RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 PANK3Q9H999 370 aa14.61□□□□□ -0.07
POLR2J3-213ENST00000508848 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
POLR2J3-213ENST00000508848 SPATA31A1Q5TZJ5 1347 aa14.61□□□□□ -0.07
POLR2J3-213ENST00000508848 NSD2O96028 1365 aa14.6□□□□□ -0.07
POLR2J3-213ENST00000508848 LTN1O94822 1766 aa14.6□□□□□ -0.07
POLR2J3-213ENST00000508848 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
POLR2J3-213ENST00000508848 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
POLR2J3-213ENST00000508848 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
POLR2J3-213ENST00000508848 IP6K1Q92551 441 aa14.59□□□□□ -0.07
POLR2J3-213ENST00000508848 AXIN2Q9Y2T1 843 aa14.59□□□□□ -0.07
POLR2J3-213ENST00000508848 WDR17Q8IZU2 1322 aa14.59□□□□□ -0.07
POLR2J3-213ENST00000508848 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
POLR2J3-213ENST00000508848 RGS12O14924 1447 aa14.58□□□□□ -0.07
POLR2J3-213ENST00000508848 BLMP54132 1417 aaPredicted RBP14.58□□□□□ -0.07
POLR2J3-213ENST00000508848 CRB1P82279 1406 aa14.58□□□□□ -0.07
POLR2J3-213ENST00000508848 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.07
POLR2J3-213ENST00000508848 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.07
POLR2J3-213ENST00000508848 PER1O15534 1290 aaPredicted RBP14.58□□□□□ -0.08
POLR2J3-213ENST00000508848 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 CARD10Q9BWT7 1032 aa14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 NPC1L1Q9UHC9 1359 aa14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 EP400Q96L91 3159 aa14.57□□□□□ -0.08
POLR2J3-213ENST00000508848 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
POLR2J3-213ENST00000508848 CCDC9Q9Y3X0 531 aaKnown RBP14.56□□□□□ -0.08
POLR2J3-213ENST00000508848 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
POLR2J3-213ENST00000508848 LARP1Q6PKG0 1096 aaKnown RBP14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 SEPT12Q8IYM1 358 aa14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 KNSTRNQ9Y448 316 aa14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 FAM208AQ9UK61 1670 aaKnown RBP14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 BRWD3Q6RI45 1802 aa14.55□□□□□ -0.08
POLR2J3-213ENST00000508848 STRN4Q9NRL3 753 aa14.54□□□□□ -0.08
POLR2J3-213ENST00000508848 ERBB3P21860 1342 aa14.54□□□□□ -0.08
POLR2J3-213ENST00000508848 MAP3K19Q56UN5 1328 aa14.54□□□□□ -0.08
POLR2J3-213ENST00000508848 AMER1Q5JTC6 1135 aaPredicted RBP14.53□□□□□ -0.08
POLR2J3-213ENST00000508848 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
POLR2J3-213ENST00000508848 HOXC9P31274 260 aa14.52□□□□□ -0.09
POLR2J3-213ENST00000508848 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.09
POLR2J3-213ENST00000508848 PARP4Q9UKK3 1724 aaKnown RBP14.52□□□□□ -0.09
POLR2J3-213ENST00000508848 INSRP06213 1382 aa14.51□□□□□ -0.09
POLR2J3-213ENST00000508848 AMPHP49418 695 aa14.51□□□□□ -0.09
POLR2J3-213ENST00000508848 TOM1L2Q6ZVM7 507 aa14.51□□□□□ -0.09
POLR2J3-213ENST00000508848 FLT4P35916 1363 aa14.5□□□□□ -0.09
POLR2J3-213ENST00000508848 SOX12O15370 315 aa14.5□□□□□ -0.09
POLR2J3-213ENST00000508848 KRT27Q7Z3Y8 459 aa14.5□□□□□ -0.09
POLR2J3-213ENST00000508848 UPF1Q92900 1129 aaKnown RBP eCLIP14.5□□□□□ -0.09
POLR2J3-213ENST00000508848 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
POLR2J3-213ENST00000508848 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
POLR2J3-213ENST00000508848 DISP2A7MBM2 1401 aa14.48□□□□□ -0.09
POLR2J3-213ENST00000508848 WNK3Q9BYP7 1800 aa14.48□□□□□ -0.09
POLR2J3-213ENST00000508848 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
POLR2J3-213ENST00000508848 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
POLR2J3-213ENST00000508848 BCL9O00512 1426 aa14.47□□□□□ -0.09
POLR2J3-213ENST00000508848 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
POLR2J3-213ENST00000508848 FBLN1P23142 703 aa14.46□□□□□ -0.09
POLR2J3-213ENST00000508848 RRS1Q15050 365 aaKnown RBP14.46□□□□□ -0.09
POLR2J3-213ENST00000508848 FAM196AQ6ZSG2 479 aa14.46□□□□□ -0.09
POLR2J3-213ENST00000508848 MORC1Q86VD1 984 aa14.46□□□□□ -0.09
POLR2J3-213ENST00000508848 SMG6Q86US8 1419 aaKnown RBP14.46□□□□□ -0.09
POLR2J3-213ENST00000508848 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
POLR2J3-213ENST00000508848 PEAK1Q9H792 1746 aa14.45□□□□□ -0.1
POLR2J3-213ENST00000508848 NLRP2Q9NX02 1062 aa14.45□□□□□ -0.1
POLR2J3-213ENST00000508848 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
POLR2J3-213ENST00000508848 NCAPD2Q15021 1401 aa14.44□□□□□ -0.1
POLR2J3-213ENST00000508848 EXOC5O00471 708 aa14.44□□□□□ -0.1
POLR2J3-213ENST00000508848 DDB1Q16531 1140 aa14.44□□□□□ -0.1
POLR2J3-213ENST00000508848 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
POLR2J3-213ENST00000508848 IL2RBP14784 551 aa14.43□□□□□ -0.1
POLR2J3-213ENST00000508848 EMILIN1Q9Y6C2 1016 aa14.43□□□□□ -0.1
POLR2J3-213ENST00000508848 RGPD2P0DJD1 1756 aa14.42□□□□□ -0.1
POLR2J3-213ENST00000508848 A0A0G2JS52 829 aa14.41□□□□□ -0.1
POLR2J3-213ENST00000508848 MYT1Q01538 1121 aa14.41□□□□□ -0.1
POLR2J3-213ENST00000508848 NBPF6Q5VWK0 638 aa14.41□□□□□ -0.1
POLR2J3-213ENST00000508848 NBPF4Q96M43 638 aa14.41□□□□□ -0.1
POLR2J3-213ENST00000508848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.4□□□□□ -0.1
POLR2J3-213ENST00000508848 SBF2Q86WG5 1849 aa14.4□□□□□ -0.1
POLR2J3-213ENST00000508848 LRRC37A3O60309 1634 aa14.4□□□□□ -0.1
POLR2J3-213ENST00000508848 OVOS2A0A0G2JMS6 1433 aa14.39□□□□□ -0.11
POLR2J3-213ENST00000508848 TNS2Q63HR2 1409 aa14.39□□□□□ -0.11
POLR2J3-213ENST00000508848 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
POLR2J3-213ENST00000508848 PPM1GO15355 546 aaPredicted RBP14.37□□□□□ -0.11
POLR2J3-213ENST00000508848 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
POLR2J3-213ENST00000508848 LTV1Q96GA3 475 aaPredicted RBP14.37□□□□□ -0.11
POLR2J3-213ENST00000508848 EYA1Q99502 592 aa14.37□□□□□ -0.11
POLR2J3-213ENST00000508848 TNNT2P45379 298 aaPredicted RBP14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 MTHFSP49914 203 aa14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 ZCRB1Q8TBF4 217 aaKnown RBP14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 IGSF1Q8N6C5 1336 aa14.36□□□□□ -0.11
POLR2J3-213ENST00000508848 CC2D1BQ5T0F9 858 aaKnown RBP14.35□□□□□ -0.11
POLR2J3-213ENST00000508848 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
POLR2J3-213ENST00000508848 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
POLR2J3-213ENST00000508848 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
POLR2J3-213ENST00000508848 IL13P35225 146 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms