RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 ATRNO75882 1429 aa8.95□□□□□ -0.98
PRKCH-217ENST00000555604 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 KIF20BQ96Q89 1820 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 SOX12O15370 315 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 HOXC9P31274 260 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 RALBP1Q15311 655 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 BARGINQ6ZT62 677 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 POLKQ9UBT6 870 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 WDR17Q8IZU2 1322 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 INSRP06213 1382 aa8.94□□□□□ -0.98
PRKCH-217ENST00000555604 SMG6Q86US8 1419 aaKnown RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 COL5A2P05997 1499 aaPredicted RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 CDK12Q9NYV4 1490 aaPredicted RBP8.94□□□□□ -0.98
PRKCH-217ENST00000555604 CC2D1BQ5T0F9 858 aaKnown RBP8.93□□□□□ -0.98
PRKCH-217ENST00000555604 CARD10Q9BWT7 1032 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 ERBB3P21860 1342 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 CRB1P82279 1406 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 LMO7Q8WWI1 1683 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 CAMTA1Q9Y6Y1 1673 aa8.93□□□□□ -0.98
PRKCH-217ENST00000555604 ANKRD26Q9UPS8 1709 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 SPATA31A1Q5TZJ5 1347 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
PRKCH-217ENST00000555604 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 ANKRD24Q8TF21 1146 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 STRN4Q9NRL3 753 aa8.92□□□□□ -0.98
PRKCH-217ENST00000555604 CCDC9Q9Y3X0 531 aaKnown RBP8.92□□□□□ -0.98
PRKCH-217ENST00000555604 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
PRKCH-217ENST00000555604 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
PRKCH-217ENST00000555604 TOM1L2Q6ZVM7 507 aa8.91□□□□□ -0.98
PRKCH-217ENST00000555604 CFAP53Q96M91 514 aa8.91□□□□□ -0.98
PRKCH-217ENST00000555604 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
PRKCH-217ENST00000555604 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.98
PRKCH-217ENST00000555604 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-217ENST00000555604 TNNT2P45379 298 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-217ENST00000555604 MTHFSP49914 203 aa8.9□□□□□ -0.98
PRKCH-217ENST00000555604 HSP90AB2PQ58FF8 381 aa8.9□□□□□ -0.98
PRKCH-217ENST00000555604 EMILIN1Q9Y6C2 1016 aa8.9□□□□□ -0.98
PRKCH-217ENST00000555604 COL18A1P39060 1754 aa8.9□□□□□ -0.98
PRKCH-217ENST00000555604 NRAPQ86VF7 1730 aa8.89□□□□□ -0.99
PRKCH-217ENST00000555604 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
PRKCH-217ENST00000555604 FBLN1P23142 703 aa8.88□□□□□ -0.99
PRKCH-217ENST00000555604 PPP2R1AP30153 589 aa8.88□□□□□ -0.99
PRKCH-217ENST00000555604 NUDCQ9Y266 331 aa8.88□□□□□ -0.99
PRKCH-217ENST00000555604 LTN1O94822 1766 aa8.88□□□□□ -0.99
PRKCH-217ENST00000555604 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
PRKCH-217ENST00000555604 MYBBP1AQ9BQG0 1328 aaKnown RBP8.87□□□□□ -0.99
PRKCH-217ENST00000555604 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
PRKCH-217ENST00000555604 IL2RBP14784 551 aa8.87□□□□□ -0.99
PRKCH-217ENST00000555604 PRKRIP1Q9H875 184 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-217ENST00000555604 EXOC5O00471 708 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 ANP32CO43423 234 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 IL13P35225 146 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 EIF4A2Q14240 407 aaKnown RBP8.86□□□□□ -0.99
PRKCH-217ENST00000555604 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
PRKCH-217ENST00000555604 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 RAPGEF4Q8WZA2 1011 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 LTV1Q96GA3 475 aaPredicted RBP8.86□□□□□ -0.99
PRKCH-217ENST00000555604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.99
PRKCH-217ENST00000555604 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 NCAPD2Q15021 1401 aa8.86□□□□□ -0.99
PRKCH-217ENST00000555604 IGSF1Q8N6C5 1336 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 DDB1Q16531 1140 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 NBPF6Q5VWK0 638 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 NBPF4Q96M43 638 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 PNNQ9H307 717 aaKnown RBP8.85□□□□□ -0.99
PRKCH-217ENST00000555604 GLI3P10071 1580 aa8.85□□□□□ -0.99
PRKCH-217ENST00000555604 A0A0G2JS52 829 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 DISP2A7MBM2 1401 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 RGS12O14924 1447 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
PRKCH-217ENST00000555604 MYT1Q01538 1121 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 AMOTQ4VCS5 1084 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 KRT27Q7Z3Y8 459 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 CCDC125Q86Z20 511 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 EYA1Q99502 592 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
PRKCH-217ENST00000555604 MAP2P11137 1827 aaKnown RBP8.84□□□□□ -0.99
PRKCH-217ENST00000555604 BCL9O00512 1426 aa8.83□□□□□ -1
PRKCH-217ENST00000555604 CNGB1Q14028 1251 aaPredicted RBP8.83□□□□□ -1
PRKCH-217ENST00000555604 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
PRKCH-217ENST00000555604 SPG7Q9UQ90 795 aa8.83□□□□□ -1
PRKCH-217ENST00000555604 KDRP35968 1356 aa8.83□□□□□ -1
PRKCH-217ENST00000555604 THSD7AQ9UPZ6 1657 aa8.82□□□□□ -1
PRKCH-217ENST00000555604 OVOS2A0A0G2JMS6 1433 aa8.82□□□□□ -1
PRKCH-217ENST00000555604 FCHSD2O94868 740 aa8.82□□□□□ -1
PRKCH-217ENST00000555604 ZCRB1Q8TBF4 217 aaKnown RBP8.82□□□□□ -1
PRKCH-217ENST00000555604 TNS2Q63HR2 1409 aa8.81□□□□□ -1
PRKCH-217ENST00000555604 NEFMP07197 916 aa8.81□□□□□ -1
PRKCH-217ENST00000555604 PLEKHO1Q53GL0 409 aaPredicted RBP8.81□□□□□ -1
PRKCH-217ENST00000555604 SULT6B1Q6IMI4 303 aa8.81□□□□□ -1
PRKCH-217ENST00000555604 COL3A1P02461 1466 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms