RNA–Protein interactions for RNA: ENST00000556273.5

ITGA7-215, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-215ENST00000556273 FBLN1P23142 703 aa17.35■□□□□ 0.37
ITGA7-215ENST00000556273 RXRBP28702 533 aa17.35■□□□□ 0.37
ITGA7-215ENST00000556273 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
ITGA7-215ENST00000556273 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
ITGA7-215ENST00000556273 FLT4P35916 1363 aa17.35■□□□□ 0.37
ITGA7-215ENST00000556273 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
ITGA7-215ENST00000556273 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
ITGA7-215ENST00000556273 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
ITGA7-215ENST00000556273 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
ITGA7-215ENST00000556273 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
ITGA7-215ENST00000556273 INSRP06213 1382 aa17.33■□□□□ 0.36
ITGA7-215ENST00000556273 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
ITGA7-215ENST00000556273 ANKRD24Q8TF21 1146 aa17.33■□□□□ 0.36
ITGA7-215ENST00000556273 CCDC9Q9Y3X0 531 aaKnown RBP17.33■□□□□ 0.36
ITGA7-215ENST00000556273 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
ITGA7-215ENST00000556273 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
ITGA7-215ENST00000556273 TOM1L2Q6ZVM7 507 aa17.32■□□□□ 0.36
ITGA7-215ENST00000556273 CARD10Q9BWT7 1032 aa17.32■□□□□ 0.36
ITGA7-215ENST00000556273 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
ITGA7-215ENST00000556273 ATRNO75882 1429 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 ERBB3P21860 1342 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 ONECUT3O60422 494 aaPredicted RBP17.31■□□□□ 0.36
ITGA7-215ENST00000556273 MTHFSP49914 203 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
ITGA7-215ENST00000556273 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
ITGA7-215ENST00000556273 CAMTA1Q9Y6Y1 1673 aa17.31■□□□□ 0.36
ITGA7-215ENST00000556273 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
ITGA7-215ENST00000556273 SPATA31A1Q5TZJ5 1347 aa17.3■□□□□ 0.36
ITGA7-215ENST00000556273 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
ITGA7-215ENST00000556273 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
ITGA7-215ENST00000556273 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
ITGA7-215ENST00000556273 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
ITGA7-215ENST00000556273 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
ITGA7-215ENST00000556273 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
ITGA7-215ENST00000556273 CRB1P82279 1406 aa17.29■□□□□ 0.36
ITGA7-215ENST00000556273 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
ITGA7-215ENST00000556273 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
ITGA7-215ENST00000556273 PPP2R1AP30153 589 aa17.28■□□□□ 0.36
ITGA7-215ENST00000556273 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
ITGA7-215ENST00000556273 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.36
ITGA7-215ENST00000556273 ANP32CO43423 234 aa17.26■□□□□ 0.35
ITGA7-215ENST00000556273 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
ITGA7-215ENST00000556273 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
ITGA7-215ENST00000556273 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
ITGA7-215ENST00000556273 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
ITGA7-215ENST00000556273 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
ITGA7-215ENST00000556273 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
ITGA7-215ENST00000556273 MYBBP1AQ9BQG0 1328 aaKnown RBP17.23■□□□□ 0.35
ITGA7-215ENST00000556273 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
ITGA7-215ENST00000556273 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
ITGA7-215ENST00000556273 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
ITGA7-215ENST00000556273 COL18A1P39060 1754 aa17.23■□□□□ 0.35
ITGA7-215ENST00000556273 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.22■□□□□ 0.35
ITGA7-215ENST00000556273 IL13P35225 146 aa17.22■□□□□ 0.35
ITGA7-215ENST00000556273 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
ITGA7-215ENST00000556273 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
ITGA7-215ENST00000556273 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
ITGA7-215ENST00000556273 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
ITGA7-215ENST00000556273 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
ITGA7-215ENST00000556273 IL2RBP14784 551 aa17.2■□□□□ 0.34
ITGA7-215ENST00000556273 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
ITGA7-215ENST00000556273 EYA1Q99502 592 aa17.2■□□□□ 0.34
ITGA7-215ENST00000556273 EXOC5O00471 708 aa17.19■□□□□ 0.34
ITGA7-215ENST00000556273 A0A0G2JS52 829 aa17.18■□□□□ 0.34
ITGA7-215ENST00000556273 MYT1Q01538 1121 aa17.18■□□□□ 0.34
ITGA7-215ENST00000556273 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
ITGA7-215ENST00000556273 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
ITGA7-215ENST00000556273 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
ITGA7-215ENST00000556273 DDB1Q16531 1140 aa17.17■□□□□ 0.34
ITGA7-215ENST00000556273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
ITGA7-215ENST00000556273 LTN1O94822 1766 aa17.17■□□□□ 0.34
ITGA7-215ENST00000556273 IGSF1Q8N6C5 1336 aa17.17■□□□□ 0.34
ITGA7-215ENST00000556273 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
ITGA7-215ENST00000556273 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
ITGA7-215ENST00000556273 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
ITGA7-215ENST00000556273 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
ITGA7-215ENST00000556273 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
ITGA7-215ENST00000556273 FCHSD2O94868 740 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 ZCRB1Q8TBF4 217 aaKnown RBP17.13■□□□□ 0.33
ITGA7-215ENST00000556273 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
ITGA7-215ENST00000556273 GLI3P10071 1580 aa17.12■□□□□ 0.33
ITGA7-215ENST00000556273 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
ITGA7-215ENST00000556273 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
ITGA7-215ENST00000556273 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
ITGA7-215ENST00000556273 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
ITGA7-215ENST00000556273 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
ITGA7-215ENST00000556273 KDRP35968 1356 aa17.11■□□□□ 0.33
ITGA7-215ENST00000556273 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
ITGA7-215ENST00000556273 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
ITGA7-215ENST00000556273 RGS12O14924 1447 aa17.1■□□□□ 0.33
ITGA7-215ENST00000556273 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
ITGA7-215ENST00000556273 NEFMP07197 916 aa17.09■□□□□ 0.33
ITGA7-215ENST00000556273 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms