RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 COL18A1P39060 1754 aa9.75□□□□□ -0.85
RAPGEF2-212ENST00000513816 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
RAPGEF2-212ENST00000513816 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 CRB1P82279 1406 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 IP6K1Q92551 441 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 COL5A2P05997 1499 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 BARGINQ6ZT62 677 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
RAPGEF2-212ENST00000513816 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 LTN1O94822 1766 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 FLT4P35916 1363 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 CCDC9Q9Y3X0 531 aaKnown RBP9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 AMPHP49418 695 aa9.73□□□□□ -0.85
RAPGEF2-212ENST00000513816 SPATA31A1Q5TZJ5 1347 aa9.72□□□□□ -0.85
RAPGEF2-212ENST00000513816 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
RAPGEF2-212ENST00000513816 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
RAPGEF2-212ENST00000513816 GLI3P10071 1580 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 MORC1Q86VD1 984 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 INSRP06213 1382 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 CHRNA2Q15822 529 aa9.71□□□□□ -0.85
RAPGEF2-212ENST00000513816 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 ERBB3P21860 1342 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 ZBTB7CA1YPR0 619 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 TOM1L2Q6ZVM7 507 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
RAPGEF2-212ENST00000513816 THSD7AQ9UPZ6 1657 aa9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 RGS12O14924 1447 aa9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 HOXC9P31274 260 aa9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 SOCS7O14512 581 aa9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 PARP4Q9UKK3 1724 aaKnown RBP9.69□□□□□ -0.86
RAPGEF2-212ENST00000513816 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
RAPGEF2-212ENST00000513816 ANKRD24Q8TF21 1146 aa9.68□□□□□ -0.86
RAPGEF2-212ENST00000513816 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
RAPGEF2-212ENST00000513816 SOX12O15370 315 aa9.68□□□□□ -0.86
RAPGEF2-212ENST00000513816 LARP1Q6PKG0 1096 aaKnown RBP9.67□□□□□ -0.86
RAPGEF2-212ENST00000513816 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
RAPGEF2-212ENST00000513816 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 A0A0G2JS52 829 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 MYT1Q01538 1121 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
RAPGEF2-212ENST00000513816 RGPD5Q99666 1765 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 DISP2A7MBM2 1401 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 BCL9O00512 1426 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 IL2RBP14784 551 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
RAPGEF2-212ENST00000513816 RALBP1Q15311 655 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 OVOS2A0A0G2JMS6 1433 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 TNS2Q63HR2 1409 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 DDB1Q16531 1140 aa9.64□□□□□ -0.87
RAPGEF2-212ENST00000513816 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 EXOC5O00471 708 aa9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 RRS1Q15050 365 aaKnown RBP9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 SF3B2Q13435 895 aaKnown RBP9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■□ 19.3
RAPGEF2-212ENST00000513816 PEAK1Q9H792 1746 aa9.63□□□□□ -0.87
RAPGEF2-212ENST00000513816 EMILIN1Q9Y6C2 1016 aa9.62□□□□□ -0.87
RAPGEF2-212ENST00000513816 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
RAPGEF2-212ENST00000513816 LRRC37A3O60309 1634 aa9.62□□□□□ -0.87
RAPGEF2-212ENST00000513816 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
RAPGEF2-212ENST00000513816 BRWD3Q6RI45 1802 aa9.61□□□□□ -0.87
RAPGEF2-212ENST00000513816 PARD3Q8TEW0 1356 aa9.61□□□□□ -0.87
RAPGEF2-212ENST00000513816 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF2-212ENST00000513816 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
RAPGEF2-212ENST00000513816 HSP90AB2PQ58FF8 381 aa9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 USP35Q9P2H5 1018 aa9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 IGSF1Q8N6C5 1336 aa9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 PNNQ9H307 717 aaKnown RBP9.6□□□□□ -0.87
RAPGEF2-212ENST00000513816 DIAPH1O60610 1272 aaKnown RBP9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 AMOTQ4VCS5 1084 aa9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 PCDH11XQ9BZA7 1347 aa9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 PCDH11YQ9BZA8 1340 aa9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 HSP90AB1P08238 724 aaKnown RBP9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 MTHFSP49914 203 aa9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 EIF4A2Q14240 407 aaKnown RBP9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.87
RAPGEF2-212ENST00000513816 TNNT2P45379 298 aaPredicted RBP9.58□□□□□ -0.88
RAPGEF2-212ENST00000513816 BAG6P46379 1132 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms