RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 ABCA5Q8WWZ7 1642 aa9.56□□□□□ -0.88
ATM-216ENST00000531525 PTPRNQ16849 979 aa9.56□□□□□ -0.88
ATM-216ENST00000531525 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
ATM-216ENST00000531525 GAPVD1Q14C86 1478 aa9.55□□□□□ -0.88
ATM-216ENST00000531525 BRD1O95696 1058 aa9.55□□□□□ -0.88
ATM-216ENST00000531525 CALR3Q96L12 384 aaKnown RBP9.55□□□□□ -0.88
ATM-216ENST00000531525 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
ATM-216ENST00000531525 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
ATM-216ENST00000531525 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
ATM-216ENST00000531525 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
ATM-216ENST00000531525 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
ATM-216ENST00000531525 PER1O15534 1290 aaPredicted RBP9.53□□□□□ -0.88
ATM-216ENST00000531525 CCNYL3P0C7X3 344 aa9.52□□□□□ -0.88
ATM-216ENST00000531525 RPIAP49247 311 aa9.52□□□□□ -0.88
ATM-216ENST00000531525 PTCRAQ6ISU1 281 aaPredicted RBP9.52□□□□□ -0.88
ATM-216ENST00000531525 TSC1Q92574 1164 aa9.52□□□□□ -0.88
ATM-216ENST00000531525 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.88
ATM-216ENST00000531525 SNRKQ9NRH2 765 aa9.51□□□□□ -0.89
ATM-216ENST00000531525 ERCC6L2Q5T890 1561 aa9.51□□□□□ -0.89
ATM-216ENST00000531525 KIF13AQ9H1H9 1805 aa9.51□□□□□ -0.89
ATM-216ENST00000531525 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
ATM-216ENST00000531525 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
ATM-216ENST00000531525 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
ATM-216ENST00000531525 RFC5P40937 340 aa9.5□□□□□ -0.89
ATM-216ENST00000531525 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
ATM-216ENST00000531525 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
ATM-216ENST00000531525 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
ATM-216ENST00000531525 ABCA10Q8WWZ4 1543 aa9.49□□□□□ -0.89
ATM-216ENST00000531525 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
ATM-216ENST00000531525 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
ATM-216ENST00000531525 KCNH2Q12809 1159 aa9.49□□□□□ -0.89
ATM-216ENST00000531525 CEP170Q5SW79 1584 aa9.48□□□□□ -0.89
ATM-216ENST00000531525 CARNS1A5YM72 827 aa9.48□□□□□ -0.89
ATM-216ENST00000531525 CSB-PGBD3P0DP91 1061 aa9.48□□□□□ -0.89
ATM-216ENST00000531525 TRIM32Q13049 653 aa9.48□□□□□ -0.89
ATM-216ENST00000531525 ZNF697Q5TEC3 545 aa9.48□□□□□ -0.89
ATM-216ENST00000531525 GRIN2AQ12879 1464 aa9.47□□□□□ -0.89
ATM-216ENST00000531525 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
ATM-216ENST00000531525 RFX1P22670 979 aa9.47□□□□□ -0.89
ATM-216ENST00000531525 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
ATM-216ENST00000531525 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
ATM-216ENST00000531525 UNCXA6NJT0 531 aa9.46□□□□□ -0.89
ATM-216ENST00000531525 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.89
ATM-216ENST00000531525 GLMNQ92990 594 aa9.46□□□□□ -0.89
ATM-216ENST00000531525 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.89
ATM-216ENST00000531525 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.89
ATM-216ENST00000531525 NUP160Q12769 1436 aa9.46□□□□□ -0.9
ATM-216ENST00000531525 AP1G2O75843 785 aa9.45□□□□□ -0.9
ATM-216ENST00000531525 CTHP32929 405 aa9.45□□□□□ -0.9
ATM-216ENST00000531525 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
ATM-216ENST00000531525 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
ATM-216ENST00000531525 GDF9O60383 454 aa9.44□□□□□ -0.9
ATM-216ENST00000531525 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
ATM-216ENST00000531525 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
ATM-216ENST00000531525 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
ATM-216ENST00000531525 POM121CA8CG34 1229 aa9.43□□□□□ -0.9
ATM-216ENST00000531525 ABL2P42684 1182 aa9.43□□□□□ -0.9
ATM-216ENST00000531525 SKOR1P84550 965 aa9.43□□□□□ -0.9
ATM-216ENST00000531525 POLR3GLQ9BT43 218 aa9.43□□□□□ -0.9
ATM-216ENST00000531525 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
ATM-216ENST00000531525 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
ATM-216ENST00000531525 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
ATM-216ENST00000531525 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
ATM-216ENST00000531525 WNT7BP56706 349 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 SH3BP2P78314 561 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PRR20EP86478 221 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PRR20CP86479 221 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PRR20DP86480 221 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PRR20BP86481 221 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 PRR20AP86496 221 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 BAP1Q92560 729 aa9.41□□□□□ -0.9
ATM-216ENST00000531525 HMX1Q9NP08 348 aaPredicted RBP9.41□□□□□ -0.9
ATM-216ENST00000531525 TNFRSF10AO00220 468 aa9.4□□□□□ -0.91
ATM-216ENST00000531525 FOXC1Q12948 553 aa9.4□□□□□ -0.91
ATM-216ENST00000531525 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.91
ATM-216ENST00000531525 WNT7AO00755 349 aa9.39□□□□□ -0.91
ATM-216ENST00000531525 GFRA3O60609 400 aa9.39□□□□□ -0.91
ATM-216ENST00000531525 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
ATM-216ENST00000531525 ERICH3Q5RHP9 1530 aa9.39□□□□□ -0.91
ATM-216ENST00000531525 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
ATM-216ENST00000531525 FHAD1B1AJZ9 1412 aa9.38□□□□□ -0.91
ATM-216ENST00000531525 WRNQ14191 1432 aaPredicted RBP eCLIP9.38□□□□□ -0.91
ATM-216ENST00000531525 NR6A1Q15406 480 aa9.38□□□□□ -0.91
ATM-216ENST00000531525 RUSC2Q8N2Y8 1516 aa9.38□□□□□ -0.91
ATM-216ENST00000531525 ZNF511Q8NB15 262 aa9.38□□□□□ -0.91
ATM-216ENST00000531525 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
ATM-216ENST00000531525 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
ATM-216ENST00000531525 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
ATM-216ENST00000531525 MAPKBP1O60336 1514 aa9.37□□□□□ -0.91
ATM-216ENST00000531525 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
ATM-216ENST00000531525 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
ATM-216ENST00000531525 ADCY10Q96PN6 1610 aa9.35□□□□□ -0.91
ATM-216ENST00000531525 LAPTM4AQ15012 233 aa9.35□□□□□ -0.91
ATM-216ENST00000531525 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
ATM-216ENST00000531525 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
ATM-216ENST00000531525 TOR4AQ9NXH8 423 aa9.35□□□□□ -0.91
ATM-216ENST00000531525 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms