RNA–Protein interactions for RNA: ENST00000547494.5

NPIPB2-206, Transcript of nuclear pore complex interacting protein family, member B2, human

APPRIS ALT2 TSL 5

Gene NPIPB2, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB2-206	ENST00000547494	VAMP1	P23763	118 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	LSM11	P83369	360 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	PSME1	Q06323	249 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	SDE2	Q6IQ49	451 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CLEC4G	Q6UXB4	293 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	LNPK	Q9C0E8	428 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	COMMD10	Q9Y6G5	202 aa		10.45	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ABCC8	Q09428	1581 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CLASP1	Q7Z460	1538 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	EXOC5	O00471	708 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	WDHD1	O75717	1129 aa	Predicted RBP	10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	EGFLAM	Q63HQ2	1017 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	REPIN1	Q9BWE0	567 aa	Known RBP	10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	JADE2	Q9NQC1	790 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	FAM198A	Q9UFP1	575 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	AXIN2	Q9Y2T1	843 aa		10.44	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ERCC5	P28715	1186 aa	Predicted RBP	10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	PRSS12	P56730	875 aa		10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ANKRD13D	Q6ZTN6	518 aa		10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	PNISR	Q8TF01	805 aa	Known RBP	10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CDCA7L	Q96GN5	454 aa		10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	SPACA7	Q96KW9	195 aa		10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ADGRG1	Q9Y653	693 aa		10.43	□□□□□ -0.74
NPIPB2-206	ENST00000547494	EEA1	Q15075	1411 aa		10.42	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CLGN	O14967	610 aa		10.42	□□□□□ -0.74
NPIPB2-206	ENST00000547494	MARS	P56192	900 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ZCRB1	Q8TBF4	217 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB2-206	ENST00000547494	WWC3	Q9ULE0	1092 aa		10.42	□□□□□ -0.74
NPIPB2-206	ENST00000547494	TARBP1	Q13395	1621 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	POM121C	A8CG34	1229 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	PTPRE	P23469	700 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CCDC146	Q8IYE0	955 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	NLRP7	Q8WX94	980 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	TANGO6	Q9C0B7	1094 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	GDPD2	Q9HCC8	539 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	SNRK	Q9NRH2	765 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	GABBR1	Q9UBS5	961 aa		10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	NOP58	Q9Y2X3	529 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB2-206	ENST00000547494	PPP1R3G	B7ZBB8	358 aa		10.4	□□□□□ -0.74
NPIPB2-206	ENST00000547494	C3orf80	F5H4A9	247 aa		10.4	□□□□□ -0.74
NPIPB2-206	ENST00000547494	ARHGAP33	O14559	1287 aa		10.4	□□□□□ -0.74
NPIPB2-206	ENST00000547494	CASC1	Q6TDU7	716 aa		10.4	□□□□□ -0.74
NPIPB2-206	ENST00000547494	METTL3	Q86U44	580 aa	Known RBP	10.4	□□□□□ -0.74
NPIPB2-206	ENST00000547494	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.4	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TOPBP1	Q92547	1522 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	SYNJ2	O15056	1496 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	MS4A1	P11836	297 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	SRPK2	P78362	688 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	SDR16C5	Q8N3Y7	309 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	PXYLP1	Q8TE99	480 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	KCNK17	Q96T54	332 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TMUB1	Q9BVT8	246 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TSKS	Q9UJT2	592 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	BIVM-ERCC5	R4GMW8	1640 aa		10.39	□□□□□ -0.75
NPIPB2-206	ENST00000547494	AQR	O60306	1485 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	MDM2	Q00987	491 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	C4orf46	Q504U0	113 aa		10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	BANK1	Q8NDB2	785 aa		10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	CXorf38	Q8TB03	319 aa		10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	GNL3L	Q9NVN8	582 aa	Known RBP	10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	SYNJ1	O43426	1573 aa		10.38	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TOP2B	Q02880	1626 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TMEM88B	A6NKF7	163 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	NRDC	O43847	1150 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	ABL2	P42684	1182 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	CFAP70	Q5T0N1	1121 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	NPAS4	Q8IUM7	802 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	AMOTL1	Q8IY63	956 aa		10.37	□□□□□ -0.75
NPIPB2-206	ENST00000547494	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	OAT	P04181	439 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	HSP90AA1	P07900	732 aa	Known RBP	10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	PSEN2	P49810	448 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	BIRC2	Q13490	618 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	CCDC144B	Q3MJ40	725 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	CACTIN-AS1	Q8N1I8	211 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	RNF166	Q96A37	237 aa	Predicted RBP	10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TRIM34	Q9BYJ4	488 aa		10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TMX4	Q9H1E5	349 aa	Predicted RBP	10.36	□□□□□ -0.75
NPIPB2-206	ENST00000547494	HOXA2	O43364	376 aa		10.35	□□□□□ -0.75
NPIPB2-206	ENST00000547494	RECK	O95980	971 aa		10.35	□□□□□ -0.75
NPIPB2-206	ENST00000547494	PROX2	Q3B8N5	592 aa		10.35	□□□□□ -0.75
NPIPB2-206	ENST00000547494	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB2-206	ENST00000547494	BRINP2	Q9C0B6	783 aa		10.35	□□□□□ -0.75
NPIPB2-206	ENST00000547494	NOM1	Q5C9Z4	860 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	RNF187	Q5TA31	235 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	C11orf96	Q7Z7L8	435 aa		10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	PRM3	Q9NNZ6	103 aa		10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	GPCPD1	Q9NPB8	672 aa		10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	BSDC1	Q9NW68	430 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB2-206	ENST00000547494	TTC36	A6NLP5	189 aa		10.33	□□□□□ -0.76
NPIPB2-206	ENST00000547494	TRIM6-TRIM34	B2RNG4	842 aa		10.33	□□□□□ -0.76
NPIPB2-206	ENST00000547494	ZNF500	O60304	480 aa	Predicted RBP	10.33	□□□□□ -0.76
NPIPB2-206	ENST00000547494	CLCN1	P35523	988 aa		10.33	□□□□□ -0.76
NPIPB2-206	ENST00000547494	TSNAXIP1	Q2TAA8	658 aa		10.33	□□□□□ -0.76
NPIPB2-206	ENST00000547494	HDGFL1	Q5TGJ6	251 aa		10.33	□□□□□ -0.76

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