RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CAMTA1Q9Y6Y1 1673 aa16.14■□□□□ 0.17
SLIRP-205ENST00000556310 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
SLIRP-205ENST00000556310 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
SLIRP-205ENST00000556310 COL18A1P39060 1754 aa16.13■□□□□ 0.17
SLIRP-205ENST00000556310 ABCC6O95255 1503 aa16.13■□□□□ 0.17
SLIRP-205ENST00000556310 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
SLIRP-205ENST00000556310 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 LTN1O94822 1766 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIRP-205ENST00000556310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIRP-205ENST00000556310 KCNH5Q8NCM2 988 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 EP400Q96L91 3159 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
SLIRP-205ENST00000556310 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-205ENST00000556310 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
SLIRP-205ENST00000556310 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
SLIRP-205ENST00000556310 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
SLIRP-205ENST00000556310 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
SLIRP-205ENST00000556310 NME9Q86XW9 330 aa16.09■□□□□ 0.17
SLIRP-205ENST00000556310 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-205ENST00000556310 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
SLIRP-205ENST00000556310 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-205ENST00000556310 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLIRP-205ENST00000556310 STRN4Q9NRL3 753 aa16.07■□□□□ 0.16
SLIRP-205ENST00000556310 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
SLIRP-205ENST00000556310 SPATA31A1Q5TZJ5 1347 aa16.07■□□□□ 0.16
SLIRP-205ENST00000556310 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
SLIRP-205ENST00000556310 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
SLIRP-205ENST00000556310 SEPT12Q8IYM1 358 aa16.06■□□□□ 0.16
SLIRP-205ENST00000556310 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-205ENST00000556310 ZBTB7CA1YPR0 619 aa16.05■□□□□ 0.16
SLIRP-205ENST00000556310 SOX12O15370 315 aa16.05■□□□□ 0.16
SLIRP-205ENST00000556310 EVA1CP58658 441 aa16.05■□□□□ 0.16
SLIRP-205ENST00000556310 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
SLIRP-205ENST00000556310 CRB1P82279 1406 aa16.04■□□□□ 0.16
SLIRP-205ENST00000556310 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
SLIRP-205ENST00000556310 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
SLIRP-205ENST00000556310 A0A0G2JS52 829 aa16.02■□□□□ 0.16
SLIRP-205ENST00000556310 MYT1Q01538 1121 aa16.02■□□□□ 0.16
SLIRP-205ENST00000556310 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.15
SLIRP-205ENST00000556310 COG3Q96JB2 828 aa16.01■□□□□ 0.15
SLIRP-205ENST00000556310 FAM208AQ9UK61 1670 aaKnown RBP16.01■□□□□ 0.15
SLIRP-205ENST00000556310 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 ANKRD26Q9UPS8 1709 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 BARGINQ6ZT62 677 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
SLIRP-205ENST00000556310 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
SLIRP-205ENST00000556310 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
SLIRP-205ENST00000556310 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
SLIRP-205ENST00000556310 FYB1O15117 783 aa15.98■□□□□ 0.15
SLIRP-205ENST00000556310 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-205ENST00000556310 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
SLIRP-205ENST00000556310 RGPD1P0DJD0 1748 aa15.97■□□□□ 0.15
SLIRP-205ENST00000556310 CARD14Q9BXL6 1004 aa15.97■□□□□ 0.15
SLIRP-205ENST00000556310 ERBB3P21860 1342 aa15.96■□□□□ 0.15
SLIRP-205ENST00000556310 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
SLIRP-205ENST00000556310 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.15
SLIRP-205ENST00000556310 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
SLIRP-205ENST00000556310 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
SLIRP-205ENST00000556310 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
SLIRP-205ENST00000556310 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
SLIRP-205ENST00000556310 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
SLIRP-205ENST00000556310 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
SLIRP-205ENST00000556310 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
SLIRP-205ENST00000556310 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
SLIRP-205ENST00000556310 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SLIRP-205ENST00000556310 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
SLIRP-205ENST00000556310 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
SLIRP-205ENST00000556310 IP6K1Q92551 441 aa15.92■□□□□ 0.14
SLIRP-205ENST00000556310 KIF7Q2M1P5 1343 aa15.92■□□□□ 0.14
SLIRP-205ENST00000556310 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
SLIRP-205ENST00000556310 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
SLIRP-205ENST00000556310 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
SLIRP-205ENST00000556310 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
SLIRP-205ENST00000556310 HOXC9P31274 260 aa15.9■□□□□ 0.14
SLIRP-205ENST00000556310 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
SLIRP-205ENST00000556310 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
SLIRP-205ENST00000556310 NSD2O96028 1365 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 FBLN1P23142 703 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 AMPHP49418 695 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 RRS1Q15050 365 aaKnown RBP15.89■□□□□ 0.13
SLIRP-205ENST00000556310 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 PANK3Q9H999 370 aa15.89■□□□□ 0.13
SLIRP-205ENST00000556310 FLT4P35916 1363 aa15.88■□□□□ 0.13
SLIRP-205ENST00000556310 OVOS2A0A0G2JMS6 1433 aa15.88■□□□□ 0.13
SLIRP-205ENST00000556310 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
SLIRP-205ENST00000556310 NLRP2Q9NX02 1062 aa15.88■□□□□ 0.13
SLIRP-205ENST00000556310 SBF2Q86WG5 1849 aa15.88■□□□□ 0.13
SLIRP-205ENST00000556310 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
SLIRP-205ENST00000556310 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
SLIRP-205ENST00000556310 DDB1Q16531 1140 aa15.87■□□□□ 0.13
SLIRP-205ENST00000556310 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
SLIRP-205ENST00000556310 INSRP06213 1382 aa15.86■□□□□ 0.13
SLIRP-205ENST00000556310 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
SLIRP-205ENST00000556310 BCL9O00512 1426 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms