RNA–Protein interactions for RNA: ENST00000513151.5

SKP2-206, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3

Gene SKP2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-206ENST00000513151 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
SKP2-206ENST00000513151 GLI3P10071 1580 aa12.32□□□□□ -0.44
SKP2-206ENST00000513151 RGS12O14924 1447 aa12.32□□□□□ -0.44
SKP2-206ENST00000513151 LARP1Q6PKG0 1096 aaKnown RBP12.32□□□□□ -0.44
SKP2-206ENST00000513151 SPATA31A1Q5TZJ5 1347 aa12.32□□□□□ -0.44
SKP2-206ENST00000513151 FBLN1P23142 703 aa12.31□□□□□ -0.44
SKP2-206ENST00000513151 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
SKP2-206ENST00000513151 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
SKP2-206ENST00000513151 COL5A2P05997 1499 aaPredicted RBP12.31□□□□□ -0.44
SKP2-206ENST00000513151 COL18A1P39060 1754 aa12.3□□□□□ -0.44
SKP2-206ENST00000513151 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SKP2-206ENST00000513151 IP6K1Q92551 441 aa12.3□□□□□ -0.44
SKP2-206ENST00000513151 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
SKP2-206ENST00000513151 ABCC6O95255 1503 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 CSB-PGBD3P0DP91 1061 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 AMPHP49418 695 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
SKP2-206ENST00000513151 CRB1P82279 1406 aa12.28□□□□□ -0.44
SKP2-206ENST00000513151 A0A0G2JS52 829 aa12.28□□□□□ -0.44
SKP2-206ENST00000513151 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
SKP2-206ENST00000513151 MYT1Q01538 1121 aa12.28□□□□□ -0.44
SKP2-206ENST00000513151 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
SKP2-206ENST00000513151 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
SKP2-206ENST00000513151 TCP11L2Q8N4U5 519 aa12.28□□□□□ -0.44
SKP2-206ENST00000513151 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
SKP2-206ENST00000513151 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.44
SKP2-206ENST00000513151 HOXC9P31274 260 aa12.27□□□□□ -0.45
SKP2-206ENST00000513151 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
SKP2-206ENST00000513151 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
SKP2-206ENST00000513151 NSD2O96028 1365 aa12.27□□□□□ -0.45
SKP2-206ENST00000513151 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
SKP2-206ENST00000513151 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
SKP2-206ENST00000513151 ERBB3P21860 1342 aa12.26□□□□□ -0.45
SKP2-206ENST00000513151 LTN1O94822 1766 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 KRT27Q7Z3Y8 459 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
SKP2-206ENST00000513151 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
SKP2-206ENST00000513151 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
SKP2-206ENST00000513151 POLKQ9UBT6 870 aa12.24□□□□□ -0.45
SKP2-206ENST00000513151 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
SKP2-206ENST00000513151 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
SKP2-206ENST00000513151 FLT4P35916 1363 aa12.23□□□□□ -0.45
SKP2-206ENST00000513151 PPM1GO15355 546 aaPredicted RBP12.23□□□□□ -0.45
SKP2-206ENST00000513151 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
SKP2-206ENST00000513151 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
SKP2-206ENST00000513151 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
SKP2-206ENST00000513151 INSRP06213 1382 aa12.22□□□□□ -0.45
SKP2-206ENST00000513151 PDE3BQ13370 1112 aa12.22□□□□□ -0.45
SKP2-206ENST00000513151 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
SKP2-206ENST00000513151 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.45
SKP2-206ENST00000513151 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
SKP2-206ENST00000513151 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
SKP2-206ENST00000513151 DDB1Q16531 1140 aa12.2□□□□□ -0.46
SKP2-206ENST00000513151 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
SKP2-206ENST00000513151 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 EXOC5O00471 708 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 PEAK1Q9H792 1746 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
SKP2-206ENST00000513151 IL2RBP14784 551 aa12.18□□□□□ -0.46
SKP2-206ENST00000513151 FAM182BQ5T319 152 aa12.18□□□□□ -0.46
SKP2-206ENST00000513151 CCDC125Q86Z20 511 aa12.18□□□□□ -0.46
SKP2-206ENST00000513151 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
SKP2-206ENST00000513151 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
SKP2-206ENST00000513151 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
SKP2-206ENST00000513151 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
SKP2-206ENST00000513151 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
SKP2-206ENST00000513151 MTHFSP49914 203 aa12.15□□□□□ -0.46
SKP2-206ENST00000513151 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
SKP2-206ENST00000513151 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
SKP2-206ENST00000513151 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
SKP2-206ENST00000513151 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SKP2-206ENST00000513151 RAPGEF4Q8WZA2 1011 aa12.14□□□□□ -0.47
SKP2-206ENST00000513151 EYA1Q99502 592 aa12.14□□□□□ -0.47
SKP2-206ENST00000513151 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
SKP2-206ENST00000513151 TATP17735 454 aaPredicted RBP12.13□□□□□ -0.47
SKP2-206ENST00000513151 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
SKP2-206ENST00000513151 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
SKP2-206ENST00000513151 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
SKP2-206ENST00000513151 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
SKP2-206ENST00000513151 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
SKP2-206ENST00000513151 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
SKP2-206ENST00000513151 TRIM37O94972 964 aa12.11□□□□□ -0.47
SKP2-206ENST00000513151 DDX54Q8TDD1 881 aaKnown RBP12.11□□□□□ -0.47
SKP2-206ENST00000513151 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
SKP2-206ENST00000513151 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
SKP2-206ENST00000513151 IL13P35225 146 aa12.1□□□□□ -0.47
SKP2-206ENST00000513151 MEGF6O75095 1541 aa12.1□□□□□ -0.47
SKP2-206ENST00000513151 BCL9O00512 1426 aa12.1□□□□□ -0.47
SKP2-206ENST00000513151 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
SKP2-206ENST00000513151 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
SKP2-206ENST00000513151 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
SKP2-206ENST00000513151 BAG6P46379 1132 aa12.09□□□□□ -0.47
SKP2-206ENST00000513151 APBA3O96018 575 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms