RNA–Protein interactions for RNA: ENST00000523310.1

CCNC-212, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-212ENST00000523310 FKBPLQ9UIM3 349 aa11.67□□□□□ -0.54
CCNC-212ENST00000523310 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
CCNC-212ENST00000523310 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
CCNC-212ENST00000523310 ZC3H4Q9UPT8 1303 aaKnown RBP11.65□□□□□ -0.54
CCNC-212ENST00000523310 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
CCNC-212ENST00000523310 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
CCNC-212ENST00000523310 PPP1R26Q5T8A7 1209 aaPredicted RBP11.63□□□□□ -0.55
CCNC-212ENST00000523310 Q6ZVU0 165 aa11.63□□□□□ -0.55
CCNC-212ENST00000523310 KDM4CQ9H3R0 1056 aa11.63□□□□□ -0.55
CCNC-212ENST00000523310 CDV3Q9UKY7 258 aaKnown RBP11.63□□□□□ -0.55
CCNC-212ENST00000523310 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
CCNC-212ENST00000523310 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
CCNC-212ENST00000523310 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
CCNC-212ENST00000523310 NR6A1Q15406 480 aa11.61□□□□□ -0.55
CCNC-212ENST00000523310 SLC10A4Q96EP9 437 aa11.61□□□□□ -0.55
CCNC-212ENST00000523310 OCSTAMPQ9BR26 566 aa11.61□□□□□ -0.55
CCNC-212ENST00000523310 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
CCNC-212ENST00000523310 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
CCNC-212ENST00000523310 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
CCNC-212ENST00000523310 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
CCNC-212ENST00000523310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.59□□□□□ -0.55
CCNC-212ENST00000523310 GPSM3Q9Y4H4 160 aa11.59□□□□□ -0.55
CCNC-212ENST00000523310 SPINT1O43278 529 aa11.58□□□□□ -0.56
CCNC-212ENST00000523310 CBLBQ13191 982 aa11.58□□□□□ -0.56
CCNC-212ENST00000523310 DHX9Q08211 1270 aaKnown RBP11.57□□□□□ -0.56
CCNC-212ENST00000523310 ZBTB33Q86T24 672 aa11.57□□□□□ -0.56
CCNC-212ENST00000523310 PTK2Q05397 1052 aa11.56□□□□□ -0.56
CCNC-212ENST00000523310 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
CCNC-212ENST00000523310 AP1G2O75843 785 aa11.54□□□□□ -0.56
CCNC-212ENST00000523310 PTSQ03393 145 aa11.54□□□□□ -0.56
CCNC-212ENST00000523310 ADAM32Q8TC27 787 aa11.54□□□□□ -0.56
CCNC-212ENST00000523310 EPS8L1Q8TE68 723 aa11.53□□□□□ -0.56
CCNC-212ENST00000523310 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
CCNC-212ENST00000523310 NANOS1Q8WY41 292 aaKnown RBP11.51□□□□□ -0.57
CCNC-212ENST00000523310 FIGNL2A6NMB9 653 aa11.5□□□□□ -0.57
CCNC-212ENST00000523310 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
CCNC-212ENST00000523310 KRT76Q01546 638 aa11.5□□□□□ -0.57
CCNC-212ENST00000523310 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
CCNC-212ENST00000523310 GPR161Q8N6U8 529 aaKnown RBP11.5□□□□□ -0.57
CCNC-212ENST00000523310 SLC35F4A4IF30 521 aa11.48□□□□□ -0.57
CCNC-212ENST00000523310 CCDC155Q8N6L0 562 aa11.48□□□□□ -0.57
CCNC-212ENST00000523310 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
CCNC-212ENST00000523310 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
CCNC-212ENST00000523310 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
CCNC-212ENST00000523310 RFC5P40937 340 aa11.47□□□□□ -0.57
CCNC-212ENST00000523310 CTSOP43234 321 aaPredicted RBP11.47□□□□□ -0.57
CCNC-212ENST00000523310 RELBQ01201 579 aa11.46□□□□□ -0.57
CCNC-212ENST00000523310 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
CCNC-212ENST00000523310 ESPNB1AK53 854 aa11.45□□□□□ -0.58
CCNC-212ENST00000523310 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
CCNC-212ENST00000523310 INSM2Q96T92 566 aaPredicted RBP11.45□□□□□ -0.58
CCNC-212ENST00000523310 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
CCNC-212ENST00000523310 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
CCNC-212ENST00000523310 LILRA1O75019 489 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 ADH1AP07327 375 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 BCANQ96GW7 911 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 CNTNAP3BQ96NU0 1288 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 CNTNAP3Q9BZ76 1288 aa11.43□□□□□ -0.58
CCNC-212ENST00000523310 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
CCNC-212ENST00000523310 ITGA6P23229 1130 aa11.42□□□□□ -0.58
CCNC-212ENST00000523310 DZIP3Q86Y13 1208 aaKnown RBP11.42□□□□□ -0.58
CCNC-212ENST00000523310 KDF1Q8NAX2 398 aaPredicted RBP11.42□□□□□ -0.58
CCNC-212ENST00000523310 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
CCNC-212ENST00000523310 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
CCNC-212ENST00000523310 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
CCNC-212ENST00000523310 POLMQ9NP87 494 aaPredicted RBP11.41□□□□□ -0.58
CCNC-212ENST00000523310 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
CCNC-212ENST00000523310 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
CCNC-212ENST00000523310 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
CCNC-212ENST00000523310 GSK3AP49840 483 aa11.39□□□□□ -0.59
CCNC-212ENST00000523310 RAB15P59190 212 aa11.39□□□□□ -0.59
CCNC-212ENST00000523310 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
CCNC-212ENST00000523310 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
CCNC-212ENST00000523310 PTGIRP43119 386 aa11.38□□□□□ -0.59
CCNC-212ENST00000523310 TMEM259Q4ZIN3 620 aa11.37□□□□□ -0.59
CCNC-212ENST00000523310 SV2AQ7L0J3 742 aa11.36□□□□□ -0.59
CCNC-212ENST00000523310 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
CCNC-212ENST00000523310 SLURP2P0DP57 97 aa11.35□□□□□ -0.59
CCNC-212ENST00000523310 ZNF385CQ66K41 422 aaPredicted RBP11.35□□□□□ -0.59
CCNC-212ENST00000523310 PCMTD1Q96MG8 357 aaPredicted RBP11.35□□□□□ -0.59
CCNC-212ENST00000523310 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
CCNC-212ENST00000523310 CDC14CA4D256 554 aa11.33□□□□□ -0.6
CCNC-212ENST00000523310 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
CCNC-212ENST00000523310 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
CCNC-212ENST00000523310 LYSMD3Q7Z3D4 306 aa11.32□□□□□ -0.6
CCNC-212ENST00000523310 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
CCNC-212ENST00000523310 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
CCNC-212ENST00000523310 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
CCNC-212ENST00000523310 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
CCNC-212ENST00000523310 FBXO45P0C2W1 286 aa11.3□□□□□ -0.6
CCNC-212ENST00000523310 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
CCNC-212ENST00000523310 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
CCNC-212ENST00000523310 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
CCNC-212ENST00000523310 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
CCNC-212ENST00000523310 RNF225M0QZC1 329 aaPredicted RBP11.28□□□□□ -0.6
CCNC-212ENST00000523310 ARHGEF15O94989 841 aa11.28□□□□□ -0.6
CCNC-212ENST00000523310 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
CCNC-212ENST00000523310 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
CCNC-212ENST00000523310 GPC1P35052 558 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms