RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SCUBE3Q8IX30 993 aa5.9□□□□□ -1.47
APAF1-208ENST00000549007 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
APAF1-208ENST00000549007 IGF1RP08069 1367 aa5.89□□□□□ -1.47
APAF1-208ENST00000549007 PNMA1Q8ND90 353 aa5.89□□□□□ -1.47
APAF1-208ENST00000549007 CARD14Q9BXL6 1004 aa5.89□□□□□ -1.47
APAF1-208ENST00000549007 FAM205CA6NFA0 338 aa5.89□□□□□ -1.47
APAF1-208ENST00000549007 F12P00748 615 aaPredicted RBP5.89□□□□□ -1.47
APAF1-208ENST00000549007 KIAA1024Q9UPX6 916 aa5.89□□□□□ -1.47
APAF1-208ENST00000549007 CHMP7Q8WUX9 453 aaPredicted RBP5.89□□□□□ -1.47
APAF1-208ENST00000549007 ACTN4O43707 911 aaKnown RBP5.88□□□□□ -1.47
APAF1-208ENST00000549007 CLDN10P78369 228 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 FAM69CQ0P6D2 419 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 LRCH3Q96II8 777 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 PRMT3O60678 531 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 PTK7Q13308 1070 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 RNF135Q8IUD6 432 aa5.88□□□□□ -1.47
APAF1-208ENST00000549007 COPS2P61201 443 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 DPYDQ12882 1025 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 MRPL50Q8N5N7 158 aaKnown RBP5.87□□□□□ -1.47
APAF1-208ENST00000549007 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.87□□□□□ -1.47
APAF1-208ENST00000549007 PATL2C9JE40 543 aaKnown RBP5.87□□□□□ -1.47
APAF1-208ENST00000549007 SSFA2P28290 1259 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 MTMR3Q13615 1198 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 SLFNL1Q499Z3 407 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 NBPF3Q9H094 633 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 MAGEB6P1A0A0J9YX57 407 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 TLL1O43897 1013 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 BRICD5Q6PL45 260 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 TXNDC2Q86VQ3 553 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 PLPP7Q8NBV4 271 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 CEP126Q9P2H0 1117 aa5.87□□□□□ -1.47
APAF1-208ENST00000549007 BIN2Q9UBW5 565 aaPredicted RBP5.87□□□□□ -1.47
APAF1-208ENST00000549007 ADAMTS12P58397 1594 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 ZNF211Q13398 564 aaPredicted RBP5.86□□□□□ -1.47
APAF1-208ENST00000549007 PRIMPOLQ96LW4 560 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 CARMIL1Q5VZK9 1371 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 CHD1O14646 1710 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 BHMG1C9JSJ3 638 aaPredicted RBP5.86□□□□□ -1.47
APAF1-208ENST00000549007 TAGLNQ01995 201 aaKnown RBP5.86□□□□□ -1.47
APAF1-208ENST00000549007 DESI1Q6ICB0 168 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 CAPN12Q6ZSI9 719 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 ADAM32Q8TC27 787 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 ERICH3Q5RHP9 1530 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 MAGI1Q96QZ7 1491 aaPredicted RBP5.86□□□□□ -1.47
APAF1-208ENST00000549007 ABL1P00519 1130 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 EMP3P54852 163 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 MKNK1Q9BUB5 465 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 HPS5Q9UPZ3 1129 aa5.86□□□□□ -1.47
APAF1-208ENST00000549007 GNEQ9Y223 722 aaKnown RBP5.86□□□□□ -1.47
APAF1-208ENST00000549007 POTEB3A0JP26 581 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 ATP2B4P23634 1241 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 Q3C1V9 767 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 POTEBQ6S5H4 581 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 CCER1Q8TC90 406 aaPredicted RBP5.85□□□□□ -1.47
APAF1-208ENST00000549007 THAP11Q96EK4 314 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 PCDHB3Q9Y5E6 796 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 SYNJ2O15056 1496 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 FHAD1B1AJZ9 1412 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 OXLD1Q5BKU9 147 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 FAM200AQ8TCP9 573 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 OTUD5Q96G74 571 aa5.85□□□□□ -1.47
APAF1-208ENST00000549007 KIAA1522Q9P206 1035 aaPredicted RBP5.85□□□□□ -1.47
APAF1-208ENST00000549007 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 SNPHO15079 494 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 LARP1Q6PKG0 1096 aaKnown RBP5.84□□□□□ -1.47
APAF1-208ENST00000549007 CCDC24Q8N4L8 307 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 GRIN2AQ12879 1464 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 RAB15P59190 212 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 DNAJC14Q6Y2X3 702 aaPredicted RBP5.84□□□□□ -1.47
APAF1-208ENST00000549007 ANKMY2Q8IV38 441 aa5.84□□□□□ -1.47
APAF1-208ENST00000549007 RAPGEF2Q9Y4G8 1499 aa5.84□□□□□ -1.48
APAF1-208ENST00000549007 JUNDP17535 347 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 FAM160A2Q8N612 972 aaPredicted RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 CDCA7Q9BWT1 371 aaPredicted RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 ST18O60284 1047 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 PPP4CP60510 307 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 PTCRAQ6ISU1 281 aaPredicted RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 SFI1A8K8P3 1242 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 CCNYL3P0C7X3 344 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 ELOAQ14241 798 aaKnown RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 PTPRNQ16849 979 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 LINC01559Q495D7 138 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 MAMSTRQ6ZN01 415 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 MRRFQ96E11 262 aaKnown RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 CCDC85AQ96PX6 553 aaPredicted RBP5.83□□□□□ -1.48
APAF1-208ENST00000549007 WBP1LQ9NX94 342 aa5.83□□□□□ -1.48
APAF1-208ENST00000549007 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
APAF1-208ENST00000549007 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 CUL7Q14999 1698 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 PRXQ9BXM0 1461 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 SOWAHDA6NJG2 315 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 STAU1O95793 577 aaKnown RBP5.82□□□□□ -1.48
APAF1-208ENST00000549007 ADGRD1Q6QNK2 874 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 PURBQ96QR8 312 aaKnown RBP5.82□□□□□ -1.48
APAF1-208ENST00000549007 SLC4A5Q9BY07 1137 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 CEP170Q5SW79 1584 aa5.82□□□□□ -1.48
APAF1-208ENST00000549007 EEA1Q15075 1411 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms