RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 CABP1Q9NZU7 370 aa10.29□□□□□ -0.76
SMARCD1-210ENST00000551352 CRB1P82279 1406 aa10.29□□□□□ -0.76
SMARCD1-210ENST00000551352 CPSF1Q10570 1443 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-210ENST00000551352 PTF1AQ7RTS3 328 aa10.28□□□□□ -0.76
SMARCD1-210ENST00000551352 AXIN2Q9Y2T1 843 aa10.28□□□□□ -0.76
SMARCD1-210ENST00000551352 WASHC2AQ641Q2 1341 aa10.28□□□□□ -0.76
SMARCD1-210ENST00000551352 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.76
SMARCD1-210ENST00000551352 ROCK2O75116 1388 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-210ENST00000551352 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
SMARCD1-210ENST00000551352 SHANK3Q9BYB0 1731 aa10.27□□□□□ -0.76
SMARCD1-210ENST00000551352 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
SMARCD1-210ENST00000551352 TCP11L2Q8N4U5 519 aa10.27□□□□□ -0.77
SMARCD1-210ENST00000551352 NHSQ6T4R5 1651 aa10.27□□□□□ -0.77
SMARCD1-210ENST00000551352 CCDC7Q96M83 1385 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 CARD11Q9BXL7 1154 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 TTC21BQ7Z4L5 1316 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 BTAF1O14981 1849 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
SMARCD1-210ENST00000551352 PAPPAQ13219 1627 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 MYOM1P52179 1685 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 ABCC6O95255 1503 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 APBA3O96018 575 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 NLRP6P59044 892 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 PARD3Q8TEW0 1356 aa10.25□□□□□ -0.77
SMARCD1-210ENST00000551352 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 EVA1CP58658 441 aa10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 ARHGEF25Q86VW2 580 aa10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 FAM208AQ9UK61 1670 aaKnown RBP10.24□□□□□ -0.77
SMARCD1-210ENST00000551352 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 MARCH10Q8NA82 808 aaPredicted RBP10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 WDR17Q8IZU2 1322 aa10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 SBNO2Q9Y2G9 1366 aa10.23□□□□□ -0.77
SMARCD1-210ENST00000551352 PDE3BQ13370 1112 aa10.22□□□□□ -0.77
SMARCD1-210ENST00000551352 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-210ENST00000551352 COL24A1Q17RW2 1714 aa10.21□□□□□ -0.77
SMARCD1-210ENST00000551352 PROM2Q8N271 834 aa10.21□□□□□ -0.77
SMARCD1-210ENST00000551352 PDGFDQ9GZP0 370 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-210ENST00000551352 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
SMARCD1-210ENST00000551352 BCL9O00512 1426 aa10.21□□□□□ -0.78
SMARCD1-210ENST00000551352 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.78
SMARCD1-210ENST00000551352 QSER1Q2KHR3 1735 aa10.2□□□□□ -0.78
SMARCD1-210ENST00000551352 TNS2Q63HR2 1409 aa10.2□□□□□ -0.78
SMARCD1-210ENST00000551352 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-210ENST00000551352 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
SMARCD1-210ENST00000551352 DOT1LQ8TEK3 1739 aa10.2□□□□□ -0.78
SMARCD1-210ENST00000551352 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 SOX12O15370 315 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 TOM1L2Q6ZVM7 507 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 NME9Q86XW9 330 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 KIF20BQ96Q89 1820 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 LY75O60449 1722 aa10.19□□□□□ -0.78
SMARCD1-210ENST00000551352 A0A1W2PP64 1363 aa10.18□□□□□ -0.78
SMARCD1-210ENST00000551352 ANP32CO43423 234 aa10.18□□□□□ -0.78
SMARCD1-210ENST00000551352 DDB1Q16531 1140 aa10.18□□□□□ -0.78
SMARCD1-210ENST00000551352 CARD10Q9BWT7 1032 aa10.17□□□□□ -0.78
SMARCD1-210ENST00000551352 PLSCR1O15162 318 aa10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 KCNQ2O43526 872 aa10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 SLC12A5Q9H2X9 1139 aa10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 EDC4Q6P2E9 1401 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-210ENST00000551352 ERBB3P21860 1342 aa10.15□□□□□ -0.78
SMARCD1-210ENST00000551352 CCER2I3L3R5 266 aa10.15□□□□□ -0.78
SMARCD1-210ENST00000551352 KCNH5Q8NCM2 988 aa10.15□□□□□ -0.78
SMARCD1-210ENST00000551352 TESK2Q96S53 571 aa10.15□□□□□ -0.78
SMARCD1-210ENST00000551352 BCL11BQ9C0K0 894 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-210ENST00000551352 CHD4Q14839 1912 aa10.15□□□□□ -0.79
SMARCD1-210ENST00000551352 TOGARAM1Q9Y4F4 1720 aa10.14□□□□□ -0.79
SMARCD1-210ENST00000551352 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
SMARCD1-210ENST00000551352 ANKRD26Q9UPS8 1709 aa10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 ITGB4P16144 1822 aa10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 CENPBP07199 599 aaPredicted RBP10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 FBLN1P23142 703 aa10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 PTGER2P43116 358 aa10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 YTHDC1Q96MU7 727 aaKnown RBP10.13□□□□□ -0.79
SMARCD1-210ENST00000551352 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
SMARCD1-210ENST00000551352 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
SMARCD1-210ENST00000551352 POLR3GLQ9BT43 218 aa10.12□□□□□ -0.79
SMARCD1-210ENST00000551352 CDCA7Q9BWT1 371 aaPredicted RBP10.12□□□□□ -0.79
SMARCD1-210ENST00000551352 MEGF6O75095 1541 aa10.12□□□□□ -0.79
SMARCD1-210ENST00000551352 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 ANKRD24Q8TF21 1146 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 SGIP1Q9BQI5 828 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 NSD2O96028 1365 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
SMARCD1-210ENST00000551352 ZBTB7AO95365 584 aa10.1□□□□□ -0.79
SMARCD1-210ENST00000551352 TMF1P82094 1093 aa10.1□□□□□ -0.79
SMARCD1-210ENST00000551352 ZNF827Q17R98 1081 aa10.1□□□□□ -0.79
SMARCD1-210ENST00000551352 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
SMARCD1-210ENST00000551352 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-210ENST00000551352 C5P01031 1676 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms