RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 FKBPLQ9UIM3 349 aa9.21□□□□□ -0.94
CLOCK-207ENST00000508049 DNMT3LQ9UJW3 386 aa9.21□□□□□ -0.94
CLOCK-207ENST00000508049 PPP1R26Q5T8A7 1209 aaPredicted RBP9.2□□□□□ -0.94
CLOCK-207ENST00000508049 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
CLOCK-207ENST00000508049 NR6A1Q15406 480 aa9.19□□□□□ -0.94
CLOCK-207ENST00000508049 ZBTB33Q86T24 672 aa9.19□□□□□ -0.94
CLOCK-207ENST00000508049 PROCA1Q8NCQ7 364 aaPredicted RBP9.19□□□□□ -0.94
CLOCK-207ENST00000508049 SLC10A4Q96EP9 437 aa9.19□□□□□ -0.94
CLOCK-207ENST00000508049 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
CLOCK-207ENST00000508049 CBLBQ13191 982 aa9.18□□□□□ -0.94
CLOCK-207ENST00000508049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
CLOCK-207ENST00000508049 FBXO31Q5XUX0 539 aaPredicted RBP9.18□□□□□ -0.94
CLOCK-207ENST00000508049 KCTD15Q96SI1 283 aaPredicted RBP9.18□□□□□ -0.94
CLOCK-207ENST00000508049 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
CLOCK-207ENST00000508049 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
CLOCK-207ENST00000508049 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CLOCK-207ENST00000508049 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
CLOCK-207ENST00000508049 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
CLOCK-207ENST00000508049 FAM117AQ9C073 453 aa9.16□□□□□ -0.94
CLOCK-207ENST00000508049 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
CLOCK-207ENST00000508049 AP1G2O75843 785 aa9.15□□□□□ -0.94
CLOCK-207ENST00000508049 PTK2Q05397 1052 aa9.15□□□□□ -0.94
CLOCK-207ENST00000508049 DHX9Q08211 1270 aaKnown RBP9.15□□□□□ -0.94
CLOCK-207ENST00000508049 Q6ZVU0 165 aa9.15□□□□□ -0.94
CLOCK-207ENST00000508049 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
CLOCK-207ENST00000508049 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLOCK-207ENST00000508049 PTSQ03393 145 aa9.14□□□□□ -0.95
CLOCK-207ENST00000508049 PPP2R2DQ66LE6 453 aa9.14□□□□□ -0.95
CLOCK-207ENST00000508049 SPINT1O43278 529 aa9.13□□□□□ -0.95
CLOCK-207ENST00000508049 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
CLOCK-207ENST00000508049 ADAM32Q8TC27 787 aa9.12□□□□□ -0.95
CLOCK-207ENST00000508049 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
CLOCK-207ENST00000508049 OCSTAMPQ9BR26 566 aa9.12□□□□□ -0.95
CLOCK-207ENST00000508049 RELBQ01201 579 aa9.11□□□□□ -0.95
CLOCK-207ENST00000508049 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
CLOCK-207ENST00000508049 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
CLOCK-207ENST00000508049 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
CLOCK-207ENST00000508049 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
CLOCK-207ENST00000508049 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
CLOCK-207ENST00000508049 RAB15P59190 212 aa9.09□□□□□ -0.95
CLOCK-207ENST00000508049 CNTNAP3BQ96NU0 1288 aa9.09□□□□□ -0.95
CLOCK-207ENST00000508049 CNTNAP3Q9BZ76 1288 aa9.09□□□□□ -0.95
CLOCK-207ENST00000508049 CTSOP43234 321 aaPredicted RBP9.08□□□□□ -0.96
CLOCK-207ENST00000508049 KRT76Q01546 638 aa9.08□□□□□ -0.96
CLOCK-207ENST00000508049 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
CLOCK-207ENST00000508049 INSM2Q96T92 566 aaPredicted RBP9.08□□□□□ -0.96
CLOCK-207ENST00000508049 HMX1Q9NP08 348 aaPredicted RBP9.08□□□□□ -0.96
CLOCK-207ENST00000508049 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
CLOCK-207ENST00000508049 TMPRSS4Q9NRS4 437 aa9.08□□□□□ -0.96
CLOCK-207ENST00000508049 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
CLOCK-207ENST00000508049 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
CLOCK-207ENST00000508049 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
CLOCK-207ENST00000508049 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
CLOCK-207ENST00000508049 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
CLOCK-207ENST00000508049 COL25A1Q9BXS0 654 aaPredicted RBP9.06□□□□□ -0.96
CLOCK-207ENST00000508049 ZNF784Q8NCA9 323 aaPredicted RBP9.05□□□□□ -0.96
CLOCK-207ENST00000508049 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
CLOCK-207ENST00000508049 RFC5P40937 340 aa9.04□□□□□ -0.96
CLOCK-207ENST00000508049 VWA5B2Q8N398 1253 aa9.04□□□□□ -0.96
CLOCK-207ENST00000508049 CDC14CA4D256 554 aa9.03□□□□□ -0.96
CLOCK-207ENST00000508049 ADH1AP07327 375 aa9.03□□□□□ -0.96
CLOCK-207ENST00000508049 ITGA6P23229 1130 aa9.03□□□□□ -0.96
CLOCK-207ENST00000508049 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.97
CLOCK-207ENST00000508049 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
CLOCK-207ENST00000508049 LILRA1O75019 489 aa9.01□□□□□ -0.97
CLOCK-207ENST00000508049 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
CLOCK-207ENST00000508049 RNFT1Q5M7Z0 435 aa9.01□□□□□ -0.97
CLOCK-207ENST00000508049 SV2AQ7L0J3 742 aa9.01□□□□□ -0.97
CLOCK-207ENST00000508049 ESPNB1AK53 854 aa9□□□□□ -0.97
CLOCK-207ENST00000508049 PTGIRP43119 386 aa9□□□□□ -0.97
CLOCK-207ENST00000508049 BCANQ96GW7 911 aa9□□□□□ -0.97
CLOCK-207ENST00000508049 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
CLOCK-207ENST00000508049 PCMTD1Q96MG8 357 aaPredicted RBP8.99□□□□□ -0.97
CLOCK-207ENST00000508049 SENP3-EIF4A1A0A087X0R7 540 aa8.98□□□□□ -0.97
CLOCK-207ENST00000508049 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
CLOCK-207ENST00000508049 ZNF385CQ66K41 422 aaPredicted RBP8.98□□□□□ -0.97
CLOCK-207ENST00000508049 SVOPQ8N4V2 548 aa8.98□□□□□ -0.97
CLOCK-207ENST00000508049 KDF1Q8NAX2 398 aaPredicted RBP8.98□□□□□ -0.97
CLOCK-207ENST00000508049 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
CLOCK-207ENST00000508049 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
CLOCK-207ENST00000508049 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
CLOCK-207ENST00000508049 SEPT12Q8IYM1 358 aa8.97□□□□□ -0.97
CLOCK-207ENST00000508049 TRIM52Q96A61 297 aa8.97□□□□□ -0.97
CLOCK-207ENST00000508049 GSK3AP49840 483 aa8.96□□□□□ -0.98
CLOCK-207ENST00000508049 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
CLOCK-207ENST00000508049 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
CLOCK-207ENST00000508049 PCDHB9Q9Y5E1 797 aa8.96□□□□□ -0.98
CLOCK-207ENST00000508049 SLURP2P0DP57 97 aa8.95□□□□□ -0.98
CLOCK-207ENST00000508049 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
CLOCK-207ENST00000508049 TMEM151AQ8N4L1 468 aa8.95□□□□□ -0.98
CLOCK-207ENST00000508049 WHAMMQ8TF30 809 aa8.95□□□□□ -0.98
CLOCK-207ENST00000508049 GOPCQ9HD26 462 aa8.95□□□□□ -0.98
CLOCK-207ENST00000508049 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
CLOCK-207ENST00000508049 RNF225M0QZC1 329 aaPredicted RBP8.94□□□□□ -0.98
CLOCK-207ENST00000508049 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
CLOCK-207ENST00000508049 RASSF7Q02833 373 aa8.94□□□□□ -0.98
CLOCK-207ENST00000508049 GDF11O95390 407 aa8.93□□□□□ -0.98
CLOCK-207ENST00000508049 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
CLOCK-207ENST00000508049 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
CLOCK-207ENST00000508049 RHOQP17081 205 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms