RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
MSR1-208ENST00000518343 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
MSR1-208ENST00000518343 ADGRB1O14514 1584 aa8.29□□□□□ -1.08
MSR1-208ENST00000518343 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
MSR1-208ENST00000518343 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
MSR1-208ENST00000518343 FAM182BQ5T319 152 aa8.28□□□□□ -1.08
MSR1-208ENST00000518343 BCL11BQ9C0K0 894 aaPredicted RBP8.28□□□□□ -1.08
MSR1-208ENST00000518343 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
MSR1-208ENST00000518343 CRB1P82279 1406 aa8.28□□□□□ -1.08
MSR1-208ENST00000518343 MINK1Q8N4C8 1332 aaPredicted RBP8.28□□□□□ -1.08
MSR1-208ENST00000518343 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
MSR1-208ENST00000518343 CHADLQ6NUI6 762 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
MSR1-208ENST00000518343 CHD4Q14839 1912 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 USP19O94966 1318 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
MSR1-208ENST00000518343 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
MSR1-208ENST00000518343 GABBR2O75899 941 aa8.26□□□□□ -1.09
MSR1-208ENST00000518343 ZC3H6P61129 1189 aaKnown RBP8.26□□□□□ -1.09
MSR1-208ENST00000518343 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
MSR1-208ENST00000518343 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
MSR1-208ENST00000518343 LMO7Q8WWI1 1683 aa8.25□□□□□ -1.09
MSR1-208ENST00000518343 CHRNA2Q15822 529 aa8.25□□□□□ -1.09
MSR1-208ENST00000518343 DDB1Q16531 1140 aa8.25□□□□□ -1.09
MSR1-208ENST00000518343 ZNF692Q9BU19 519 aaPredicted RBP8.25□□□□□ -1.09
MSR1-208ENST00000518343 NRKQ7Z2Y5 1582 aa8.25□□□□□ -1.09
MSR1-208ENST00000518343 COL5A2P05997 1499 aaPredicted RBP8.25□□□□□ -1.09
MSR1-208ENST00000518343 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 GCP02774 474 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 LARP1Q6PKG0 1096 aaKnown RBP8.24□□□□□ -1.09
MSR1-208ENST00000518343 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
MSR1-208ENST00000518343 MTFR1LQ9H019 292 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 STK32BQ9NY57 414 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 ACEP12821 1306 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
MSR1-208ENST00000518343 CASZ1Q86V15 1759 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 DCAF11Q8TEB1 546 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 CDK19Q9BWU1 502 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 ARHGEF28Q8N1W1 1705 aaKnown RBP8.23□□□□□ -1.09
MSR1-208ENST00000518343 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 KIAA1210Q9ULL0 1709 aa8.23□□□□□ -1.09
MSR1-208ENST00000518343 SBF2Q86WG5 1849 aa8.22□□□□□ -1.09
MSR1-208ENST00000518343 C1QTNF8P60827 252 aa8.22□□□□□ -1.09
MSR1-208ENST00000518343 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
MSR1-208ENST00000518343 ABCC6O95255 1503 aa8.22□□□□□ -1.09
MSR1-208ENST00000518343 AKAP12Q02952 1782 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 SENP3-EIF4A1A0A087X0R7 540 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 SLC15A2Q16348 729 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 TOM1L2Q6ZVM7 507 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 SYT17Q9BSW7 474 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 WDR17Q8IZU2 1322 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 CCDC7Q96M83 1385 aa8.21□□□□□ -1.1
MSR1-208ENST00000518343 EXOC5O00471 708 aa8.2□□□□□ -1.1
MSR1-208ENST00000518343 PTGER2P43116 358 aa8.2□□□□□ -1.1
MSR1-208ENST00000518343 CARD10Q9BWT7 1032 aa8.2□□□□□ -1.1
MSR1-208ENST00000518343 LRRC37A3O60309 1634 aa8.2□□□□□ -1.1
MSR1-208ENST00000518343 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
MSR1-208ENST00000518343 NLRP6P59044 892 aa8.19□□□□□ -1.1
MSR1-208ENST00000518343 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
MSR1-208ENST00000518343 NUTM2GQ5VZR2 741 aa8.19□□□□□ -1.1
MSR1-208ENST00000518343 FHDC1Q9C0D6 1143 aaPredicted RBP8.19□□□□□ -1.1
MSR1-208ENST00000518343 KDM2AQ9Y2K7 1162 aa8.19□□□□□ -1.1
MSR1-208ENST00000518343 PPIP5K1Q6PFW1 1433 aa8.19□□□□□ -1.1
MSR1-208ENST00000518343 SLIT3O75094 1523 aa8.19□□□□□ -1.1
MSR1-208ENST00000518343 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 POLD1P28340 1107 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 TXNRD1Q16881 649 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 LHX8Q68G74 356 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 ARXQ96QS3 562 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 TTC21AQ8NDW8 1320 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 USP6P35125 1406 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 MYOM1P52179 1685 aa8.18□□□□□ -1.1
MSR1-208ENST00000518343 UTRNP46939 3433 aa8.17□□□□□ -1.1
MSR1-208ENST00000518343 GRIN3BO60391 1043 aa8.17□□□□□ -1.1
MSR1-208ENST00000518343 ZBTB7AO95365 584 aa8.17□□□□□ -1.1
MSR1-208ENST00000518343 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
MSR1-208ENST00000518343 ANO8Q9HCE9 1232 aaPredicted RBP8.17□□□□□ -1.1
MSR1-208ENST00000518343 CENPJQ9HC77 1338 aaPredicted RBP8.17□□□□□ -1.1
MSR1-208ENST00000518343 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
MSR1-208ENST00000518343 QRICH2Q9H0J4 1663 aa8.17□□□□□ -1.1
MSR1-208ENST00000518343 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 CSB-PGBD3P0DP91 1061 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 GPR162Q16538 588 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 TNS2Q63HR2 1409 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 EVC2Q86UK5 1308 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 SGIP1Q9BQI5 828 aa8.16□□□□□ -1.1
MSR1-208ENST00000518343 TRPM1Q7Z4N2 1603 aa8.15□□□□□ -1.1
MSR1-208ENST00000518343 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
MSR1-208ENST00000518343 ARHGEF25Q86VW2 580 aa8.15□□□□□ -1.1
MSR1-208ENST00000518343 PROM2Q8N271 834 aa8.15□□□□□ -1.1
MSR1-208ENST00000518343 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
MSR1-208ENST00000518343 QSER1Q2KHR3 1735 aa8.15□□□□□ -1.11
MSR1-208ENST00000518343 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
MSR1-208ENST00000518343 COL18A1P39060 1754 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms