RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
CLOCK-207ENST00000508049 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
CLOCK-207ENST00000508049 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
CLOCK-207ENST00000508049 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
CLOCK-207ENST00000508049 FOXD1Q16676 465 aa21.37■■□□□ 1.01
CLOCK-207ENST00000508049 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
CLOCK-207ENST00000508049 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
CLOCK-207ENST00000508049 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
CLOCK-207ENST00000508049 MSH5O43196 834 aa19.99■□□□□ 0.79
CLOCK-207ENST00000508049 ADRA2BP18089 450 aa19.99■□□□□ 0.79
CLOCK-207ENST00000508049 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
CLOCK-207ENST00000508049 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
CLOCK-207ENST00000508049 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
CLOCK-207ENST00000508049 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
CLOCK-207ENST00000508049 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
CLOCK-207ENST00000508049 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
CLOCK-207ENST00000508049 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
CLOCK-207ENST00000508049 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
CLOCK-207ENST00000508049 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
CLOCK-207ENST00000508049 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CLOCK-207ENST00000508049 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
CLOCK-207ENST00000508049 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
CLOCK-207ENST00000508049 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
CLOCK-207ENST00000508049 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
CLOCK-207ENST00000508049 C1QBPQ07021 282 aaKnown RBP16.81■□□□□ 0.28
CLOCK-207ENST00000508049 KCNA4P22459 653 aa16.76■□□□□ 0.27
CLOCK-207ENST00000508049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLOCK-207ENST00000508049 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
CLOCK-207ENST00000508049 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
CLOCK-207ENST00000508049 CAPN15O75808 1086 aa16.14■□□□□ 0.17
CLOCK-207ENST00000508049 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
CLOCK-207ENST00000508049 DSG3P32926 999 aa16■□□□□ 0.15
CLOCK-207ENST00000508049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
CLOCK-207ENST00000508049 APLP2Q06481 763 aa15.95■□□□□ 0.14
CLOCK-207ENST00000508049 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
CLOCK-207ENST00000508049 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
CLOCK-207ENST00000508049 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
CLOCK-207ENST00000508049 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
CLOCK-207ENST00000508049 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
CLOCK-207ENST00000508049 ABCB7O75027 752 aa15.76■□□□□ 0.11
CLOCK-207ENST00000508049 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
CLOCK-207ENST00000508049 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
CLOCK-207ENST00000508049 POLA2Q14181 598 aa15.46■□□□□ 0.07
CLOCK-207ENST00000508049 ZBTB22O15209 634 aa15.38■□□□□ 0.05
CLOCK-207ENST00000508049 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
CLOCK-207ENST00000508049 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
CLOCK-207ENST00000508049 POTEHQ6S545 545 aa15.24■□□□□ 0.03
CLOCK-207ENST00000508049 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
CLOCK-207ENST00000508049 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
CLOCK-207ENST00000508049 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
CLOCK-207ENST00000508049 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
CLOCK-207ENST00000508049 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
CLOCK-207ENST00000508049 FBLN2P98095 1184 aa14.81□□□□□ -0.04
CLOCK-207ENST00000508049 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
CLOCK-207ENST00000508049 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CLOCK-207ENST00000508049 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
CLOCK-207ENST00000508049 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
CLOCK-207ENST00000508049 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
CLOCK-207ENST00000508049 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
CLOCK-207ENST00000508049 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
CLOCK-207ENST00000508049 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
CLOCK-207ENST00000508049 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
CLOCK-207ENST00000508049 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
CLOCK-207ENST00000508049 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLOCK-207ENST00000508049 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
CLOCK-207ENST00000508049 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
CLOCK-207ENST00000508049 SPDYE1Q8NFV5 336 aaPredicted RBP14.42□□□□□ -0.1
CLOCK-207ENST00000508049 HAX1O00165 279 aa14.33□□□□□ -0.12
CLOCK-207ENST00000508049 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLOCK-207ENST00000508049 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
CLOCK-207ENST00000508049 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
CLOCK-207ENST00000508049 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
CLOCK-207ENST00000508049 EVX2Q03828 476 aa14.12□□□□□ -0.15
CLOCK-207ENST00000508049 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
CLOCK-207ENST00000508049 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
CLOCK-207ENST00000508049 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
CLOCK-207ENST00000508049 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
CLOCK-207ENST00000508049 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
CLOCK-207ENST00000508049 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
CLOCK-207ENST00000508049 GABBR2O75899 941 aa13.81□□□□□ -0.2
CLOCK-207ENST00000508049 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
CLOCK-207ENST00000508049 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
CLOCK-207ENST00000508049 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CLOCK-207ENST00000508049 CLCN6P51797 869 aa13.6□□□□□ -0.23
CLOCK-207ENST00000508049 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLOCK-207ENST00000508049 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
CLOCK-207ENST00000508049 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
CLOCK-207ENST00000508049 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
CLOCK-207ENST00000508049 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CLOCK-207ENST00000508049 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
CLOCK-207ENST00000508049 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
CLOCK-207ENST00000508049 LHX8Q68G74 356 aa13.44□□□□□ -0.26
CLOCK-207ENST00000508049 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
CLOCK-207ENST00000508049 MIER1Q8N108 512 aa13.41□□□□□ -0.26
CLOCK-207ENST00000508049 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CLOCK-207ENST00000508049 FKBP8Q14318 412 aa13.4□□□□□ -0.26
CLOCK-207ENST00000508049 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
CLOCK-207ENST00000508049 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
CLOCK-207ENST00000508049 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
CLOCK-207ENST00000508049 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms