RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 WDR97A6NE52 1622 aa9.41□□□□□ -0.9
TMEM260-212ENST00000556810 TNIKQ9UKE5 1360 aa9.4□□□□□ -0.9
TMEM260-212ENST00000556810 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-212ENST00000556810 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
TMEM260-212ENST00000556810 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-212ENST00000556810 SYNJ2O15056 1496 aa9.4□□□□□ -0.91
TMEM260-212ENST00000556810 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
TMEM260-212ENST00000556810 PLEKHG3A1L390 1219 aa9.38□□□□□ -0.91
TMEM260-212ENST00000556810 MPNDQ8N594 471 aa9.38□□□□□ -0.91
TMEM260-212ENST00000556810 ERICH3Q5RHP9 1530 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 FOXJ1Q92949 421 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 SENP2Q9HC62 589 aa9.37□□□□□ -0.91
TMEM260-212ENST00000556810 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
TMEM260-212ENST00000556810 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
TMEM260-212ENST00000556810 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
TMEM260-212ENST00000556810 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
TMEM260-212ENST00000556810 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
TMEM260-212ENST00000556810 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
TMEM260-212ENST00000556810 AGERQ15109 404 aa9.35□□□□□ -0.91
TMEM260-212ENST00000556810 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
TMEM260-212ENST00000556810 ARMC2Q8NEN0 867 aa9.35□□□□□ -0.91
TMEM260-212ENST00000556810 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
TMEM260-212ENST00000556810 NNTQ13423 1086 aa9.34□□□□□ -0.91
TMEM260-212ENST00000556810 BPHLQ86WA6 291 aaPredicted RBP9.34□□□□□ -0.91
TMEM260-212ENST00000556810 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
TMEM260-212ENST00000556810 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
TMEM260-212ENST00000556810 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 ADH1CP00326 375 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 ERCC6L2Q5T890 1561 aa9.32□□□□□ -0.92
TMEM260-212ENST00000556810 BMP1P13497 986 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 CTDSPL2Q05D32 466 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 ARID5BQ14865 1188 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
TMEM260-212ENST00000556810 ATP1B4Q9UN42 357 aaPredicted RBP9.31□□□□□ -0.92
TMEM260-212ENST00000556810 PRXQ9BXM0 1461 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
TMEM260-212ENST00000556810 CUL7Q14999 1698 aa9.3□□□□□ -0.92
TMEM260-212ENST00000556810 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
TMEM260-212ENST00000556810 CEP162Q5TB80 1403 aa9.3□□□□□ -0.92
TMEM260-212ENST00000556810 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-212ENST00000556810 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
TMEM260-212ENST00000556810 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 TIMP2P16035 220 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 WDR4P57081 412 aaKnown RBP9.28□□□□□ -0.92
TMEM260-212ENST00000556810 LCE2AQ5TA79 106 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-212ENST00000556810 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
TMEM260-212ENST00000556810 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 RAPGEF2Q9Y4G8 1499 aa9.28□□□□□ -0.92
TMEM260-212ENST00000556810 IGF1RP08069 1367 aa9.27□□□□□ -0.93
TMEM260-212ENST00000556810 WFS1O76024 890 aa9.27□□□□□ -0.93
TMEM260-212ENST00000556810 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-212ENST00000556810 NR5A1Q13285 461 aa9.27□□□□□ -0.93
TMEM260-212ENST00000556810 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
TMEM260-212ENST00000556810 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
TMEM260-212ENST00000556810 MAGEB6P1A0A0J9YX57 407 aa9.26□□□□□ -0.93
TMEM260-212ENST00000556810 KLF16Q9BXK1 252 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-212ENST00000556810 NUP160Q12769 1436 aa9.25□□□□□ -0.93
TMEM260-212ENST00000556810 GRM5P41594 1212 aa9.25□□□□□ -0.93
TMEM260-212ENST00000556810 NFX1Q12986 1120 aaKnown RBP9.25□□□□□ -0.93
TMEM260-212ENST00000556810 KIF13AQ9H1H9 1805 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 CLIP1P30622 1438 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 NR3C2P08235 984 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 TRMT44Q8IYL2 757 aaKnown RBP9.24□□□□□ -0.93
TMEM260-212ENST00000556810 ZFP42Q96MM3 310 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
TMEM260-212ENST00000556810 SHROOM2Q13796 1616 aa9.23□□□□□ -0.93
TMEM260-212ENST00000556810 TERTO14746 1132 aaKnown RBP9.23□□□□□ -0.93
TMEM260-212ENST00000556810 AP1G2O75843 785 aa9.23□□□□□ -0.93
TMEM260-212ENST00000556810 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
TMEM260-212ENST00000556810 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
TMEM260-212ENST00000556810 FKBPLQ9UIM3 349 aa9.23□□□□□ -0.93
TMEM260-212ENST00000556810 FHAD1B1AJZ9 1412 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 FSHRP23945 695 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 SCARF1Q14162 830 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 NR6A1Q15406 480 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 PDXDC2PQ6P474 469 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 VASH1Q7L8A9 365 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-212ENST00000556810 ITPKCQ96DU7 683 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
TMEM260-212ENST00000556810 PRG4Q92954 1404 aaPredicted RBP9.22□□□□□ -0.93
TMEM260-212ENST00000556810 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
TMEM260-212ENST00000556810 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
TMEM260-212ENST00000556810 ARHGAP9Q9BRR9 750 aa9.21□□□□□ -0.94
TMEM260-212ENST00000556810 ZC3H4Q9UPT8 1303 aaKnown RBP9.21□□□□□ -0.94
TMEM260-212ENST00000556810 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
TMEM260-212ENST00000556810 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
TMEM260-212ENST00000556810 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
TMEM260-212ENST00000556810 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms