RNA–Protein interactions for RNA: ENST00000536590.1

CD4-206, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 561 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-206ENST00000536590 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
CD4-206ENST00000536590 LRP6O75581 1613 aa11.17□□□□□ -0.62
CD4-206ENST00000536590 MAP3K19Q56UN5 1328 aa11.16□□□□□ -0.62
CD4-206ENST00000536590 ANP32CO43423 234 aa11.16□□□□□ -0.62
CD4-206ENST00000536590 RXRBP28702 533 aa11.16□□□□□ -0.62
CD4-206ENST00000536590 RBM6P78332 1123 aaKnown RBP11.16□□□□□ -0.62
CD4-206ENST00000536590 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
CD4-206ENST00000536590 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
CD4-206ENST00000536590 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
CD4-206ENST00000536590 HOXC9P31274 260 aa11.15□□□□□ -0.62
CD4-206ENST00000536590 CNGB1Q14028 1251 aaPredicted RBP11.15□□□□□ -0.62
CD4-206ENST00000536590 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
CD4-206ENST00000536590 NUDCQ9Y266 331 aa11.15□□□□□ -0.62
CD4-206ENST00000536590 COL14A1Q05707 1796 aaKnown RBP11.15□□□□□ -0.62
CD4-206ENST00000536590 SLIT2O94813 1529 aa11.14□□□□□ -0.63
CD4-206ENST00000536590 WDR17Q8IZU2 1322 aa11.14□□□□□ -0.63
CD4-206ENST00000536590 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
CD4-206ENST00000536590 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
CD4-206ENST00000536590 INSRP06213 1382 aa11.14□□□□□ -0.63
CD4-206ENST00000536590 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
CD4-206ENST00000536590 A0A0G2JS52 829 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 MYT1Q01538 1121 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 NLRP2Q9NX02 1062 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 NFAT5O94916 1531 aa11.13□□□□□ -0.63
CD4-206ENST00000536590 PHRF1Q9P1Y6 1649 aaKnown RBP11.13□□□□□ -0.63
CD4-206ENST00000536590 ERBB3P21860 1342 aa11.12□□□□□ -0.63
CD4-206ENST00000536590 CARD10Q9BWT7 1032 aa11.12□□□□□ -0.63
CD4-206ENST00000536590 CRB1P82279 1406 aa11.11□□□□□ -0.63
CD4-206ENST00000536590 NEFMP07197 916 aa11.11□□□□□ -0.63
CD4-206ENST00000536590 MTHFSP49914 203 aa11.11□□□□□ -0.63
CD4-206ENST00000536590 LTV1Q96GA3 475 aaPredicted RBP11.11□□□□□ -0.63
CD4-206ENST00000536590 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
CD4-206ENST00000536590 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
CD4-206ENST00000536590 BCL9LQ86UU0 1499 aa11.11□□□□□ -0.63
CD4-206ENST00000536590 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 MYBBP1AQ9BQG0 1328 aaKnown RBP11.1□□□□□ -0.63
CD4-206ENST00000536590 ATRNO75882 1429 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 NWD2Q9ULI1 1742 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
CD4-206ENST00000536590 NCBP3Q53F19 620 aaKnown RBP11.1□□□□□ -0.63
CD4-206ENST00000536590 LARP1Q6PKG0 1096 aaKnown RBP11.1□□□□□ -0.63
CD4-206ENST00000536590 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
CD4-206ENST00000536590 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
CD4-206ENST00000536590 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 CDK12Q9NYV4 1490 aaPredicted RBP11.09□□□□□ -0.63
CD4-206ENST00000536590 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 KCNA4P22459 653 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 HSP90AB2PQ58FF8 381 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
CD4-206ENST00000536590 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
CD4-206ENST00000536590 PRKRIP1Q9H875 184 aaPredicted RBP11.08□□□□□ -0.64
CD4-206ENST00000536590 MARF1Q9Y4F3 1742 aaKnown RBP11.08□□□□□ -0.64
CD4-206ENST00000536590 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
CD4-206ENST00000536590 ANKRD26Q9UPS8 1709 aa11.07□□□□□ -0.64
CD4-206ENST00000536590 CRYBG1Q9Y4K1 1723 aa11.07□□□□□ -0.64
CD4-206ENST00000536590 IL2RBP14784 551 aa11.07□□□□□ -0.64
CD4-206ENST00000536590 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
CD4-206ENST00000536590 FBLN1P23142 703 aa11.07□□□□□ -0.64
CD4-206ENST00000536590 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
CD4-206ENST00000536590 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
CD4-206ENST00000536590 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
CD4-206ENST00000536590 EXOC5O00471 708 aa11.06□□□□□ -0.64
CD4-206ENST00000536590 EIF4A2Q14240 407 aaKnown RBP11.06□□□□□ -0.64
CD4-206ENST00000536590 POTEAQ6S8J7 498 aa11.06□□□□□ -0.64
CD4-206ENST00000536590 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
CD4-206ENST00000536590 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.06□□□□□ -0.64
CD4-206ENST00000536590 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
CD4-206ENST00000536590 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
CD4-206ENST00000536590 WDR43Q15061 677 aaKnown RBP eCLIP11.05□□□□□ -0.64
CD4-206ENST00000536590 DDB1Q16531 1140 aa11.05□□□□□ -0.64
CD4-206ENST00000536590 SEPT12Q8IYM1 358 aa11.05□□□□□ -0.64
CD4-206ENST00000536590 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
CD4-206ENST00000536590 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
CD4-206ENST00000536590 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
CD4-206ENST00000536590 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
CD4-206ENST00000536590 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
CD4-206ENST00000536590 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
CD4-206ENST00000536590 IL13P35225 146 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
CD4-206ENST00000536590 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 DIEXFQ68CQ4 756 aaKnown RBP11.03□□□□□ -0.64
CD4-206ENST00000536590 KRT27Q7Z3Y8 459 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 EYA1Q99502 592 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
CD4-206ENST00000536590 LTN1O94822 1766 aa11.03□□□□□ -0.64
CD4-206ENST00000536590 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.64
CD4-206ENST00000536590 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
CD4-206ENST00000536590 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
CD4-206ENST00000536590 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
CD4-206ENST00000536590 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms