RNA–Protein interactions for RNA: ENST00000523310.1

CCNC-212, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-212ENST00000523310 AEBP2Q6ZN18 517 aaPredicted RBP34.16■■■■□ 3.06
CCNC-212ENST00000523310 CHIC1Q5VXU3 224 aa32.52■■■□□ 2.8
CCNC-212ENST00000523310 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
CCNC-212ENST00000523310 PHF23Q9BUL5 403 aaPredicted RBP28.73■■■□□ 2.19
CCNC-212ENST00000523310 FOXD1Q16676 465 aa27.12■■□□□ 1.93
CCNC-212ENST00000523310 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
CCNC-212ENST00000523310 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
CCNC-212ENST00000523310 MSH5O43196 834 aa25.35■■□□□ 1.65
CCNC-212ENST00000523310 PIAS4Q8N2W9 510 aaPredicted RBP25.33■■□□□ 1.65
CCNC-212ENST00000523310 ADRA2BP18089 450 aa25.31■■□□□ 1.64
CCNC-212ENST00000523310 POTEDQ86YR6 584 aa24.6■■□□□ 1.53
CCNC-212ENST00000523310 MAPK8IP2Q13387 824 aaPredicted RBP23.23■■□□□ 1.31
CCNC-212ENST00000523310 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
CCNC-212ENST00000523310 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
CCNC-212ENST00000523310 PPP4R3CPQ6ZMV5 832 aa22.8■■□□□ 1.24
CCNC-212ENST00000523310 CNKSR2Q8WXI2 1034 aa22.36■■□□□ 1.17
CCNC-212ENST00000523310 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
CCNC-212ENST00000523310 RNF216Q9NWF9 866 aaPredicted RBP22.16■■□□□ 1.14
CCNC-212ENST00000523310 DCAF8L1A6NGE4 600 aa22.05■■□□□ 1.12
CCNC-212ENST00000523310 NCBP3Q53F19 620 aaKnown RBP21.93■■□□□ 1.1
CCNC-212ENST00000523310 CACNB1Q02641 598 aaPredicted RBP21.66■■□□□ 1.06
CCNC-212ENST00000523310 RNF39Q9H2S5 420 aa21.66■■□□□ 1.06
CCNC-212ENST00000523310 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.05
CCNC-212ENST00000523310 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
CCNC-212ENST00000523310 C1QBPQ07021 282 aaKnown RBP21.33■■□□□ 1.01
CCNC-212ENST00000523310 KCNA4P22459 653 aa21.28■■□□□ 1
CCNC-212ENST00000523310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCNC-212ENST00000523310 U3KPZ7 1027 aaPredicted RBP20.8■□□□□ 0.92
CCNC-212ENST00000523310 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
CCNC-212ENST00000523310 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
CCNC-212ENST00000523310 CAPN15O75808 1086 aa20.37■□□□□ 0.85
CCNC-212ENST00000523310 DSG3P32926 999 aa20.3■□□□□ 0.84
CCNC-212ENST00000523310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
CCNC-212ENST00000523310 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
CCNC-212ENST00000523310 APLP2Q06481 763 aa20.2■□□□□ 0.82
CCNC-212ENST00000523310 SAMD1Q6SPF0 538 aaPredicted RBP20.11■□□□□ 0.81
CCNC-212ENST00000523310 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
CCNC-212ENST00000523310 ZNF219Q9P2Y4 722 aaPredicted RBP20.08■□□□□ 0.81
CCNC-212ENST00000523310 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
CCNC-212ENST00000523310 MYCNP04198 464 aaPredicted RBP20.01■□□□□ 0.79
CCNC-212ENST00000523310 ABCB7O75027 752 aa19.91■□□□□ 0.78
CCNC-212ENST00000523310 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
CCNC-212ENST00000523310 ZBTB22O15209 634 aa19.59■□□□□ 0.73
CCNC-212ENST00000523310 POLA2Q14181 598 aa19.56■□□□□ 0.72
CCNC-212ENST00000523310 ATF5Q9Y2D1 282 aaPredicted RBP19.54■□□□□ 0.72
CCNC-212ENST00000523310 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
CCNC-212ENST00000523310 POTEHQ6S545 545 aa19.28■□□□□ 0.68
CCNC-212ENST00000523310 ATXN8OSP0DMR3 200 aa19.26■□□□□ 0.67
CCNC-212ENST00000523310 ZBTB12Q9Y330 459 aaPredicted RBP19.2■□□□□ 0.66
CCNC-212ENST00000523310 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
CCNC-212ENST00000523310 AKT1S1Q96B36 256 aa18.93■□□□□ 0.62
CCNC-212ENST00000523310 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
CCNC-212ENST00000523310 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
CCNC-212ENST00000523310 FBLN2P98095 1184 aa18.74■□□□□ 0.59
CCNC-212ENST00000523310 REM2Q8IYK8 340 aaPredicted RBP18.74■□□□□ 0.59
CCNC-212ENST00000523310 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
CCNC-212ENST00000523310 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
CCNC-212ENST00000523310 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
CCNC-212ENST00000523310 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
CCNC-212ENST00000523310 PITPNM1O00562 1244 aa18.55■□□□□ 0.56
CCNC-212ENST00000523310 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
CCNC-212ENST00000523310 PIP4P2Q8N4L2 257 aa18.47■□□□□ 0.55
CCNC-212ENST00000523310 SSUH2Q9Y2M2 353 aa18.41■□□□□ 0.54
CCNC-212ENST00000523310 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCNC-212ENST00000523310 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
CCNC-212ENST00000523310 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
CCNC-212ENST00000523310 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
CCNC-212ENST00000523310 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
CCNC-212ENST00000523310 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCNC-212ENST00000523310 HAX1O00165 279 aa18.05■□□□□ 0.48
CCNC-212ENST00000523310 PRKAR2AP13861 404 aaKnown RBP18.05■□□□□ 0.48
CCNC-212ENST00000523310 PRR29P0C7W0 189 aa17.91■□□□□ 0.46
CCNC-212ENST00000523310 EVX2Q03828 476 aa17.88■□□□□ 0.45
CCNC-212ENST00000523310 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
CCNC-212ENST00000523310 C19orf67A6NJJ6 358 aa17.8■□□□□ 0.44
CCNC-212ENST00000523310 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
CCNC-212ENST00000523310 STAG3Q9UJ98 1225 aa17.65■□□□□ 0.42
CCNC-212ENST00000523310 FARP1Q9Y4F1 1045 aaPredicted RBP17.62■□□□□ 0.41
CCNC-212ENST00000523310 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
CCNC-212ENST00000523310 GABBR2O75899 941 aa17.49■□□□□ 0.39
CCNC-212ENST00000523310 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
CCNC-212ENST00000523310 PROM2Q8N271 834 aa17.46■□□□□ 0.39
CCNC-212ENST00000523310 CLCN6P51797 869 aa17.28■□□□□ 0.36
CCNC-212ENST00000523310 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
CCNC-212ENST00000523310 ZNF579Q8NAF0 562 aaKnown RBP17.25■□□□□ 0.35
CCNC-212ENST00000523310 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
CCNC-212ENST00000523310 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCNC-212ENST00000523310 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
CCNC-212ENST00000523310 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
CCNC-212ENST00000523310 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
CCNC-212ENST00000523310 PHF12Q96QT6 1004 aa17.01■□□□□ 0.31
CCNC-212ENST00000523310 DCBLD2Q96PD2 775 aa16.99■□□□□ 0.31
CCNC-212ENST00000523310 LHX8Q68G74 356 aa16.98■□□□□ 0.31
CCNC-212ENST00000523310 FKBP8Q14318 412 aa16.96■□□□□ 0.31
CCNC-212ENST00000523310 MIER1Q8N108 512 aa16.92■□□□□ 0.3
CCNC-212ENST00000523310 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
CCNC-212ENST00000523310 TSPYL2Q9H2G4 693 aaPredicted RBP16.84■□□□□ 0.29
CCNC-212ENST00000523310 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
CCNC-212ENST00000523310 MS4A3Q96HJ5 214 aa16.8■□□□□ 0.28
CCNC-212ENST00000523310 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms