RNA–Protein interactions for RNA: ENST00000536538.1

NCAPD2-205, Transcript of non-SMC condensin I complex subunit D2, human

TSL 3

Gene NCAPD2, Length 765 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD2-205	ENST00000536538	CSB-PGBD3	P0DP91	1061 aa		32.87	■■■□□ 2.85
NCAPD2-205	ENST00000536538	IP6K1	Q92551	441 aa		32.87	■■■□□ 2.85
NCAPD2-205	ENST00000536538	PPM1G	O15355	546 aa	Predicted RBP	32.86	■■■□□ 2.85
NCAPD2-205	ENST00000536538	CNGB1	Q14028	1251 aa	Predicted RBP	32.86	■■■□□ 2.85
NCAPD2-205	ENST00000536538	SLIT2	O94813	1529 aa		32.86	■■■□□ 2.85
NCAPD2-205	ENST00000536538	BLM	P54132	1417 aa	Predicted RBP	32.85	■■■□□ 2.85
NCAPD2-205	ENST00000536538	SMG6	Q86US8	1419 aa	Known RBP	32.85	■■■□□ 2.85
NCAPD2-205	ENST00000536538	MAP3K19	Q56UN5	1328 aa		32.85	■■■□□ 2.85
NCAPD2-205	ENST00000536538	RALBP1	Q15311	655 aa		32.85	■■■□□ 2.85
NCAPD2-205	ENST00000536538	FLT4	P35916	1363 aa		32.84	■■■□□ 2.85
NCAPD2-205	ENST00000536538	STRN4	Q9NRL3	753 aa		32.84	■■■□□ 2.85
NCAPD2-205	ENST00000536538	NWD2	Q9ULI1	1742 aa		32.83	■■■□□ 2.85
NCAPD2-205	ENST00000536538	RRS1	Q15050	365 aa	Known RBP	32.83	■■■□□ 2.85
NCAPD2-205	ENST00000536538	QTRT2	Q9H974	415 aa	Known RBP	32.83	■■■□□ 2.85
NCAPD2-205	ENST00000536538	RGS12	O14924	1447 aa		32.82	■■■□□ 2.84
NCAPD2-205	ENST00000536538	HOXC9	P31274	260 aa		32.8	■■■□□ 2.84
NCAPD2-205	ENST00000536538	VPS72	Q15906	364 aa		32.8	■■■□□ 2.84
NCAPD2-205	ENST00000536538	CFAP53	Q96M91	514 aa		32.8	■■■□□ 2.84
NCAPD2-205	ENST00000536538	TOM1L2	Q6ZVM7	507 aa		32.78	■■■□□ 2.84
NCAPD2-205	ENST00000536538	RBM6	P78332	1123 aa	Known RBP	32.77	■■■□□ 2.84
NCAPD2-205	ENST00000536538	POLK	Q9UBT6	870 aa		32.77	■■■□□ 2.84
NCAPD2-205	ENST00000536538	PLCH1	Q4KWH8	1693 aa		32.76	■■■□□ 2.84
NCAPD2-205	ENST00000536538	WDR17	Q8IZU2	1322 aa		32.76	■■■□□ 2.83
NCAPD2-205	ENST00000536538	BCL9L	Q86UU0	1499 aa		32.75	■■■□□ 2.83
NCAPD2-205	ENST00000536538	ANKRD24	Q8TF21	1146 aa		32.75	■■■□□ 2.83
NCAPD2-205	ENST00000536538	INSR	P06213	1382 aa		32.74	■■■□□ 2.83
NCAPD2-205	ENST00000536538	ANP32C	O43423	234 aa		32.74	■■■□□ 2.83
NCAPD2-205	ENST00000536538	EMILIN1	Q9Y6C2	1016 aa		32.74	■■■□□ 2.83
NCAPD2-205	ENST00000536538	LTN1	O94822	1766 aa		32.73	■■■□□ 2.83
NCAPD2-205	ENST00000536538	GJD4	Q96KN9	370 aa	Predicted RBP	32.73	■■■□□ 2.83
NCAPD2-205	ENST00000536538	THRAP3	Q9Y2W1	955 aa	Known RBP	32.73	■■■□□ 2.83
NCAPD2-205	ENST00000536538	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.73	■■■□□ 2.83
NCAPD2-205	ENST00000536538	COL5A2	P05997	1499 aa	Predicted RBP	32.72	■■■□□ 2.83
NCAPD2-205	ENST00000536538	ERBB3	P21860	1342 aa		32.72	■■■□□ 2.83
NCAPD2-205	ENST00000536538	FBLN1	P23142	703 aa		32.71	■■■□□ 2.83
NCAPD2-205	ENST00000536538	NLRP2	Q9NX02	1062 aa		32.71	■■■□□ 2.83
NCAPD2-205	ENST00000536538	AXIN2	Q9Y2T1	843 aa		32.71	■■■□□ 2.83
NCAPD2-205	ENST00000536538	CAMTA1	Q9Y6Y1	1673 aa		32.71	■■■□□ 2.83
NCAPD2-205	ENST00000536538	ATRN	O75882	1429 aa		32.7	■■■□□ 2.83
NCAPD2-205	ENST00000536538	CRB1	P82279	1406 aa		32.7	■■■□□ 2.83
NCAPD2-205	ENST00000536538	LTV1	Q96GA3	475 aa	Predicted RBP	32.7	■■■□□ 2.83
NCAPD2-205	ENST00000536538	LMO7	Q8WWI1	1683 aa		32.69	■■■□□ 2.82
NCAPD2-205	ENST00000536538	MTHFS	P49914	203 aa		32.69	■■■□□ 2.82
NCAPD2-205	ENST00000536538	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.68	■■■□□ 2.82
NCAPD2-205	ENST00000536538	PARD3	Q8TEW0	1356 aa		32.68	■■■□□ 2.82
NCAPD2-205	ENST00000536538	LARP1	Q6PKG0	1096 aa	Known RBP	32.67	■■■□□ 2.82
NCAPD2-205	ENST00000536538	TCP11L2	Q8N4U5	519 aa		32.67	■■■□□ 2.82
NCAPD2-205	ENST00000536538	CARD10	Q9BWT7	1032 aa		32.67	■■■□□ 2.82
NCAPD2-205	ENST00000536538	SPATA31A5	Q5VU36	1347 aa		32.67	■■■□□ 2.82
NCAPD2-205	ENST00000536538	SPATA31A7	Q8IWB4	1347 aa		32.67	■■■□□ 2.82
NCAPD2-205	ENST00000536538	MAP2	P11137	1827 aa	Known RBP	32.66	■■■□□ 2.82
NCAPD2-205	ENST00000536538		A0A0G2JS52	829 aa		32.66	■■■□□ 2.82
NCAPD2-205	ENST00000536538	MYT1	Q01538	1121 aa		32.66	■■■□□ 2.82
NCAPD2-205	ENST00000536538	HSP90AB2P	Q58FF8	381 aa		32.66	■■■□□ 2.82
NCAPD2-205	ENST00000536538	NUDC	Q9Y266	331 aa		32.65	■■■□□ 2.82
NCAPD2-205	ENST00000536538	PPP2R1A	P30153	589 aa		32.64	■■■□□ 2.82
NCAPD2-205	ENST00000536538	SPATA31A1	Q5TZJ5	1347 aa		32.64	■■■□□ 2.82
NCAPD2-205	ENST00000536538	USP35	Q9P2H5	1018 aa		32.64	■■■□□ 2.82
NCAPD2-205	ENST00000536538	COL18A1	P39060	1754 aa		32.63	■■■□□ 2.81
NCAPD2-205	ENST00000536538	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.63	■■■□□ 2.81
NCAPD2-205	ENST00000536538	NRAP	Q86VF7	1730 aa		32.61	■■■□□ 2.81
NCAPD2-205	ENST00000536538	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.61	■■■□□ 2.81
NCAPD2-205	ENST00000536538	DIAPH1	O60610	1272 aa	Known RBP	32.6	■■■□□ 2.81
NCAPD2-205	ENST00000536538	BARGIN	Q6ZT62	677 aa		32.6	■■■□□ 2.81
NCAPD2-205	ENST00000536538	FAM208A	Q9UK61	1670 aa	Known RBP	32.59	■■■□□ 2.81
NCAPD2-205	ENST00000536538	RAPGEF4	Q8WZA2	1011 aa		32.56	■■■□□ 2.8
NCAPD2-205	ENST00000536538	EIF4A2	Q14240	407 aa	Known RBP	32.54	■■■□□ 2.8
NCAPD2-205	ENST00000536538	FAM98C	Q17RN3	349 aa	Known RBP	32.54	■■■□□ 2.8
NCAPD2-205	ENST00000536538	IL2RB	P14784	551 aa		32.52	■■■□□ 2.8
NCAPD2-205	ENST00000536538	RGPD5	Q99666	1765 aa		32.5	■■■□□ 2.79
NCAPD2-205	ENST00000536538	ONECUT3	O60422	494 aa	Predicted RBP	32.5	■■■□□ 2.79
NCAPD2-205	ENST00000536538	PEAK1	Q9H792	1746 aa		32.5	■■■□□ 2.79
NCAPD2-205	ENST00000536538	TAT	P17735	454 aa	Predicted RBP	32.49	■■■□□ 2.79
NCAPD2-205	ENST00000536538	NEFM	P07197	916 aa		32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	PDE3B	Q13370	1112 aa		32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	NBPF6	Q5VWK0	638 aa		32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	SEPT12	Q8IYM1	358 aa		32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	NBPF4	Q96M43	638 aa		32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	PNN	Q9H307	717 aa	Known RBP	32.48	■■■□□ 2.79
NCAPD2-205	ENST00000536538	EXOC5	O00471	708 aa		32.47	■■■□□ 2.79
NCAPD2-205	ENST00000536538	U2SURP	O15042	1029 aa	Known RBP	32.47	■■■□□ 2.79
NCAPD2-205	ENST00000536538	IL13	P35225	146 aa		32.46	■■■□□ 2.79
NCAPD2-205	ENST00000536538	DDB1	Q16531	1140 aa		32.46	■■■□□ 2.79
NCAPD2-205	ENST00000536538	EYA1	Q99502	592 aa		32.46	■■■□□ 2.79
NCAPD2-205	ENST00000536538	PLEKHG2	Q9H7P9	1386 aa		32.45	■■■□□ 2.78
NCAPD2-205	ENST00000536538	DIEXF	Q68CQ4	756 aa	Known RBP	32.44	■■■□□ 2.78
NCAPD2-205	ENST00000536538	GLI3	P10071	1580 aa		32.44	■■■□□ 2.78
NCAPD2-205	ENST00000536538	IGSF1	Q8N6C5	1336 aa		32.43	■■■□□ 2.78
NCAPD2-205	ENST00000536538	EP400	Q96L91	3159 aa		32.42	■■■□□ 2.78
NCAPD2-205	ENST00000536538	WDR43	Q15061	677 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
NCAPD2-205	ENST00000536538	SPG7	Q9UQ90	795 aa		32.4	■■■□□ 2.78
NCAPD2-205	ENST00000536538	SULT6B1	Q6IMI4	303 aa		32.39	■■■□□ 2.78
NCAPD2-205	ENST00000536538	KRT27	Q7Z3Y8	459 aa		32.39	■■■□□ 2.78
NCAPD2-205	ENST00000536538	USHBP1	Q8N6Y0	703 aa		32.39	■■■□□ 2.78
NCAPD2-205	ENST00000536538	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.38	■■■□□ 2.77
NCAPD2-205	ENST00000536538	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.38	■■■□□ 2.77	7e-11	■□□□□ 10.7
NCAPD2-205	ENST00000536538	AMOT	Q4VCS5	1084 aa		32.37	■■■□□ 2.77
NCAPD2-205	ENST00000536538	ZCRB1	Q8TBF4	217 aa	Known RBP	32.36	■■■□□ 2.77
NCAPD2-205	ENST00000536538	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.36	■■■□□ 2.77	2e-6	■□□□□ 10.3
NCAPD2-205	ENST00000536538	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.35	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms