RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ABCC6O95255 1503 aa25.47■■□□□ 1.67
PRPF40B-216ENST00000552301 CGNL1Q0VF96 1302 aa25.46■■□□□ 1.67
PRPF40B-216ENST00000552301 PANK3Q9H999 370 aa25.45■■□□□ 1.66
PRPF40B-216ENST00000552301 LTN1O94822 1766 aa25.45■■□□□ 1.66
PRPF40B-216ENST00000552301 COL18A1P39060 1754 aa25.44■■□□□ 1.66
PRPF40B-216ENST00000552301 SPATA31A1Q5TZJ5 1347 aa25.44■■□□□ 1.66
PRPF40B-216ENST00000552301 FAM98CQ17RN3 349 aaKnown RBP25.44■■□□□ 1.66
PRPF40B-216ENST00000552301 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
PRPF40B-216ENST00000552301 USP35Q9P2H5 1018 aa25.44■■□□□ 1.66
PRPF40B-216ENST00000552301 CSB-PGBD3P0DP91 1061 aa25.43■■□□□ 1.66
PRPF40B-216ENST00000552301 SEPT12Q8IYM1 358 aa25.43■■□□□ 1.66
PRPF40B-216ENST00000552301 CRB1P82279 1406 aa25.41■■□□□ 1.66
PRPF40B-216ENST00000552301 TOM1L2Q6ZVM7 507 aa25.41■■□□□ 1.66
PRPF40B-216ENST00000552301 AXIN2Q9Y2T1 843 aa25.41■■□□□ 1.66
PRPF40B-216ENST00000552301 WDR17Q8IZU2 1322 aa25.39■■□□□ 1.66
PRPF40B-216ENST00000552301 RGPD5Q99666 1765 aa25.39■■□□□ 1.66
PRPF40B-216ENST00000552301 ONECUT3O60422 494 aaPredicted RBP25.39■■□□□ 1.66
PRPF40B-216ENST00000552301 TCP11L2Q8N4U5 519 aa25.39■■□□□ 1.66
PRPF40B-216ENST00000552301 CCDC7Q96M83 1385 aa25.39■■□□□ 1.65
PRPF40B-216ENST00000552301 AMPHP49418 695 aa25.38■■□□□ 1.65
PRPF40B-216ENST00000552301 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
PRPF40B-216ENST00000552301 THRAP3Q9Y2W1 955 aaKnown RBP25.36■■□□□ 1.65
PRPF40B-216ENST00000552301 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
PRPF40B-216ENST00000552301 BLMP54132 1417 aaPredicted RBP25.36■■□□□ 1.65
PRPF40B-216ENST00000552301 BARGINQ6ZT62 677 aa25.35■■□□□ 1.65
PRPF40B-216ENST00000552301 BRWD3Q6RI45 1802 aa25.35■■□□□ 1.65
PRPF40B-216ENST00000552301 THSD7AQ9UPZ6 1657 aa25.34■■□□□ 1.65
PRPF40B-216ENST00000552301 RRS1Q15050 365 aaKnown RBP25.34■■□□□ 1.65
PRPF40B-216ENST00000552301 IP6K1Q92551 441 aa25.34■■□□□ 1.65
PRPF40B-216ENST00000552301 ERBB3P21860 1342 aa25.34■■□□□ 1.65
PRPF40B-216ENST00000552301 WASHC2AQ641Q2 1341 aa25.34■■□□□ 1.65
PRPF40B-216ENST00000552301 RTL1A6NKG5 1358 aa25.33■■□□□ 1.65
PRPF40B-216ENST00000552301 NSD2O96028 1365 aa25.33■■□□□ 1.65
PRPF40B-216ENST00000552301 FBLN1P23142 703 aa25.33■■□□□ 1.65
PRPF40B-216ENST00000552301 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
PRPF40B-216ENST00000552301 KRT27Q7Z3Y8 459 aa25.33■■□□□ 1.65
PRPF40B-216ENST00000552301 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
PRPF40B-216ENST00000552301 ANKRD24Q8TF21 1146 aa25.32■■□□□ 1.64
PRPF40B-216ENST00000552301 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
PRPF40B-216ENST00000552301 HOXC9P31274 260 aa25.3■■□□□ 1.64
PRPF40B-216ENST00000552301 CARD10Q9BWT7 1032 aa25.3■■□□□ 1.64
PRPF40B-216ENST00000552301 UPF1Q92900 1129 aaKnown RBP eCLIP25.29■■□□□ 1.64
PRPF40B-216ENST00000552301 LTV1Q96GA3 475 aaPredicted RBP25.29■■□□□ 1.64
PRPF40B-216ENST00000552301 FLT4P35916 1363 aa25.27■■□□□ 1.64
PRPF40B-216ENST00000552301 KIF24Q5T7B8 1368 aa25.27■■□□□ 1.64
PRPF40B-216ENST00000552301 SMG6Q86US8 1419 aaKnown RBP25.27■■□□□ 1.64
PRPF40B-216ENST00000552301 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
PRPF40B-216ENST00000552301 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
PRPF40B-216ENST00000552301 PDE3BQ13370 1112 aa25.26■■□□□ 1.63
PRPF40B-216ENST00000552301 CDCA7Q9BWT1 371 aaPredicted RBP25.26■■□□□ 1.63
PRPF40B-216ENST00000552301 PPM1GO15355 546 aaPredicted RBP25.25■■□□□ 1.63
PRPF40B-216ENST00000552301 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
PRPF40B-216ENST00000552301 WNK3Q9BYP7 1800 aa25.24■■□□□ 1.63
PRPF40B-216ENST00000552301 EMILIN1Q9Y6C2 1016 aa25.24■■□□□ 1.63
PRPF40B-216ENST00000552301 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
PRPF40B-216ENST00000552301 INSRP06213 1382 aa25.21■■□□□ 1.63
PRPF40B-216ENST00000552301 PEAK1Q9H792 1746 aa25.21■■□□□ 1.63
PRPF40B-216ENST00000552301 DDB1Q16531 1140 aa25.21■■□□□ 1.63
PRPF40B-216ENST00000552301 MAP2P11137 1827 aaKnown RBP25.21■■□□□ 1.63
PRPF40B-216ENST00000552301 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.62
PRPF40B-216ENST00000552301 LRRC37A3O60309 1634 aa25.19■■□□□ 1.62
PRPF40B-216ENST00000552301 HSP90AB2PQ58FF8 381 aa25.19■■□□□ 1.62
PRPF40B-216ENST00000552301 SF3B2Q13435 895 aaKnown RBP25.18■■□□□ 1.62
PRPF40B-216ENST00000552301 FAM182BQ5T319 152 aa25.18■■□□□ 1.62
PRPF40B-216ENST00000552301 CCDC125Q86Z20 511 aa25.18■■□□□ 1.62
PRPF40B-216ENST00000552301 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
PRPF40B-216ENST00000552301 PER1O15534 1290 aaPredicted RBP25.17■■□□□ 1.62
PRPF40B-216ENST00000552301 IL2RBP14784 551 aa25.17■■□□□ 1.62
PRPF40B-216ENST00000552301 POLKQ9UBT6 870 aa25.17■■□□□ 1.62
PRPF40B-216ENST00000552301 CC2D1BQ5T0F9 858 aaKnown RBP25.16■■□□□ 1.62
PRPF40B-216ENST00000552301 FAM196AQ6ZSG2 479 aa25.16■■□□□ 1.62
PRPF40B-216ENST00000552301 EXOC5O00471 708 aa25.14■■□□□ 1.62
PRPF40B-216ENST00000552301 TNS2Q63HR2 1409 aa25.13■■□□□ 1.61
PRPF40B-216ENST00000552301 CNGB1Q14028 1251 aaPredicted RBP25.13■■□□□ 1.61
PRPF40B-216ENST00000552301 NPC1L1Q9UHC9 1359 aa25.13■■□□□ 1.61
PRPF40B-216ENST00000552301 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
PRPF40B-216ENST00000552301 OVOS2A0A0G2JMS6 1433 aa25.12■■□□□ 1.61
PRPF40B-216ENST00000552301 NBPF6Q5VWK0 638 aa25.11■■□□□ 1.61
PRPF40B-216ENST00000552301 NBPF4Q96M43 638 aa25.11■■□□□ 1.61
PRPF40B-216ENST00000552301 USHBP1Q8N6Y0 703 aa25.09■■□□□ 1.61
PRPF40B-216ENST00000552301 RGPD1P0DJD0 1748 aa25.09■■□□□ 1.61
PRPF40B-216ENST00000552301 RAPGEF4Q8WZA2 1011 aa25.08■■□□□ 1.61
PRPF40B-216ENST00000552301 EP400Q96L91 3159 aa25.06■■□□□ 1.6
PRPF40B-216ENST00000552301 TRIM37O94972 964 aa25.05■■□□□ 1.6
PRPF40B-216ENST00000552301 BAG6P46379 1132 aa25.05■■□□□ 1.6
PRPF40B-216ENST00000552301 MARCH10Q8NA82 808 aaPredicted RBP25.05■■□□□ 1.6
PRPF40B-216ENST00000552301 MEGF6O75095 1541 aa25.04■■□□□ 1.6
PRPF40B-216ENST00000552301 TATP17735 454 aaPredicted RBP25.04■■□□□ 1.6
PRPF40B-216ENST00000552301 EIF4A2Q14240 407 aaKnown RBP25.04■■□□□ 1.6
PRPF40B-216ENST00000552301 MTHFSP49914 203 aa25.01■■□□□ 1.59
PRPF40B-216ENST00000552301 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
PRPF40B-216ENST00000552301 EYA1Q99502 592 aa25.01■■□□□ 1.59
PRPF40B-216ENST00000552301 TNS1Q9HBL0 1735 aaKnown RBP25■■□□□ 1.59
PRPF40B-216ENST00000552301 ZCRB1Q8TBF4 217 aaKnown RBP25■■□□□ 1.59
PRPF40B-216ENST00000552301 DDX54Q8TDD1 881 aaKnown RBP25■■□□□ 1.59
PRPF40B-216ENST00000552301 BCL9O00512 1426 aa24.99■■□□□ 1.59
PRPF40B-216ENST00000552301 NCAPD2Q15021 1401 aa24.98■■□□□ 1.59
PRPF40B-216ENST00000552301 APBA3O96018 575 aa24.97■■□□□ 1.59
PRPF40B-216ENST00000552301 DDX10Q13206 875 aaKnown RBP24.96■■□□□ 1.59
PRPF40B-216ENST00000552301 SBF2Q86WG5 1849 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms