RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
TRAFD1-208ENST00000552890 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 NFAT5O94916 1531 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 PLCH1Q4KWH8 1693 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 SOX12O15370 315 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
TRAFD1-208ENST00000552890 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
TRAFD1-208ENST00000552890 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
TRAFD1-208ENST00000552890 TCP11L2Q8N4U5 519 aa13.95□□□□□ -0.18
TRAFD1-208ENST00000552890 CRB1P82279 1406 aa13.95□□□□□ -0.18
TRAFD1-208ENST00000552890 FLT4P35916 1363 aa13.95□□□□□ -0.18
TRAFD1-208ENST00000552890 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
TRAFD1-208ENST00000552890 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-208ENST00000552890 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
TRAFD1-208ENST00000552890 MAP3K19Q56UN5 1328 aa13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 A0A0G2JS52 829 aa13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 MYT1Q01538 1121 aa13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
TRAFD1-208ENST00000552890 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 CAMTA1Q9Y6Y1 1673 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 ERBB3P21860 1342 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 HOXC9P31274 260 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 INSRP06213 1382 aa13.91□□□□□ -0.18
TRAFD1-208ENST00000552890 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
TRAFD1-208ENST00000552890 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
TRAFD1-208ENST00000552890 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.18
TRAFD1-208ENST00000552890 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
TRAFD1-208ENST00000552890 SOCS7O14512 581 aa13.89□□□□□ -0.19
TRAFD1-208ENST00000552890 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
TRAFD1-208ENST00000552890 SEPT12Q8IYM1 358 aa13.89□□□□□ -0.19
TRAFD1-208ENST00000552890 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
TRAFD1-208ENST00000552890 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 FAM98CQ17RN3 349 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 LTN1O94822 1766 aa13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-208ENST00000552890 COL18A1P39060 1754 aa13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
TRAFD1-208ENST00000552890 EXOC5O00471 708 aa13.86□□□□□ -0.19
TRAFD1-208ENST00000552890 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 IL2RBP14784 551 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 HMGB2P26583 209 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 SF3B2Q13435 895 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 RALBP1Q15311 655 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 DDB1Q16531 1140 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 FAM196AQ6ZSG2 479 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
TRAFD1-208ENST00000552890 GLI3P10071 1580 aa13.84□□□□□ -0.19
TRAFD1-208ENST00000552890 RGS12O14924 1447 aa13.84□□□□□ -0.19
TRAFD1-208ENST00000552890 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-208ENST00000552890 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-208ENST00000552890 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.2
TRAFD1-208ENST00000552890 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
TRAFD1-208ENST00000552890 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-208ENST00000552890 NUDCQ9Y266 331 aa13.82□□□□□ -0.2
TRAFD1-208ENST00000552890 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-208ENST00000552890 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-208ENST00000552890 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-208ENST00000552890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.24e-6■□□□□ 11.2
TRAFD1-208ENST00000552890 MTHFSP49914 203 aa13.8□□□□□ -0.2
TRAFD1-208ENST00000552890 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
TRAFD1-208ENST00000552890 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-208ENST00000552890 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
TRAFD1-208ENST00000552890 THSD7AQ9UPZ6 1657 aa13.79□□□□□ -0.2
TRAFD1-208ENST00000552890 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-208ENST00000552890 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
TRAFD1-208ENST00000552890 BCL9O00512 1426 aa13.78□□□□□ -0.2
TRAFD1-208ENST00000552890 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-208ENST00000552890 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
TRAFD1-208ENST00000552890 NEFMP07197 916 aa13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 FBLN1P23142 703 aa13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
TRAFD1-208ENST00000552890 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
TRAFD1-208ENST00000552890 TNS2Q63HR2 1409 aa13.76□□□□□ -0.21
TRAFD1-208ENST00000552890 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-208ENST00000552890 PARD3Q8TEW0 1356 aa13.75□□□□□ -0.21
TRAFD1-208ENST00000552890 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
TRAFD1-208ENST00000552890 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
TRAFD1-208ENST00000552890 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
TRAFD1-208ENST00000552890 EYA1Q99502 592 aa13.75□□□□□ -0.21
TRAFD1-208ENST00000552890 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
TRAFD1-208ENST00000552890 BAG6P46379 1132 aa13.74□□□□□ -0.21
TRAFD1-208ENST00000552890 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-208ENST00000552890 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms