RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
CHD8-208ENST00000555301 USP21Q9UK80 565 aa19.31■□□□□ 0.68
CHD8-208ENST00000555301 AXIN2Q9Y2T1 843 aa19.31■□□□□ 0.68
CHD8-208ENST00000555301 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
CHD8-208ENST00000555301 ANP32CO43423 234 aa19.3■□□□□ 0.68
CHD8-208ENST00000555301 PPP2R1AP30153 589 aa19.3■□□□□ 0.68
CHD8-208ENST00000555301 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
CHD8-208ENST00000555301 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
CHD8-208ENST00000555301 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
CHD8-208ENST00000555301 MTHFSP49914 203 aa19.29■□□□□ 0.68
CHD8-208ENST00000555301 EVA1CP58658 441 aa19.29■□□□□ 0.68
CHD8-208ENST00000555301 INSRP06213 1382 aa19.29■□□□□ 0.68
CHD8-208ENST00000555301 CAMTA1Q9Y6Y1 1673 aa19.28■□□□□ 0.68
CHD8-208ENST00000555301 BCL9LQ86UU0 1499 aa19.28■□□□□ 0.68
CHD8-208ENST00000555301 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
CHD8-208ENST00000555301 LMO7Q8WWI1 1683 aa19.27■□□□□ 0.68
CHD8-208ENST00000555301 HSP90AB2PQ58FF8 381 aa19.27■□□□□ 0.68
CHD8-208ENST00000555301 STRN4Q9NRL3 753 aa19.27■□□□□ 0.68
CHD8-208ENST00000555301 COL5A2P05997 1499 aaPredicted RBP19.27■□□□□ 0.67
CHD8-208ENST00000555301 ERBB3P21860 1342 aa19.26■□□□□ 0.67
CHD8-208ENST00000555301 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
CHD8-208ENST00000555301 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
CHD8-208ENST00000555301 TRPC5Q9UL62 973 aaPredicted RBP19.26■□□□□ 0.67
CHD8-208ENST00000555301 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
CHD8-208ENST00000555301 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
CHD8-208ENST00000555301 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
CHD8-208ENST00000555301 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
CHD8-208ENST00000555301 LTN1O94822 1766 aa19.24■□□□□ 0.67
CHD8-208ENST00000555301 COL18A1P39060 1754 aa19.24■□□□□ 0.67
CHD8-208ENST00000555301 VPS72Q15906 364 aa19.24■□□□□ 0.67
CHD8-208ENST00000555301 NWD2Q9ULI1 1742 aa19.24■□□□□ 0.67
CHD8-208ENST00000555301 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
CHD8-208ENST00000555301 LTV1Q96GA3 475 aaPredicted RBP19.23■□□□□ 0.67
CHD8-208ENST00000555301 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
CHD8-208ENST00000555301 LARP1Q6PKG0 1096 aaKnown RBP19.22■□□□□ 0.67
CHD8-208ENST00000555301 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
CHD8-208ENST00000555301 QTRT2Q9H974 415 aaKnown RBP19.22■□□□□ 0.67
CHD8-208ENST00000555301 ATRNO75882 1429 aa19.21■□□□□ 0.67
CHD8-208ENST00000555301 CRB1P82279 1406 aa19.21■□□□□ 0.67
CHD8-208ENST00000555301 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
CHD8-208ENST00000555301 CCDC9Q9Y3X0 531 aaKnown RBP19.21■□□□□ 0.67
CHD8-208ENST00000555301 EIF4A2Q14240 407 aaKnown RBP19.2■□□□□ 0.66
CHD8-208ENST00000555301 MAP2P11137 1827 aaKnown RBP19.19■□□□□ 0.66
CHD8-208ENST00000555301 DIAPH1O60610 1272 aaKnown RBP19.19■□□□□ 0.66
CHD8-208ENST00000555301 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
CHD8-208ENST00000555301 CARD10Q9BWT7 1032 aa19.19■□□□□ 0.66
CHD8-208ENST00000555301 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
CHD8-208ENST00000555301 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
CHD8-208ENST00000555301 SPATA31A5Q5VU36 1347 aa19.19■□□□□ 0.66
CHD8-208ENST00000555301 SPATA31A7Q8IWB4 1347 aa19.19■□□□□ 0.66
CHD8-208ENST00000555301 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.18■□□□□ 0.66
CHD8-208ENST00000555301 THRAP3Q9Y2W1 955 aaKnown RBP19.18■□□□□ 0.66
CHD8-208ENST00000555301 SPATA31A1Q5TZJ5 1347 aa19.18■□□□□ 0.66
CHD8-208ENST00000555301 IL13P35225 146 aa19.17■□□□□ 0.66
CHD8-208ENST00000555301 RBM6P78332 1123 aaKnown RBP19.16■□□□□ 0.66
CHD8-208ENST00000555301 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
CHD8-208ENST00000555301 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
CHD8-208ENST00000555301 NUDCQ9Y266 331 aa19.16■□□□□ 0.66
CHD8-208ENST00000555301 NBPF6Q5VWK0 638 aa19.15■□□□□ 0.66
CHD8-208ENST00000555301 NBPF4Q96M43 638 aa19.15■□□□□ 0.66
CHD8-208ENST00000555301 EYA1Q99502 592 aa19.15■□□□□ 0.66
CHD8-208ENST00000555301 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
CHD8-208ENST00000555301 RXRBP28702 533 aa19.14■□□□□ 0.65
CHD8-208ENST00000555301 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
CHD8-208ENST00000555301 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
CHD8-208ENST00000555301 IGSF1Q8N6C5 1336 aa19.13■□□□□ 0.65
CHD8-208ENST00000555301 CDCA7Q9BWT1 371 aaPredicted RBP19.12■□□□□ 0.65
CHD8-208ENST00000555301 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
CHD8-208ENST00000555301 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
CHD8-208ENST00000555301 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
CHD8-208ENST00000555301 NCAPD2Q15021 1401 aa19.1■□□□□ 0.65
CHD8-208ENST00000555301 ONECUT3O60422 494 aaPredicted RBP19.1■□□□□ 0.65
CHD8-208ENST00000555301 FAM98CQ17RN3 349 aaKnown RBP19.1■□□□□ 0.65
CHD8-208ENST00000555301 USHBP1Q8N6Y0 703 aa19.1■□□□□ 0.65
CHD8-208ENST00000555301 IL2RBP14784 551 aa19.09■□□□□ 0.65
CHD8-208ENST00000555301 RAPGEF4Q8WZA2 1011 aa19.09■□□□□ 0.65
CHD8-208ENST00000555301 GLI3P10071 1580 aa19.08■□□□□ 0.65
CHD8-208ENST00000555301 SULT6B1Q6IMI4 303 aa19.08■□□□□ 0.64
CHD8-208ENST00000555301 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
CHD8-208ENST00000555301 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
CHD8-208ENST00000555301 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
CHD8-208ENST00000555301 KDRP35968 1356 aa19.06■□□□□ 0.64
CHD8-208ENST00000555301 A0A0G2JS52 829 aa19.06■□□□□ 0.64
CHD8-208ENST00000555301 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
CHD8-208ENST00000555301 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
CHD8-208ENST00000555301 MYT1Q01538 1121 aa19.06■□□□□ 0.64
CHD8-208ENST00000555301 DISP2A7MBM2 1401 aa19.06■□□□□ 0.64
CHD8-208ENST00000555301 WDR43Q15061 677 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHD8-208ENST00000555301 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
CHD8-208ENST00000555301 HMOX1P09601 288 aa19.04■□□□□ 0.64
CHD8-208ENST00000555301 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
CHD8-208ENST00000555301 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
CHD8-208ENST00000555301 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
CHD8-208ENST00000555301 MIER1Q8N108 512 aa19.04■□□□□ 0.64
CHD8-208ENST00000555301 FCHSD2O94868 740 aa19.03■□□□□ 0.64
CHD8-208ENST00000555301 DDB1Q16531 1140 aa19.03■□□□□ 0.64
CHD8-208ENST00000555301 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
CHD8-208ENST00000555301 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
CHD8-208ENST00000555301 EXOC5O00471 708 aa19.02■□□□□ 0.64
CHD8-208ENST00000555301 OVOS2A0A0G2JMS6 1433 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms