENST00000560964 FAM117AQ9C073 453 aa10.32□□□□□ -0.76
WHAMM-202ENST00000560964 AP1G2O75843 785 aa10.31□□□□□ -0.76
WHAMM-202ENST00000560964 SPINT1O43278 529 aa10.29□□□□□ -0.76
WHAMM-202ENST00000560964 CBLBQ13191 982 aa10.29□□□□□ -0.76
WHAMM-202ENST00000560964 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
WHAMM-202ENST00000560964 FBXO31Q5XUX0 539 aaPredicted RBP10.28□□□□□ -0.76
WHAMM-202ENST00000560964 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
WHAMM-202ENST00000560964 BCANQ96GW7 911 aa10.28□□□□□ -0.76
WHAMM-202ENST00000560964 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
WHAMM-202ENST00000560964 PTSQ03393 145 aa10.26□□□□□ -0.77
WHAMM-202ENST00000560964 FIGNL2A6NMB9 653 aa10.25□□□□□ -0.77
WHAMM-202ENST00000560964 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
WHAMM-202ENST00000560964 OCSTAMPQ9BR26 566 aa10.25□□□□□ -0.77
WHAMM-202ENST00000560964 USP17L8P0C7I0 530 aa10.24□□□□□ -0.77
WHAMM-202ENST00000560964 DZIP3Q86Y13 1208 aaKnown RBP10.23□□□□□ -0.77
WHAMM-202ENST00000560964 EPS8L1Q8TE68 723 aa10.22□□□□□ -0.77
WHAMM-202ENST00000560964 NANOS1Q8WY41 292 aaKnown RBP10.22□□□□□ -0.77
WHAMM-202ENST00000560964 RFC5P40937 340 aa10.21□□□□□ -0.77
WHAMM-202ENST00000560964 RELBQ01201 579 aa10.21□□□□□ -0.77
WHAMM-202ENST00000560964 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
WHAMM-202ENST00000560964 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.77
WHAMM-202ENST00000560964 GOPCQ9HD26 462 aa10.21□□□□□ -0.77
WHAMM-202ENST00000560964 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
WHAMM-202ENST00000560964 POLMQ9NP87 494 aaPredicted RBP10.2□□□□□ -0.78
WHAMM-202ENST00000560964 SLC35F4A4IF30 521 aa10.19□□□□□ -0.78
WHAMM-202ENST00000560964 TMEM259Q4ZIN3 620 aa10.19□□□□□ -0.78
WHAMM-202ENST00000560964 PCMTD1Q96MG8 357 aaPredicted RBP10.19□□□□□ -0.78
WHAMM-202ENST00000560964 INSM2Q96T92 566 aaPredicted RBP10.19□□□□□ -0.78
WHAMM-202ENST00000560964 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
WHAMM-202ENST00000560964 RAB15P59190 212 aa10.18□□□□□ -0.78
WHAMM-202ENST00000560964 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
WHAMM-202ENST00000560964 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
WHAMM-202ENST00000560964 ZNF784Q8NCA9 323 aaPredicted RBP10.18□□□□□ -0.78
WHAMM-202ENST00000560964 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
WHAMM-202ENST00000560964 ESPNB1AK53 854 aa10.17□□□□□ -0.78
WHAMM-202ENST00000560964 ADH1AP07327 375 aa10.17□□□□□ -0.78
WHAMM-202ENST00000560964 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
WHAMM-202ENST00000560964 CNTNAP3Q9BZ76 1288 aa10.17□□□□□ -0.78
WHAMM-202ENST00000560964 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
WHAMM-202ENST00000560964 ITGA6P23229 1130 aa10.16□□□□□ -0.78
WHAMM-202ENST00000560964 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
WHAMM-202ENST00000560964 ZNF395Q9H8N7 513 aaPredicted RBP10.16□□□□□ -0.78
WHAMM-202ENST00000560964 KRT76Q01546 638 aa10.15□□□□□ -0.78
WHAMM-202ENST00000560964 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
WHAMM-202ENST00000560964 RNF217Q8TC41 542 aa10.15□□□□□ -0.78
WHAMM-202ENST00000560964 LILRA1O75019 489 aa10.14□□□□□ -0.79
WHAMM-202ENST00000560964 PTGIRP43119 386 aa10.14□□□□□ -0.79
WHAMM-202ENST00000560964 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
WHAMM-202ENST00000560964 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
WHAMM-202ENST00000560964 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
WHAMM-202ENST00000560964 CDC14CA4D256 554 aa10.12□□□□□ -0.79
WHAMM-202ENST00000560964 ZBBXA8MT70 800 aa10.12□□□□□ -0.79
WHAMM-202ENST00000560964 ADD1P35611 737 aaKnown RBP10.12□□□□□ -0.79
WHAMM-202ENST00000560964 VWA5B2Q8N398 1253 aa10.12□□□□□ -0.79
WHAMM-202ENST00000560964 LYSMD3Q7Z3D4 306 aa10.1□□□□□ -0.79
WHAMM-202ENST00000560964 RNF225M0QZC1 329 aaPredicted RBP10.09□□□□□ -0.79
WHAMM-202ENST00000560964 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
WHAMM-202ENST00000560964 KDF1Q8NAX2 398 aaPredicted RBP10.09□□□□□ -0.79
WHAMM-202ENST00000560964 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
WHAMM-202ENST00000560964 PCDHB9Q9Y5E1 797 aa10.09□□□□□ -0.79
WHAMM-202ENST00000560964 SENP3-EIF4A1A0A087X0R7 540 aa10.08□□□□□ -0.8
WHAMM-202ENST00000560964 MCCD1P59942 119 aaPredicted RBP10.08□□□□□ -0.8
WHAMM-202ENST00000560964 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
WHAMM-202ENST00000560964 CYLDQ9NQC7 956 aa10.08□□□□□ -0.8
WHAMM-202ENST00000560964 ADAMTS8Q9UP79 889 aa10.08□□□□□ -0.8
WHAMM-202ENST00000560964 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
WHAMM-202ENST00000560964 RNF144AP50876 292 aaPredicted RBP10.07□□□□□ -0.8
WHAMM-202ENST00000560964 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
WHAMM-202ENST00000560964 RNF20Q5VTR2 975 aa10.07□□□□□ -0.8
WHAMM-202ENST00000560964 SVOPQ8N4V2 548 aa10.07□□□□□ -0.8
WHAMM-202ENST00000560964 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
WHAMM-202ENST00000560964 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
WHAMM-202ENST00000560964 ZNF385CQ66K41 422 aaPredicted RBP10.06□□□□□ -0.8
WHAMM-202ENST00000560964 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
WHAMM-202ENST00000560964 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
WHAMM-202ENST00000560964 GPC1P35052 558 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms