RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
WHAMM-202ENST00000560964 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
WHAMM-202ENST00000560964 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
WHAMM-202ENST00000560964 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
WHAMM-202ENST00000560964 FOXD1Q16676 465 aa23.89■■□□□ 1.41
WHAMM-202ENST00000560964 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
WHAMM-202ENST00000560964 MSH5O43196 834 aa22.43■■□□□ 1.18
WHAMM-202ENST00000560964 PIAS4Q8N2W9 510 aaPredicted RBP22.4■■□□□ 1.18
WHAMM-202ENST00000560964 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
WHAMM-202ENST00000560964 ADRA2BP18089 450 aa22.34■■□□□ 1.17
WHAMM-202ENST00000560964 POTEDQ86YR6 584 aa21.62■■□□□ 1.05
WHAMM-202ENST00000560964 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
WHAMM-202ENST00000560964 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
WHAMM-202ENST00000560964 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
WHAMM-202ENST00000560964 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
WHAMM-202ENST00000560964 CNKSR2Q8WXI2 1034 aa19.8■□□□□ 0.76
WHAMM-202ENST00000560964 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
WHAMM-202ENST00000560964 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
WHAMM-202ENST00000560964 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
WHAMM-202ENST00000560964 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
WHAMM-202ENST00000560964 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
WHAMM-202ENST00000560964 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
WHAMM-202ENST00000560964 RNF39Q9H2S5 420 aa19.09■□□□□ 0.65
WHAMM-202ENST00000560964 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
WHAMM-202ENST00000560964 C1QBPQ07021 282 aaKnown RBP18.87■□□□□ 0.61
WHAMM-202ENST00000560964 KCNA4P22459 653 aa18.81■□□□□ 0.6
WHAMM-202ENST00000560964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
WHAMM-202ENST00000560964 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
WHAMM-202ENST00000560964 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
WHAMM-202ENST00000560964 CAPN15O75808 1086 aa18.05■□□□□ 0.48
WHAMM-202ENST00000560964 SPINK5Q9NQ38 1064 aaPredicted RBP18.02■□□□□ 0.48
WHAMM-202ENST00000560964 APLP2Q06481 763 aa18■□□□□ 0.47
WHAMM-202ENST00000560964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
WHAMM-202ENST00000560964 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
WHAMM-202ENST00000560964 DSG3P32926 999 aa17.9■□□□□ 0.46
WHAMM-202ENST00000560964 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
WHAMM-202ENST00000560964 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
WHAMM-202ENST00000560964 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
WHAMM-202ENST00000560964 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
WHAMM-202ENST00000560964 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
WHAMM-202ENST00000560964 ABCB7O75027 752 aa17.59■□□□□ 0.41
WHAMM-202ENST00000560964 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
WHAMM-202ENST00000560964 POLA2Q14181 598 aa17.32■□□□□ 0.36
WHAMM-202ENST00000560964 ZBTB22O15209 634 aa17.25■□□□□ 0.35
WHAMM-202ENST00000560964 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
WHAMM-202ENST00000560964 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
WHAMM-202ENST00000560964 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
WHAMM-202ENST00000560964 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
WHAMM-202ENST00000560964 POTEHQ6S545 545 aa17■□□□□ 0.31
WHAMM-202ENST00000560964 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
WHAMM-202ENST00000560964 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
WHAMM-202ENST00000560964 FBLN2P98095 1184 aa16.68■□□□□ 0.26
WHAMM-202ENST00000560964 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
WHAMM-202ENST00000560964 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
WHAMM-202ENST00000560964 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
WHAMM-202ENST00000560964 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
WHAMM-202ENST00000560964 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
WHAMM-202ENST00000560964 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
WHAMM-202ENST00000560964 MKRN4PQ13434 485 aaPredicted RBP16.44■□□□□ 0.22
WHAMM-202ENST00000560964 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
WHAMM-202ENST00000560964 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
WHAMM-202ENST00000560964 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
WHAMM-202ENST00000560964 PIP4P2Q8N4L2 257 aa16.29■□□□□ 0.2
WHAMM-202ENST00000560964 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
WHAMM-202ENST00000560964 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
WHAMM-202ENST00000560964 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
WHAMM-202ENST00000560964 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
WHAMM-202ENST00000560964 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
WHAMM-202ENST00000560964 HAX1O00165 279 aa16■□□□□ 0.15
WHAMM-202ENST00000560964 SP7Q8TDD2 431 aaPredicted RBP15.99■□□□□ 0.15
WHAMM-202ENST00000560964 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
WHAMM-202ENST00000560964 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
WHAMM-202ENST00000560964 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
WHAMM-202ENST00000560964 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
WHAMM-202ENST00000560964 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
WHAMM-202ENST00000560964 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
WHAMM-202ENST00000560964 EVX2Q03828 476 aa15.7■□□□□ 0.1
WHAMM-202ENST00000560964 FARP1Q9Y4F1 1045 aaPredicted RBP15.59■□□□□ 0.09
WHAMM-202ENST00000560964 CREBZFQ9NS37 354 aa15.48■□□□□ 0.07
WHAMM-202ENST00000560964 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
WHAMM-202ENST00000560964 GABBR2O75899 941 aa15.44■□□□□ 0.06
WHAMM-202ENST00000560964 PROM2Q8N271 834 aa15.4■□□□□ 0.06
WHAMM-202ENST00000560964 CLCN6P51797 869 aa15.37■□□□□ 0.05
WHAMM-202ENST00000560964 NPM1P06748 294 aaKnown RBP eCLIP15.3■□□□□ 0.04
WHAMM-202ENST00000560964 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
WHAMM-202ENST00000560964 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
WHAMM-202ENST00000560964 ZNF579Q8NAF0 562 aaKnown RBP15.25■□□□□ 0.03
WHAMM-202ENST00000560964 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
WHAMM-202ENST00000560964 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
WHAMM-202ENST00000560964 DCBLD2Q96PD2 775 aa15.09■□□□□ 0.01
WHAMM-202ENST00000560964 FKBP8Q14318 412 aa15.07■□□□□ 0
WHAMM-202ENST00000560964 MIER1Q8N108 512 aa15.07■□□□□ 0
WHAMM-202ENST00000560964 POTEIP0CG38 1075 aa15.05■□□□□ -0
WHAMM-202ENST00000560964 PHF12Q96QT6 1004 aa15.02■□□□□ -0
WHAMM-202ENST00000560964 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
WHAMM-202ENST00000560964 LHX8Q68G74 356 aa15□□□□□ -0.01
WHAMM-202ENST00000560964 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
WHAMM-202ENST00000560964 TSPYL2Q9H2G4 693 aaPredicted RBP14.94□□□□□ -0.02
WHAMM-202ENST00000560964 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
WHAMM-202ENST00000560964 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms