RNA–Protein interactions for RNA: ENST00000547494.5

NPIPB2-206, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

APPRIS ALT2 TSL 5

Gene NPIPB2, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-206ENST00000547494 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
NPIPB2-206ENST00000547494 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
NPIPB2-206ENST00000547494 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
NPIPB2-206ENST00000547494 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
NPIPB2-206ENST00000547494 FOXD1Q16676 465 aa19.25■□□□□ 0.67
NPIPB2-206ENST00000547494 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
NPIPB2-206ENST00000547494 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
NPIPB2-206ENST00000547494 ADRA2BP18089 450 aa18.14■□□□□ 0.49
NPIPB2-206ENST00000547494 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
NPIPB2-206ENST00000547494 MSH5O43196 834 aa17.89■□□□□ 0.45
NPIPB2-206ENST00000547494 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
NPIPB2-206ENST00000547494 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
NPIPB2-206ENST00000547494 KCNA4P22459 653 aa16.63■□□□□ 0.25
NPIPB2-206ENST00000547494 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
NPIPB2-206ENST00000547494 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
NPIPB2-206ENST00000547494 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
NPIPB2-206ENST00000547494 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
NPIPB2-206ENST00000547494 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
NPIPB2-206ENST00000547494 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
NPIPB2-206ENST00000547494 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
NPIPB2-206ENST00000547494 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
NPIPB2-206ENST00000547494 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
NPIPB2-206ENST00000547494 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
NPIPB2-206ENST00000547494 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
NPIPB2-206ENST00000547494 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
NPIPB2-206ENST00000547494 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
NPIPB2-206ENST00000547494 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
NPIPB2-206ENST00000547494 ZBTB22O15209 634 aa15.36■□□□□ 0.05
NPIPB2-206ENST00000547494 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
NPIPB2-206ENST00000547494 DAXXQ9UER7 740 aaPredicted RBP15.31■□□□□ 0.04
NPIPB2-206ENST00000547494 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
NPIPB2-206ENST00000547494 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
NPIPB2-206ENST00000547494 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
NPIPB2-206ENST00000547494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
NPIPB2-206ENST00000547494 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
NPIPB2-206ENST00000547494 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
NPIPB2-206ENST00000547494 SLC4A2P04920 1241 aa15.08■□□□□ 0
NPIPB2-206ENST00000547494 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
NPIPB2-206ENST00000547494 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
NPIPB2-206ENST00000547494 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
NPIPB2-206ENST00000547494 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
NPIPB2-206ENST00000547494 ARXQ96QS3 562 aa14.58□□□□□ -0.08
NPIPB2-206ENST00000547494 CAPN15O75808 1086 aa14.55□□□□□ -0.08
NPIPB2-206ENST00000547494 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
NPIPB2-206ENST00000547494 MYT1Q01538 1121 aa14.54□□□□□ -0.08
NPIPB2-206ENST00000547494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
NPIPB2-206ENST00000547494 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
NPIPB2-206ENST00000547494 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
NPIPB2-206ENST00000547494 PRKCSHP14314 528 aaPredicted RBP14.48□□□□□ -0.09
NPIPB2-206ENST00000547494 APLP2Q06481 763 aa14.48□□□□□ -0.09
NPIPB2-206ENST00000547494 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
NPIPB2-206ENST00000547494 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
NPIPB2-206ENST00000547494 DSG3P32926 999 aa14.42□□□□□ -0.1
NPIPB2-206ENST00000547494 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
NPIPB2-206ENST00000547494 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
NPIPB2-206ENST00000547494 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
NPIPB2-206ENST00000547494 RANGAP1P46060 587 aaPredicted RBP14.29□□□□□ -0.12
NPIPB2-206ENST00000547494 ABCB7O75027 752 aa14.25□□□□□ -0.13
NPIPB2-206ENST00000547494 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
NPIPB2-206ENST00000547494 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
NPIPB2-206ENST00000547494 BCANQ96GW7 911 aa14.2□□□□□ -0.14
NPIPB2-206ENST00000547494 TIMELESSQ9UNS1 1208 aa14.2□□□□□ -0.14
NPIPB2-206ENST00000547494 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
NPIPB2-206ENST00000547494 TULP1O00294 542 aaPredicted RBP14.08□□□□□ -0.16
NPIPB2-206ENST00000547494 POLA2Q14181 598 aa14.05□□□□□ -0.16
NPIPB2-206ENST00000547494 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
NPIPB2-206ENST00000547494 FKBP8Q14318 412 aa13.96□□□□□ -0.17
NPIPB2-206ENST00000547494 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
NPIPB2-206ENST00000547494 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
NPIPB2-206ENST00000547494 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
NPIPB2-206ENST00000547494 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
NPIPB2-206ENST00000547494 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
NPIPB2-206ENST00000547494 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
NPIPB2-206ENST00000547494 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.21
NPIPB2-206ENST00000547494 FBLN2P98095 1184 aa13.65□□□□□ -0.22
NPIPB2-206ENST00000547494 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
NPIPB2-206ENST00000547494 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
NPIPB2-206ENST00000547494 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
NPIPB2-206ENST00000547494 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
NPIPB2-206ENST00000547494 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
NPIPB2-206ENST00000547494 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
NPIPB2-206ENST00000547494 PROM2Q8N271 834 aa13.46□□□□□ -0.25
NPIPB2-206ENST00000547494 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
NPIPB2-206ENST00000547494 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
NPIPB2-206ENST00000547494 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
NPIPB2-206ENST00000547494 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
NPIPB2-206ENST00000547494 POTEHQ6S545 545 aa13.41□□□□□ -0.26
NPIPB2-206ENST00000547494 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
NPIPB2-206ENST00000547494 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
NPIPB2-206ENST00000547494 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
NPIPB2-206ENST00000547494 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
NPIPB2-206ENST00000547494 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
NPIPB2-206ENST00000547494 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
NPIPB2-206ENST00000547494 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
NPIPB2-206ENST00000547494 ABCC9O60706 1549 aa13.25□□□□□ -0.29
NPIPB2-206ENST00000547494 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
NPIPB2-206ENST00000547494 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
NPIPB2-206ENST00000547494 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
NPIPB2-206ENST00000547494 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
NPIPB2-206ENST00000547494 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms