RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FNBP4Q8N3X1 1017 aaPredicted RBP20.01■□□□□ 0.79
RNF4-213ENST00000509388 STRN4Q9NRL3 753 aa20.01■□□□□ 0.79
RNF4-213ENST00000509388 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
RNF4-213ENST00000509388 AFF2P51816 1311 aa20.01■□□□□ 0.79
RNF4-213ENST00000509388 RTL1A6NKG5 1358 aa20■□□□□ 0.79
RNF4-213ENST00000509388 FLT4P35916 1363 aa20■□□□□ 0.79
RNF4-213ENST00000509388 LTV1Q96GA3 475 aaPredicted RBP20■□□□□ 0.79
RNF4-213ENST00000509388 AXIN2Q9Y2T1 843 aa20■□□□□ 0.79
RNF4-213ENST00000509388 UNC5CLQ8IV45 518 aa19.99■□□□□ 0.79
RNF4-213ENST00000509388 CFAP53Q96M91 514 aa19.99■□□□□ 0.79
RNF4-213ENST00000509388 HSP90AB2PQ58FF8 381 aa19.98■□□□□ 0.79
RNF4-213ENST00000509388 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
RNF4-213ENST00000509388 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
RNF4-213ENST00000509388 MYBBP1AQ9BQG0 1328 aaKnown RBP19.98■□□□□ 0.79
RNF4-213ENST00000509388 ANKRD24Q8TF21 1146 aa19.97■□□□□ 0.79
RNF4-213ENST00000509388 COL14A1Q05707 1796 aaKnown RBP19.97■□□□□ 0.79
RNF4-213ENST00000509388 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
RNF4-213ENST00000509388 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
RNF4-213ENST00000509388 SLIT2O94813 1529 aa19.95■□□□□ 0.78
RNF4-213ENST00000509388 INSRP06213 1382 aa19.95■□□□□ 0.78
RNF4-213ENST00000509388 SMG6Q86US8 1419 aaKnown RBP19.94■□□□□ 0.78
RNF4-213ENST00000509388 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
RNF4-213ENST00000509388 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
RNF4-213ENST00000509388 NLRP2Q9NX02 1062 aa19.93■□□□□ 0.78
RNF4-213ENST00000509388 ERBB3P21860 1342 aa19.93■□□□□ 0.78
RNF4-213ENST00000509388 CAMTA1Q9Y6Y1 1673 aa19.93■□□□□ 0.78
RNF4-213ENST00000509388 ABCC6O95255 1503 aa19.92■□□□□ 0.78
RNF4-213ENST00000509388 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
RNF4-213ENST00000509388 LARP1Q6PKG0 1096 aaKnown RBP19.92■□□□□ 0.78
RNF4-213ENST00000509388 WDR17Q8IZU2 1322 aa19.92■□□□□ 0.78
RNF4-213ENST00000509388 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
RNF4-213ENST00000509388 LTN1O94822 1766 aa19.91■□□□□ 0.78
RNF4-213ENST00000509388 VPS72Q15906 364 aa19.91■□□□□ 0.78
RNF4-213ENST00000509388 USP35Q9P2H5 1018 aa19.91■□□□□ 0.78
RNF4-213ENST00000509388 COL5A2P05997 1499 aaPredicted RBP19.91■□□□□ 0.78
RNF4-213ENST00000509388 CDK12Q9NYV4 1490 aaPredicted RBP19.91■□□□□ 0.78
RNF4-213ENST00000509388 EIF4A2Q14240 407 aaKnown RBP19.9■□□□□ 0.78
RNF4-213ENST00000509388 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
RNF4-213ENST00000509388 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
RNF4-213ENST00000509388 LMO7Q8WWI1 1683 aa19.88■□□□□ 0.77
RNF4-213ENST00000509388 COL18A1P39060 1754 aa19.88■□□□□ 0.77
RNF4-213ENST00000509388 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
RNF4-213ENST00000509388 CRB1P82279 1406 aa19.87■□□□□ 0.77
RNF4-213ENST00000509388 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
RNF4-213ENST00000509388 CARD10Q9BWT7 1032 aa19.87■□□□□ 0.77
RNF4-213ENST00000509388 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
RNF4-213ENST00000509388 NWD2Q9ULI1 1742 aa19.86■□□□□ 0.77
RNF4-213ENST00000509388 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
RNF4-213ENST00000509388 IL13P35225 146 aa19.86■□□□□ 0.77
RNF4-213ENST00000509388 SPATA31A5Q5VU36 1347 aa19.85■□□□□ 0.77
RNF4-213ENST00000509388 SPATA31A7Q8IWB4 1347 aa19.85■□□□□ 0.77
RNF4-213ENST00000509388 NBPF6Q5VWK0 638 aa19.85■□□□□ 0.77
RNF4-213ENST00000509388 TCP11L2Q8N4U5 519 aa19.85■□□□□ 0.77
RNF4-213ENST00000509388 NBPF4Q96M43 638 aa19.85■□□□□ 0.77
RNF4-213ENST00000509388 RGS17Q9UGC6 210 aaPredicted RBP19.85■□□□□ 0.77
RNF4-213ENST00000509388 SPATA31A1Q5TZJ5 1347 aa19.84■□□□□ 0.77
RNF4-213ENST00000509388 RXRBP28702 533 aa19.84■□□□□ 0.77
RNF4-213ENST00000509388 RBM6P78332 1123 aaKnown RBP19.84■□□□□ 0.77
RNF4-213ENST00000509388 EYA1Q99502 592 aa19.84■□□□□ 0.77
RNF4-213ENST00000509388 THRAP3Q9Y2W1 955 aaKnown RBP19.84■□□□□ 0.77
RNF4-213ENST00000509388 ATRNO75882 1429 aa19.84■□□□□ 0.77
RNF4-213ENST00000509388 A0A0G2JS52 829 aa19.83■□□□□ 0.77
RNF4-213ENST00000509388 MYT1Q01538 1121 aa19.83■□□□□ 0.77
RNF4-213ENST00000509388 USHBP1Q8N6Y0 703 aa19.83■□□□□ 0.77
RNF4-213ENST00000509388 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
RNF4-213ENST00000509388 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
RNF4-213ENST00000509388 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.76
RNF4-213ENST00000509388 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
RNF4-213ENST00000509388 POTEAQ6S8J7 498 aa19.81■□□□□ 0.76
RNF4-213ENST00000509388 NRAPQ86VF7 1730 aa19.8■□□□□ 0.76
RNF4-213ENST00000509388 FAM98CQ17RN3 349 aaKnown RBP19.8■□□□□ 0.76
RNF4-213ENST00000509388 SULT6B1Q6IMI4 303 aa19.8■□□□□ 0.76
RNF4-213ENST00000509388 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
RNF4-213ENST00000509388 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
RNF4-213ENST00000509388 IGSF1Q8N6C5 1336 aa19.79■□□□□ 0.76
RNF4-213ENST00000509388 IL2RBP14784 551 aa19.79■□□□□ 0.76
RNF4-213ENST00000509388 BARGINQ6ZT62 677 aa19.79■□□□□ 0.76
RNF4-213ENST00000509388 MIER1Q8N108 512 aa19.79■□□□□ 0.76
RNF4-213ENST00000509388 RGPD5Q99666 1765 aa19.79■□□□□ 0.76
RNF4-213ENST00000509388 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.79■□□□□ 0.76
RNF4-213ENST00000509388 HMOX1P09601 288 aa19.78■□□□□ 0.76
RNF4-213ENST00000509388 TATP17735 454 aaPredicted RBP19.78■□□□□ 0.76
RNF4-213ENST00000509388 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
RNF4-213ENST00000509388 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
RNF4-213ENST00000509388 CCDC184Q52MB2 194 aa19.76■□□□□ 0.75
RNF4-213ENST00000509388 NEFMP07197 916 aa19.75■□□□□ 0.75
RNF4-213ENST00000509388 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
RNF4-213ENST00000509388 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
RNF4-213ENST00000509388 EXOC5O00471 708 aa19.74■□□□□ 0.75
RNF4-213ENST00000509388 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
RNF4-213ENST00000509388 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
RNF4-213ENST00000509388 ONECUT3O60422 494 aaPredicted RBP19.73■□□□□ 0.75
RNF4-213ENST00000509388 FCHSD2O94868 740 aa19.73■□□□□ 0.75
RNF4-213ENST00000509388 DDB1Q16531 1140 aa19.72■□□□□ 0.75
RNF4-213ENST00000509388 PDE3BQ13370 1112 aa19.71■□□□□ 0.75
RNF4-213ENST00000509388 PLEKHO1Q53GL0 409 aaPredicted RBP19.71■□□□□ 0.75
RNF4-213ENST00000509388 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
RNF4-213ENST00000509388 KDRP35968 1356 aa19.7■□□□□ 0.74
RNF4-213ENST00000509388 GLI3P10071 1580 aa19.7■□□□□ 0.74
RNF4-213ENST00000509388 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms