RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 ADAMTS8Q9UP79 889 aa5.06□□□□□ -1.6
SMN1-208ENST00000513228 NR6A1Q15406 480 aa5.05□□□□□ -1.6
SMN1-208ENST00000513228 ZBTB33Q86T24 672 aa5.05□□□□□ -1.6
SMN1-208ENST00000513228 ARHGAP9Q9BRR9 750 aa5.05□□□□□ -1.6
SMN1-208ENST00000513228 CAPN5O15484 640 aaPredicted RBP5.04□□□□□ -1.6
SMN1-208ENST00000513228 USP17L8P0C7I0 530 aa5.04□□□□□ -1.6
SMN1-208ENST00000513228 RFC5P40937 340 aa5.04□□□□□ -1.6
SMN1-208ENST00000513228 VASH1Q7L8A9 365 aaPredicted RBP5.04□□□□□ -1.6
SMN1-208ENST00000513228 RAB15P59190 212 aa5.03□□□□□ -1.6
SMN1-208ENST00000513228 NNTQ13423 1086 aa5.03□□□□□ -1.6
SMN1-208ENST00000513228 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
SMN1-208ENST00000513228 SLC10A4Q96EP9 437 aa5.03□□□□□ -1.6
SMN1-208ENST00000513228 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMN1-208ENST00000513228 FKBPLQ9UIM3 349 aa5.03□□□□□ -1.6
SMN1-208ENST00000513228 SIAH2O43255 324 aa5.02□□□□□ -1.61
SMN1-208ENST00000513228 IRS1P35568 1242 aa5.02□□□□□ -1.61
SMN1-208ENST00000513228 WDR4P57081 412 aaKnown RBP5.02□□□□□ -1.61
SMN1-208ENST00000513228 PTK2Q05397 1052 aa5.02□□□□□ -1.61
SMN1-208ENST00000513228 TMEM259Q4ZIN3 620 aa5.02□□□□□ -1.61
SMN1-208ENST00000513228 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
SMN1-208ENST00000513228 UPP2O95045 317 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 ADH1CP00326 375 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 BMP1P13497 986 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 FSHRP23945 695 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 SCARF1Q14162 830 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 FBXO31Q5XUX0 539 aaPredicted RBP5.01□□□□□ -1.61
SMN1-208ENST00000513228 PPP2R2DQ66LE6 453 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 GPKOWQ92917 476 aaPredicted RBP eCLIP5.01□□□□□ -1.61
SMN1-208ENST00000513228 GOPCQ9HD26 462 aa5.01□□□□□ -1.61
SMN1-208ENST00000513228 MSTNO14793 375 aa5□□□□□ -1.61
SMN1-208ENST00000513228 ZIC2O95409 532 aaPredicted RBP5□□□□□ -1.61
SMN1-208ENST00000513228 VSIG8P0DPA2 414 aa5□□□□□ -1.61
SMN1-208ENST00000513228 DZIP3Q86Y13 1208 aaKnown RBP5□□□□□ -1.61
SMN1-208ENST00000513228 EPS8L1Q8TE68 723 aa5□□□□□ -1.61
SMN1-208ENST00000513228 APBB1O00213 710 aa4.99□□□□□ -1.61
SMN1-208ENST00000513228 NR5A1Q13285 461 aa4.99□□□□□ -1.61
SMN1-208ENST00000513228 C4orf48Q5BLP8 95 aa4.99□□□□□ -1.61
SMN1-208ENST00000513228 C6orf118Q5T5N4 469 aa4.99□□□□□ -1.61
SMN1-208ENST00000513228 PDXDC2PQ6P474 469 aa4.99□□□□□ -1.61
SMN1-208ENST00000513228 HMX1Q9NP08 348 aaPredicted RBP4.99□□□□□ -1.61
SMN1-208ENST00000513228 BMP2P12643 396 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 ERFEQ4G0M1 354 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 KANK3Q6NY19 840 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 SH3BP5LQ7L8J4 393 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 PRM3Q9NNZ6 103 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 PCDHB9Q9Y5E1 797 aa4.98□□□□□ -1.61
SMN1-208ENST00000513228 ZC3H4Q9UPT8 1303 aaKnown RBP4.97□□□□□ -1.61
SMN1-208ENST00000513228 K7ELQ4 463 aaPredicted RBP4.97□□□□□ -1.61
SMN1-208ENST00000513228 ADAM32Q8TC27 787 aa4.97□□□□□ -1.61
SMN1-208ENST00000513228 ITPKCQ96DU7 683 aa4.97□□□□□ -1.61
SMN1-208ENST00000513228 CDK15Q96Q40 435 aa4.97□□□□□ -1.61
SMN1-208ENST00000513228 PURBQ96QR8 312 aaKnown RBP4.97□□□□□ -1.61
SMN1-208ENST00000513228 KCTD15Q96SI1 283 aaPredicted RBP4.97□□□□□ -1.61
SMN1-208ENST00000513228 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
SMN1-208ENST00000513228 ESF1Q9H501 851 aaKnown RBP4.97□□□□□ -1.61
SMN1-208ENST00000513228 ZFAND3Q9H8U3 227 aa4.97□□□□□ -1.61
SMN1-208ENST00000513228 TIMP2P16035 220 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 NBPF20Q3BBV1 942 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 MRPL14Q6P1L8 145 aaKnown RBP4.96□□□□□ -1.62
SMN1-208ENST00000513228 CCDC116Q8IYX3 515 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 MPNDQ8N594 471 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 SPOCK3Q9BQ16 436 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 PGPEP1Q9NXJ5 209 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 CDV3Q9UKY7 258 aaKnown RBP4.96□□□□□ -1.62
SMN1-208ENST00000513228 ZNF330Q9Y3S2 320 aaPredicted RBP4.96□□□□□ -1.62
SMN1-208ENST00000513228 EMILIN1Q9Y6C2 1016 aa4.96□□□□□ -1.62
SMN1-208ENST00000513228 NR3C2P08235 984 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 GRM5P41594 1212 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 DHX9Q08211 1270 aaKnown RBP4.95□□□□□ -1.62
SMN1-208ENST00000513228 SH3RF1Q7Z6J0 888 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 ZFP42Q96MM3 310 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 NDUFB9Q9Y6M9 179 aa4.95□□□□□ -1.62
SMN1-208ENST00000513228 ZBBXA8MT70 800 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 MAN1A2O60476 641 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 PPP1R26Q5T8A7 1209 aaPredicted RBP4.94□□□□□ -1.62
SMN1-208ENST00000513228 C1QTNF2Q9BXJ5 285 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 SNRKQ9NRH2 765 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 GPSM3Q9Y4H4 160 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 MAP4K5Q9Y4K4 846 aa4.94□□□□□ -1.62
SMN1-208ENST00000513228 TRIM46Q7Z4K8 759 aa4.93□□□□□ -1.62
SMN1-208ENST00000513228 TRMT44Q8IYL2 757 aaKnown RBP4.93□□□□□ -1.62
SMN1-208ENST00000513228 BANK1Q8NDB2 785 aa4.93□□□□□ -1.62
SMN1-208ENST00000513228 GOLGA2P5Q9HBQ8 144 aa4.93□□□□□ -1.62
SMN1-208ENST00000513228 ABL2P42684 1182 aa4.92□□□□□ -1.62
SMN1-208ENST00000513228 RELBQ01201 579 aa4.92□□□□□ -1.62
SMN1-208ENST00000513228 PLA2G4EQ3MJ16 856 aa4.92□□□□□ -1.62
SMN1-208ENST00000513228 TRIM52Q96A61 297 aa4.92□□□□□ -1.62
SMN1-208ENST00000513228 TSEN34Q9BSV6 310 aaKnown RBP4.92□□□□□ -1.62
SMN1-208ENST00000513228 TRIM34Q9BYJ4 488 aa4.92□□□□□ -1.62
SMN1-208ENST00000513228 SOBPA7XYQ1 873 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 FBXO45P0C2W1 286 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 CBLBQ13191 982 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
SMN1-208ENST00000513228 LINC00528Q8N1L1 170 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 ZNF592Q92610 1267 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 AGBL1Q96MI9 1066 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 TMPRSS4Q9NRS4 437 aa4.91□□□□□ -1.62
SMN1-208ENST00000513228 FIGNL2A6NMB9 653 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms