RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
MARK3-216ENST00000558953 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
MARK3-216ENST00000558953 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
MARK3-216ENST00000558953 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
MARK3-216ENST00000558953 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
MARK3-216ENST00000558953 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
MARK3-216ENST00000558953 NWD1Q149M9 1564 aa9.3□□□□□ -0.92
MARK3-216ENST00000558953 NKTRP30414 1462 aaKnown RBP9.3□□□□□ -0.92
MARK3-216ENST00000558953 TMEM94Q12767 1356 aa9.3□□□□□ -0.92
MARK3-216ENST00000558953 SOCS7O14512 581 aa9.3□□□□□ -0.92
MARK3-216ENST00000558953 SLC24A1O60721 1099 aa9.3□□□□□ -0.92
MARK3-216ENST00000558953 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
MARK3-216ENST00000558953 RRBP1Q9P2E9 1410 aaKnown RBP9.3□□□□□ -0.92
MARK3-216ENST00000558953 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
MARK3-216ENST00000558953 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
MARK3-216ENST00000558953 PHF14O94880 888 aa9.29□□□□□ -0.92
MARK3-216ENST00000558953 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
MARK3-216ENST00000558953 SPHKAPQ2M3C7 1700 aa9.28□□□□□ -0.92
MARK3-216ENST00000558953 PPP4CP60510 307 aa9.28□□□□□ -0.92
MARK3-216ENST00000558953 FAM135BQ49AJ0 1406 aa9.27□□□□□ -0.93
MARK3-216ENST00000558953 DIP2AQ14689 1571 aa9.27□□□□□ -0.93
MARK3-216ENST00000558953 MSH6P52701 1360 aa9.26□□□□□ -0.93
MARK3-216ENST00000558953 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
MARK3-216ENST00000558953 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
MARK3-216ENST00000558953 PIK3R4Q99570 1358 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 NAIPQ13075 1403 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 ADAMTS13Q76LX8 1427 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
MARK3-216ENST00000558953 RBM33Q96EV2 1170 aaKnown RBP9.25□□□□□ -0.93
MARK3-216ENST00000558953 MTRQ99707 1265 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
MARK3-216ENST00000558953 ROBO1Q9Y6N7 1651 aa9.25□□□□□ -0.93
MARK3-216ENST00000558953 NCOA3Q9Y6Q9 1424 aa9.24□□□□□ -0.93
MARK3-216ENST00000558953 DDX27Q96GQ7 796 aaKnown RBP9.24□□□□□ -0.93
MARK3-216ENST00000558953 TRPM2O94759 1503 aa9.24□□□□□ -0.93
MARK3-216ENST00000558953 KIF1BO60333 1816 aa9.24□□□□□ -0.93
MARK3-216ENST00000558953 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
MARK3-216ENST00000558953 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
MARK3-216ENST00000558953 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
MARK3-216ENST00000558953 HFM1A2PYH4 1435 aa9.22□□□□□ -0.93
MARK3-216ENST00000558953 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
MARK3-216ENST00000558953 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
MARK3-216ENST00000558953 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
MARK3-216ENST00000558953 CLTCL1P53675 1640 aa9.22□□□□□ -0.93
MARK3-216ENST00000558953 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.93
MARK3-216ENST00000558953 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.93
MARK3-216ENST00000558953 EPAS1Q99814 870 aa9.21□□□□□ -0.94
MARK3-216ENST00000558953 C19orf44Q9H6X5 657 aa9.21□□□□□ -0.94
MARK3-216ENST00000558953 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
MARK3-216ENST00000558953 PHLPP1O60346 1717 aa9.2□□□□□ -0.94
MARK3-216ENST00000558953 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
MARK3-216ENST00000558953 CADPS2Q86UW7 1296 aa9.2□□□□□ -0.94
MARK3-216ENST00000558953 NEXMIFQ5QGS0 1516 aa9.2□□□□□ -0.94
MARK3-216ENST00000558953 ATF3P18847 181 aa9.19□□□□□ -0.94
MARK3-216ENST00000558953 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
MARK3-216ENST00000558953 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
MARK3-216ENST00000558953 ZNF516Q92618 1163 aa9.19□□□□□ -0.94
MARK3-216ENST00000558953 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
MARK3-216ENST00000558953 XRN1Q8IZH2 1706 aaKnown RBP9.19□□□□□ -0.94
MARK3-216ENST00000558953 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
MARK3-216ENST00000558953 POTECB2RU33 542 aa9.17□□□□□ -0.94
MARK3-216ENST00000558953 MFSD10Q14728 455 aa9.17□□□□□ -0.94
MARK3-216ENST00000558953 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
MARK3-216ENST00000558953 DCCP43146 1447 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 METP08581 1390 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 JCADQ9P266 1359 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 RPGRIP1LQ68CZ1 1315 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 GGCXP38435 758 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 MYT1Q01538 1121 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
MARK3-216ENST00000558953 PPLO60437 1756 aa9.15□□□□□ -0.94
MARK3-216ENST00000558953 PKDCCQ504Y2 493 aa9.15□□□□□ -0.94
MARK3-216ENST00000558953 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.94
MARK3-216ENST00000558953 AHDC1Q5TGY3 1603 aaPredicted RBP9.15□□□□□ -0.94
MARK3-216ENST00000558953 ACIN1Q9UKV3 1341 aaKnown RBP9.14□□□□□ -0.95
MARK3-216ENST00000558953 DGAT1O75907 488 aa9.14□□□□□ -0.95
MARK3-216ENST00000558953 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
MARK3-216ENST00000558953 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
MARK3-216ENST00000558953 SETD1AO15047 1707 aaKnown RBP9.14□□□□□ -0.95
MARK3-216ENST00000558953 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
MARK3-216ENST00000558953 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
MARK3-216ENST00000558953 TRIM67Q6ZTA4 783 aa9.13□□□□□ -0.95
MARK3-216ENST00000558953 BRINP3Q76B58 766 aa9.13□□□□□ -0.95
MARK3-216ENST00000558953 SHPRHQ149N8 1683 aa9.13□□□□□ -0.95
MARK3-216ENST00000558953 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
MARK3-216ENST00000558953 SPATA31A6Q5VVP1 1343 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 NALCNQ8IZF0 1738 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
MARK3-216ENST00000558953 MPHOSPH9Q99550 1183 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 MST1RQ04912 1400 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 PTCH1Q13635 1447 aa9.12□□□□□ -0.95
MARK3-216ENST00000558953 ASXL1Q8IXJ9 1541 aa9.11□□□□□ -0.95
MARK3-216ENST00000558953 NHSL1Q5SYE7 1610 aa9.11□□□□□ -0.95
MARK3-216ENST00000558953 PRAG1Q86YV5 1406 aa9.11□□□□□ -0.95
MARK3-216ENST00000558953 POTEAQ6S8J7 498 aa9.1□□□□□ -0.95
MARK3-216ENST00000558953 IFT172Q9UG01 1749 aa9.1□□□□□ -0.95
MARK3-216ENST00000558953 ROBO2Q9HCK4 1378 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms