RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SPC25Q9HBM1 224 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 PCDHB15Q9Y5E8 787 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 CCDC61Q9Y6R9 512 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 MOXD2PA6NHM9 499 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 DSG3P32926 999 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 JDP2Q8WYK2 163 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 RNF34Q969K3 372 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
ECHDC1-222ENST00000531967 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 WDR78Q5VTH9 848 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 GLYCTKQ8IVS8 523 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 PLPP6Q8IY26 295 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 METTL5Q9NRN9 209 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L3A6NCW0 530 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L4A6NCW7 530 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 EXOC5O00471 708 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 ICMTO60725 284 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 USP17L1Q7RTZ2 530 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 C1orf216Q8TAB5 229 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 AKT1S1Q96B36 256 aa6.88□□□□□ -1.31
ECHDC1-222ENST00000531967 OATP04181 439 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 EVA1CP58658 441 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 XPCQ01831 940 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 CABLES1Q8TDN4 633 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 TSC1Q92574 1164 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 SCYL1Q96KG9 808 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 ANO2Q9NQ90 1003 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 CCDC189A1A4V9 331 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 GYS2P54840 703 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 PXYLP1Q8TE99 480 aa6.87□□□□□ -1.31
ECHDC1-222ENST00000531967 ENPP3O14638 875 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 NEFMP07197 916 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 P4HBP07237 508 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 XRCC5P13010 732 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 GJA5P36382 358 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 ARID5AQ03989 594 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 PIK3CDO00329 1044 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 LIG1P18858 919 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 BDNFP23560 247 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 PPP4CP60510 307 aa6.86□□□□□ -1.31
ECHDC1-222ENST00000531967 PTK7Q13308 1070 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 UPF1Q92900 1129 aaKnown RBP eCLIP6.85□□□□□ -1.311e-6■□□□□ 8
ECHDC1-222ENST00000531967 FAM161BQ96MY7 647 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 NDUFV2P19404 249 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 CTDSPL2Q05D32 466 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 MYBPC2Q14324 1141 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 ECM1Q16610 540 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 MRFAP1L1Q96HT8 127 aa6.85□□□□□ -1.31
ECHDC1-222ENST00000531967 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 ZNF76P36508 570 aa6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 AMPD3Q01432 767 aa6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 TCEAL9Q9UHQ7 104 aa6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 FBXO9Q9UK97 447 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-222ENST00000531967 C21orf2O43822 256 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 STK10O94804 968 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 PRPF38BQ5VTL8 546 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 PLEKHM2Q8IWE5 1019 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 USP17L5A8MUK1 530 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 PTMAP06454 111 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 ARHGAP4P98171 946 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 UBE4AQ14139 1066 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 SLFNL1Q499Z3 407 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 ODR4Q5SWX8 454 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 EPS8L1Q8TE68 723 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 C8orf48Q96LL4 319 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 SWAP70Q9UH65 585 aa6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 TTF2Q9UNY4 1162 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-222ENST00000531967 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 ENOX2Q16206 610 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 MAP9Q49MG5 647 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 HELBQ8NG08 1087 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 TYW1Q9NV66 732 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 INPP5FQ9Y2H2 1132 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 PRKAB1Q9Y478 270 aa6.82□□□□□ -1.32
ECHDC1-222ENST00000531967 K7ELQ4 463 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 GIGYF1O75420 1035 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 RASA1P20936 1047 aa6.81□□□□□ -1.32
ECHDC1-222ENST00000531967 EN1Q05925 392 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms