RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 NUTM2DQ5VT03 806 aaPredicted RBP10.2□□□□□ -0.78
LINC00616-204ENST00000513895 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
LINC00616-204ENST00000513895 C1QTNF2Q9BXJ5 285 aa10.2□□□□□ -0.78
LINC00616-204ENST00000513895 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
LINC00616-204ENST00000513895 SH3RF1Q7Z6J0 888 aa10.19□□□□□ -0.78
LINC00616-204ENST00000513895 ARMC2Q8NEN0 867 aa10.19□□□□□ -0.78
LINC00616-204ENST00000513895 NESP48681 1621 aa10.18□□□□□ -0.78
LINC00616-204ENST00000513895 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
LINC00616-204ENST00000513895 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
LINC00616-204ENST00000513895 C6orf118Q5T5N4 469 aa10.17□□□□□ -0.78
LINC00616-204ENST00000513895 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
LINC00616-204ENST00000513895 FSHRP23945 695 aa10.16□□□□□ -0.78
LINC00616-204ENST00000513895 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
LINC00616-204ENST00000513895 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
LINC00616-204ENST00000513895 MEIOBQ8N635 442 aa10.16□□□□□ -0.78
LINC00616-204ENST00000513895 MAP4K5Q9Y4K4 846 aa10.16□□□□□ -0.78
LINC00616-204ENST00000513895 MAN1A2O60476 641 aa10.15□□□□□ -0.78
LINC00616-204ENST00000513895 SH3BP5LQ7L8J4 393 aa10.15□□□□□ -0.78
LINC00616-204ENST00000513895 TRMT44Q8IYL2 757 aaKnown RBP10.15□□□□□ -0.78
LINC00616-204ENST00000513895 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
LINC00616-204ENST00000513895 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
LINC00616-204ENST00000513895 UPP2O95045 317 aa10.13□□□□□ -0.79
LINC00616-204ENST00000513895 BMP2P12643 396 aa10.13□□□□□ -0.79
LINC00616-204ENST00000513895 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
LINC00616-204ENST00000513895 MAGEB6P1A0A0J9YX57 407 aa10.12□□□□□ -0.79
LINC00616-204ENST00000513895 VASH1Q7L8A9 365 aaPredicted RBP10.12□□□□□ -0.79
LINC00616-204ENST00000513895 TMEM132AQ24JP5 1023 aa10.11□□□□□ -0.79
LINC00616-204ENST00000513895 HOMEZQ8IX15 550 aa10.11□□□□□ -0.79
LINC00616-204ENST00000513895 GPKOWQ92917 476 aaPredicted RBP eCLIP10.11□□□□□ -0.79
LINC00616-204ENST00000513895 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
LINC00616-204ENST00000513895 CCDC116Q8IYX3 515 aa10.1□□□□□ -0.79
LINC00616-204ENST00000513895 EMILIN1Q9Y6C2 1016 aa10.1□□□□□ -0.79
LINC00616-204ENST00000513895 SOS2Q07890 1332 aaPredicted RBP10.09□□□□□ -0.79
LINC00616-204ENST00000513895 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
LINC00616-204ENST00000513895 ERFEQ4G0M1 354 aa10.09□□□□□ -0.79
LINC00616-204ENST00000513895 CARD14Q9BXL6 1004 aa10.09□□□□□ -0.79
LINC00616-204ENST00000513895 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
LINC00616-204ENST00000513895 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
LINC00616-204ENST00000513895 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
LINC00616-204ENST00000513895 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
LINC00616-204ENST00000513895 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
LINC00616-204ENST00000513895 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
LINC00616-204ENST00000513895 POLR3EQ9NVU0 708 aa10.07□□□□□ -0.8
LINC00616-204ENST00000513895 CTDSPL2Q05D32 466 aa10.05□□□□□ -0.8
LINC00616-204ENST00000513895 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
LINC00616-204ENST00000513895 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.8
LINC00616-204ENST00000513895 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
LINC00616-204ENST00000513895 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
LINC00616-204ENST00000513895 ARHGAP9Q9BRR9 750 aa10.03□□□□□ -0.8
LINC00616-204ENST00000513895 TTLL8A6PVC2 850 aa10.02□□□□□ -0.81
LINC00616-204ENST00000513895 LRRN4Q8WUT4 740 aa10.02□□□□□ -0.81
LINC00616-204ENST00000513895 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
LINC00616-204ENST00000513895 FKBPLQ9UIM3 349 aa10.02□□□□□ -0.81
LINC00616-204ENST00000513895 Q6ZVU0 165 aa10.01□□□□□ -0.81
LINC00616-204ENST00000513895 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
LINC00616-204ENST00000513895 CDV3Q9UKY7 258 aaKnown RBP10.01□□□□□ -0.81
LINC00616-204ENST00000513895 ERCC6Q03468 1493 aa10.01□□□□□ -0.81
LINC00616-204ENST00000513895 CBLBQ13191 982 aa10□□□□□ -0.81
LINC00616-204ENST00000513895 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
LINC00616-204ENST00000513895 SPINT1O43278 529 aa9.99□□□□□ -0.81
LINC00616-204ENST00000513895 PTSQ03393 145 aa9.99□□□□□ -0.81
LINC00616-204ENST00000513895 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
LINC00616-204ENST00000513895 KCTD15Q96SI1 283 aaPredicted RBP9.99□□□□□ -0.81
LINC00616-204ENST00000513895 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
LINC00616-204ENST00000513895 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
LINC00616-204ENST00000513895 MRC2Q9UBG0 1479 aa9.98□□□□□ -0.81
LINC00616-204ENST00000513895 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
LINC00616-204ENST00000513895 NR6A1Q15406 480 aa9.98□□□□□ -0.81
LINC00616-204ENST00000513895 KRT76Q01546 638 aa9.97□□□□□ -0.81
LINC00616-204ENST00000513895 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
LINC00616-204ENST00000513895 SH3D19Q5HYK7 790 aa9.97□□□□□ -0.81
LINC00616-204ENST00000513895 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
LINC00616-204ENST00000513895 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00616-204ENST00000513895 WRNQ14191 1432 aaPredicted RBP eCLIP9.97□□□□□ -0.81
LINC00616-204ENST00000513895 CUX1P39880 1505 aa9.97□□□□□ -0.81
LINC00616-204ENST00000513895 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
LINC00616-204ENST00000513895 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
LINC00616-204ENST00000513895 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.82
LINC00616-204ENST00000513895 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.82
LINC00616-204ENST00000513895 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.82
LINC00616-204ENST00000513895 WDR62O43379 1518 aa9.96□□□□□ -0.82
LINC00616-204ENST00000513895 DNMBPQ6XZF7 1577 aa9.96□□□□□ -0.82
LINC00616-204ENST00000513895 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
LINC00616-204ENST00000513895 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
LINC00616-204ENST00000513895 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
LINC00616-204ENST00000513895 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
LINC00616-204ENST00000513895 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
LINC00616-204ENST00000513895 CCDC155Q8N6L0 562 aa9.94□□□□□ -0.82
LINC00616-204ENST00000513895 PTK2Q05397 1052 aa9.93□□□□□ -0.82
LINC00616-204ENST00000513895 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
LINC00616-204ENST00000513895 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
LINC00616-204ENST00000513895 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
LINC00616-204ENST00000513895 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
LINC00616-204ENST00000513895 GPSM3Q9Y4H4 160 aa9.93□□□□□ -0.82
LINC00616-204ENST00000513895 ADAM32Q8TC27 787 aa9.92□□□□□ -0.82
LINC00616-204ENST00000513895 AGBL1Q96MI9 1066 aa9.92□□□□□ -0.82
LINC00616-204ENST00000513895 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
LINC00616-204ENST00000513895 SLC35F4A4IF30 521 aa9.91□□□□□ -0.82
LINC00616-204ENST00000513895 RELBQ01201 579 aa9.91□□□□□ -0.82
LINC00616-204ENST00000513895 NBPF20Q3BBV1 942 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms