RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
MDM2-228ENST00000542502 DDRGK1Q96HY6 314 aa9.39□□□□□ -0.91
MDM2-228ENST00000542502 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
MDM2-228ENST00000542502 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.39□□□□□ -0.91
MDM2-228ENST00000542502 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
MDM2-228ENST00000542502 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
MDM2-228ENST00000542502 PROCA1Q8NCQ7 364 aaPredicted RBP9.38□□□□□ -0.91
MDM2-228ENST00000542502 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
MDM2-228ENST00000542502 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
MDM2-228ENST00000542502 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
MDM2-228ENST00000542502 FAM117AQ9C073 453 aa9.37□□□□□ -0.91
MDM2-228ENST00000542502 NR6A1Q15406 480 aa9.36□□□□□ -0.91
MDM2-228ENST00000542502 PPP1R26Q5T8A7 1209 aaPredicted RBP9.36□□□□□ -0.91
MDM2-228ENST00000542502 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
MDM2-228ENST00000542502 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
MDM2-228ENST00000542502 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
MDM2-228ENST00000542502 CDV3Q9UKY7 258 aaKnown RBP9.36□□□□□ -0.91
MDM2-228ENST00000542502 PPFIA3O75145 1194 aa9.35□□□□□ -0.91
MDM2-228ENST00000542502 ZBTB33Q86T24 672 aa9.35□□□□□ -0.91
MDM2-228ENST00000542502 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
MDM2-228ENST00000542502 Q6ZVU0 165 aa9.34□□□□□ -0.91
MDM2-228ENST00000542502 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
MDM2-228ENST00000542502 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
MDM2-228ENST00000542502 PTK2Q05397 1052 aa9.33□□□□□ -0.92
MDM2-228ENST00000542502 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
MDM2-228ENST00000542502 AP1G2O75843 785 aa9.32□□□□□ -0.92
MDM2-228ENST00000542502 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
MDM2-228ENST00000542502 CBLBQ13191 982 aa9.32□□□□□ -0.92
MDM2-228ENST00000542502 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
MDM2-228ENST00000542502 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
MDM2-228ENST00000542502 SPINT1O43278 529 aa9.3□□□□□ -0.92
MDM2-228ENST00000542502 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
MDM2-228ENST00000542502 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
MDM2-228ENST00000542502 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
MDM2-228ENST00000542502 PTSQ03393 145 aa9.28□□□□□ -0.92
MDM2-228ENST00000542502 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
MDM2-228ENST00000542502 BCANQ96GW7 911 aa9.28□□□□□ -0.92
MDM2-228ENST00000542502 USP17L8P0C7I0 530 aa9.27□□□□□ -0.93
MDM2-228ENST00000542502 NBPF20Q3BBV1 942 aa9.27□□□□□ -0.93
MDM2-228ENST00000542502 HMX1Q9NP08 348 aaPredicted RBP9.27□□□□□ -0.93
MDM2-228ENST00000542502 FIGNL2A6NMB9 653 aa9.26□□□□□ -0.93
MDM2-228ENST00000542502 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
MDM2-228ENST00000542502 RFC5P40937 340 aa9.24□□□□□ -0.93
MDM2-228ENST00000542502 RELBQ01201 579 aa9.23□□□□□ -0.93
MDM2-228ENST00000542502 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
MDM2-228ENST00000542502 GPR161Q8N6U8 529 aaKnown RBP9.23□□□□□ -0.93
MDM2-228ENST00000542502 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
MDM2-228ENST00000542502 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
MDM2-228ENST00000542502 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
MDM2-228ENST00000542502 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
MDM2-228ENST00000542502 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
MDM2-228ENST00000542502 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
MDM2-228ENST00000542502 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
MDM2-228ENST00000542502 KRT76Q01546 638 aa9.21□□□□□ -0.94
MDM2-228ENST00000542502 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
MDM2-228ENST00000542502 ESPNB1AK53 854 aa9.2□□□□□ -0.94
MDM2-228ENST00000542502 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
MDM2-228ENST00000542502 RAB15P59190 212 aa9.2□□□□□ -0.94
MDM2-228ENST00000542502 LILRA1O75019 489 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 ADH1AP07327 375 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
MDM2-228ENST00000542502 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
MDM2-228ENST00000542502 POLMQ9NP87 494 aaPredicted RBP9.19□□□□□ -0.94
MDM2-228ENST00000542502 ITGA6P23229 1130 aa9.18□□□□□ -0.94
MDM2-228ENST00000542502 ADD1P35611 737 aaKnown RBP9.18□□□□□ -0.94
MDM2-228ENST00000542502 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
MDM2-228ENST00000542502 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
MDM2-228ENST00000542502 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
MDM2-228ENST00000542502 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
MDM2-228ENST00000542502 PTGIRP43119 386 aa9.16□□□□□ -0.94
MDM2-228ENST00000542502 KDF1Q8NAX2 398 aaPredicted RBP9.16□□□□□ -0.94
MDM2-228ENST00000542502 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
MDM2-228ENST00000542502 VWA5B2Q8N398 1253 aa9.15□□□□□ -0.94
MDM2-228ENST00000542502 TRIM52Q96A61 297 aa9.15□□□□□ -0.94
MDM2-228ENST00000542502 ZBBXA8MT70 800 aa9.14□□□□□ -0.95
MDM2-228ENST00000542502 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
MDM2-228ENST00000542502 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
MDM2-228ENST00000542502 SV2AQ7L0J3 742 aa9.14□□□□□ -0.95
MDM2-228ENST00000542502 CDC14CA4D256 554 aa9.13□□□□□ -0.95
MDM2-228ENST00000542502 KCNMA1Q12791 1236 aa9.13□□□□□ -0.95
MDM2-228ENST00000542502 GJD4Q96KN9 370 aaPredicted RBP9.12□□□□□ -0.95
MDM2-228ENST00000542502 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
MDM2-228ENST00000542502 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
MDM2-228ENST00000542502 NEUROD2Q15784 382 aa9.11□□□□□ -0.95
MDM2-228ENST00000542502 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
MDM2-228ENST00000542502 IL27Q8NEV9 243 aa9.11□□□□□ -0.95
MDM2-228ENST00000542502 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
MDM2-228ENST00000542502 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
MDM2-228ENST00000542502 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
MDM2-228ENST00000542502 GSK3AP49840 483 aa9.1□□□□□ -0.95
MDM2-228ENST00000542502 RNF144AP50876 292 aaPredicted RBP9.1□□□□□ -0.95
MDM2-228ENST00000542502 CCDC125Q86Z20 511 aa9.1□□□□□ -0.95
MDM2-228ENST00000542502 ADAMTS8Q9UP79 889 aa9.1□□□□□ -0.95
MDM2-228ENST00000542502 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
MDM2-228ENST00000542502 ATP5J2-PTCD1G3V325 749 aa9.08□□□□□ -0.96
MDM2-228ENST00000542502 SVOPQ8N4V2 548 aa9.08□□□□□ -0.96
MDM2-228ENST00000542502 PRICKLE2Q7Z3G6 844 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms