RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
SCARNA20-201ENST00000516768 GLI3P10071 1580 aa15.36■□□□□ 0.05
SCARNA20-201ENST00000516768 NSD3Q9BZ95 1437 aa15.36■□□□□ 0.05
SCARNA20-201ENST00000516768 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
SCARNA20-201ENST00000516768 IP6K1Q92551 441 aa15.36■□□□□ 0.05
SCARNA20-201ENST00000516768 NFAT5O94916 1531 aa15.36■□□□□ 0.05
SCARNA20-201ENST00000516768 LMO7Q8WWI1 1683 aa15.35■□□□□ 0.05
SCARNA20-201ENST00000516768 UPF1Q92900 1129 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCARNA20-201ENST00000516768 MYOM1P52179 1685 aa15.35■□□□□ 0.05
SCARNA20-201ENST00000516768 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
SCARNA20-201ENST00000516768 NRAPQ86VF7 1730 aa15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 COL5A2P05997 1499 aaPredicted RBP15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 COL18A1P39060 1754 aa15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 TOM1L2Q6ZVM7 507 aa15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 MAP3K19Q56UN5 1328 aa15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
SCARNA20-201ENST00000516768 PER1O15534 1290 aaPredicted RBP15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 KRT27Q7Z3Y8 459 aa15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 KNSTRNQ9Y448 316 aa15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 WASHC2AQ641Q2 1341 aa15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 CRB1P82279 1406 aa15.33■□□□□ 0.04
SCARNA20-201ENST00000516768 A0A0G2JS52 829 aa15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 HOXC9P31274 260 aa15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 AMPHP49418 695 aa15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 MYT1Q01538 1121 aa15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 RRS1Q15050 365 aaKnown RBP15.32■□□□□ 0.04
SCARNA20-201ENST00000516768 ANKRD24Q8TF21 1146 aa15.31■□□□□ 0.04
SCARNA20-201ENST00000516768 CCDC7Q96M83 1385 aa15.31■□□□□ 0.04
SCARNA20-201ENST00000516768 ERBB3P21860 1342 aa15.3■□□□□ 0.04
SCARNA20-201ENST00000516768 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
SCARNA20-201ENST00000516768 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
SCARNA20-201ENST00000516768 ABCC6O95255 1503 aa15.28■□□□□ 0.04
SCARNA20-201ENST00000516768 BLMP54132 1417 aaPredicted RBP15.28■□□□□ 0.04
SCARNA20-201ENST00000516768 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
SCARNA20-201ENST00000516768 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
SCARNA20-201ENST00000516768 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
SCARNA20-201ENST00000516768 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.04
SCARNA20-201ENST00000516768 POLKQ9UBT6 870 aa15.27■□□□□ 0.04
SCARNA20-201ENST00000516768 KIF24Q5T7B8 1368 aa15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 RGPD5Q99666 1765 aa15.26■□□□□ 0.03
SCARNA20-201ENST00000516768 NSD2O96028 1365 aa15.25■□□□□ 0.03
SCARNA20-201ENST00000516768 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
SCARNA20-201ENST00000516768 FAM182BQ5T319 152 aa15.25■□□□□ 0.03
SCARNA20-201ENST00000516768 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
SCARNA20-201ENST00000516768 EXOC5O00471 708 aa15.24■□□□□ 0.03
SCARNA20-201ENST00000516768 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
SCARNA20-201ENST00000516768 LTN1O94822 1766 aa15.24■□□□□ 0.03
SCARNA20-201ENST00000516768 INSRP06213 1382 aa15.24■□□□□ 0.03
SCARNA20-201ENST00000516768 BRWD3Q6RI45 1802 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 DDB1Q16531 1140 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 NBPF6Q5VWK0 638 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 NBPF4Q96M43 638 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 FLT4P35916 1363 aa15.23■□□□□ 0.03
SCARNA20-201ENST00000516768 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
SCARNA20-201ENST00000516768 KIF20BQ96Q89 1820 aa15.22■□□□□ 0.03
SCARNA20-201ENST00000516768 IL2RBP14784 551 aa15.22■□□□□ 0.03
SCARNA20-201ENST00000516768 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
SCARNA20-201ENST00000516768 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
SCARNA20-201ENST00000516768 DISP2A7MBM2 1401 aa15.19■□□□□ 0.02
SCARNA20-201ENST00000516768 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20-201ENST00000516768 EP400Q96L91 3159 aa15.19■□□□□ 0.02
SCARNA20-201ENST00000516768 MAP2P11137 1827 aaKnown RBP15.17■□□□□ 0.02
SCARNA20-201ENST00000516768 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
SCARNA20-201ENST00000516768 TRIM37O94972 964 aa15.16■□□□□ 0.02
SCARNA20-201ENST00000516768 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
SCARNA20-201ENST00000516768 EYA1Q99502 592 aa15.16■□□□□ 0.02
SCARNA20-201ENST00000516768 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
SCARNA20-201ENST00000516768 PEAK1Q9H792 1746 aa15.15■□□□□ 0.02
SCARNA20-201ENST00000516768 MTHFSP49914 203 aa15.15■□□□□ 0.02
SCARNA20-201ENST00000516768 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
SCARNA20-201ENST00000516768 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
SCARNA20-201ENST00000516768 DEFB132Q7Z7B7 95 aa15.14■□□□□ 0.01
SCARNA20-201ENST00000516768 ZCRB1Q8TBF4 217 aaKnown RBP15.14■□□□□ 0.01
SCARNA20-201ENST00000516768 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
SCARNA20-201ENST00000516768 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
SCARNA20-201ENST00000516768 ANKRD26Q9UPS8 1709 aa15.13■□□□□ 0.01
SCARNA20-201ENST00000516768 BCL9O00512 1426 aa15.12■□□□□ 0.01
SCARNA20-201ENST00000516768 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
SCARNA20-201ENST00000516768 BAG6P46379 1132 aa15.12■□□□□ 0.01
SCARNA20-201ENST00000516768 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
SCARNA20-201ENST00000516768 OVOS2A0A0G2JMS6 1433 aa15.11■□□□□ 0.01
SCARNA20-201ENST00000516768 APBA3O96018 575 aa15.11■□□□□ 0.01
SCARNA20-201ENST00000516768 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
SCARNA20-201ENST00000516768 BCL11BQ9C0K0 894 aaPredicted RBP15.11■□□□□ 0.01
SCARNA20-201ENST00000516768 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
SCARNA20-201ENST00000516768 IL13P35225 146 aa15.1■□□□□ 0.01
SCARNA20-201ENST00000516768 EN1Q05925 392 aaPredicted RBP15.1■□□□□ 0.01
SCARNA20-201ENST00000516768 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
SCARNA20-201ENST00000516768 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
SCARNA20-201ENST00000516768 CAMKK2Q96RR4 588 aa15.09■□□□□ 0.01
SCARNA20-201ENST00000516768 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
SCARNA20-201ENST00000516768 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
SCARNA20-201ENST00000516768 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms