RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 NSD3Q9BZ95 1437 aa28.49■■■□□ 2.15
DDR1-255ENST00000504927 CGNL1Q0VF96 1302 aa28.48■■■□□ 2.15
DDR1-255ENST00000504927 AXIN2Q9Y2T1 843 aa28.48■■■□□ 2.15
DDR1-255ENST00000504927 SPATA31A1Q5TZJ5 1347 aa28.47■■■□□ 2.15
DDR1-255ENST00000504927 LARP1Q6PKG0 1096 aaKnown RBP28.46■■■□□ 2.15
DDR1-255ENST00000504927 SEPT12Q8IYM1 358 aa28.44■■■□□ 2.14
DDR1-255ENST00000504927 COL5A2P05997 1499 aaPredicted RBP28.44■■■□□ 2.14
DDR1-255ENST00000504927 COL18A1P39060 1754 aa28.44■■■□□ 2.14
DDR1-255ENST00000504927 FAM98CQ17RN3 349 aaKnown RBP28.43■■■□□ 2.14
DDR1-255ENST00000504927 THRAP3Q9Y2W1 955 aaKnown RBP28.43■■■□□ 2.14
DDR1-255ENST00000504927 ZEB1P37275 1124 aaPredicted RBP28.42■■■□□ 2.14
DDR1-255ENST00000504927 ABCC6O95255 1503 aa28.42■■■□□ 2.14
DDR1-255ENST00000504927 BARGINQ6ZT62 677 aa28.41■■■□□ 2.14
DDR1-255ENST00000504927 TCP11L2Q8N4U5 519 aa28.41■■■□□ 2.14
DDR1-255ENST00000504927 THSD7AQ9UPZ6 1657 aa28.4■■■□□ 2.14
DDR1-255ENST00000504927 TOM1L2Q6ZVM7 507 aa28.4■■■□□ 2.14
DDR1-255ENST00000504927 IP6K1Q92551 441 aa28.4■■■□□ 2.14
DDR1-255ENST00000504927 USP35Q9P2H5 1018 aa28.4■■■□□ 2.14
DDR1-255ENST00000504927 WDR17Q8IZU2 1322 aa28.4■■■□□ 2.14
DDR1-255ENST00000504927 CRB1P82279 1406 aa28.39■■■□□ 2.14
DDR1-255ENST00000504927 KNSTRNQ9Y448 316 aa28.39■■■□□ 2.14
DDR1-255ENST00000504927 CCDC7Q96M83 1385 aa28.38■■■□□ 2.13
DDR1-255ENST00000504927 A0A0G2JS52 829 aa28.38■■■□□ 2.13
DDR1-255ENST00000504927 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
DDR1-255ENST00000504927 MYT1Q01538 1121 aa28.38■■■□□ 2.13
DDR1-255ENST00000504927 AMPHP49418 695 aa28.37■■■□□ 2.13
DDR1-255ENST00000504927 MAP3K19Q56UN5 1328 aa28.37■■■□□ 2.13
DDR1-255ENST00000504927 WASHC2AQ641Q2 1341 aa28.37■■■□□ 2.13
DDR1-255ENST00000504927 RGPD5Q99666 1765 aa28.35■■■□□ 2.13
DDR1-255ENST00000504927 FBLN1P23142 703 aa28.35■■■□□ 2.13
DDR1-255ENST00000504927 KRT27Q7Z3Y8 459 aa28.34■■■□□ 2.13
DDR1-255ENST00000504927 CARD10Q9BWT7 1032 aa28.34■■■□□ 2.13
DDR1-255ENST00000504927 BLMP54132 1417 aaPredicted RBP28.34■■■□□ 2.13
DDR1-255ENST00000504927 RRS1Q15050 365 aaKnown RBP28.33■■■□□ 2.13
DDR1-255ENST00000504927 ERBB3P21860 1342 aa28.33■■■□□ 2.13
DDR1-255ENST00000504927 NSD2O96028 1365 aa28.33■■■□□ 2.13
DDR1-255ENST00000504927 KIF20BQ96Q89 1820 aa28.32■■■□□ 2.12
DDR1-255ENST00000504927 HOXC9P31274 260 aa28.32■■■□□ 2.12
DDR1-255ENST00000504927 ANKRD24Q8TF21 1146 aa28.32■■■□□ 2.12
DDR1-255ENST00000504927 LTN1O94822 1766 aa28.32■■■□□ 2.12
DDR1-255ENST00000504927 RTL1A6NKG5 1358 aa28.3■■■□□ 2.12
DDR1-255ENST00000504927 KIF24Q5T7B8 1368 aa28.3■■■□□ 2.12
DDR1-255ENST00000504927 CDCA7Q9BWT1 371 aaPredicted RBP28.3■■■□□ 2.12
DDR1-255ENST00000504927 PER1O15534 1290 aaPredicted RBP28.28■■■□□ 2.12
DDR1-255ENST00000504927 NLRP2Q9NX02 1062 aa28.28■■■□□ 2.12
DDR1-255ENST00000504927 AMER1Q5JTC6 1135 aaPredicted RBP28.25■■■□□ 2.11
DDR1-255ENST00000504927 MORC1Q86VD1 984 aa28.25■■■□□ 2.11
DDR1-255ENST00000504927 CCDC125Q86Z20 511 aa28.25■■■□□ 2.11
DDR1-255ENST00000504927 PDE3BQ13370 1112 aa28.24■■■□□ 2.11
DDR1-255ENST00000504927 FAM182BQ5T319 152 aa28.24■■■□□ 2.11
DDR1-255ENST00000504927 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
DDR1-255ENST00000504927 FLT4P35916 1363 aa28.24■■■□□ 2.11
DDR1-255ENST00000504927 EMILIN1Q9Y6C2 1016 aa28.22■■■□□ 2.11
DDR1-255ENST00000504927 INSRP06213 1382 aa28.22■■■□□ 2.11
DDR1-255ENST00000504927 WNK3Q9BYP7 1800 aa28.21■■■□□ 2.11
DDR1-255ENST00000504927 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
DDR1-255ENST00000504927 HSP90AB2PQ58FF8 381 aa28.21■■■□□ 2.11
DDR1-255ENST00000504927 POLKQ9UBT6 870 aa28.21■■■□□ 2.11
DDR1-255ENST00000504927 PPM1GO15355 546 aaPredicted RBP28.2■■■□□ 2.1
DDR1-255ENST00000504927 PARP4Q9UKK3 1724 aaKnown RBP28.2■■■□□ 2.1
DDR1-255ENST00000504927 DDB1Q16531 1140 aa28.19■■■□□ 2.1
DDR1-255ENST00000504927 SMG6Q86US8 1419 aaKnown RBP28.18■■■□□ 2.1
DDR1-255ENST00000504927 LRRC37A3O60309 1634 aa28.18■■■□□ 2.1
DDR1-255ENST00000504927 EXOC5O00471 708 aa28.17■■■□□ 2.1
DDR1-255ENST00000504927 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
DDR1-255ENST00000504927 NPC1L1Q9UHC9 1359 aa28.16■■■□□ 2.1
DDR1-255ENST00000504927 IL2RBP14784 551 aa28.16■■■□□ 2.1
DDR1-255ENST00000504927 ANKRD26Q9UPS8 1709 aa28.15■■■□□ 2.1
DDR1-255ENST00000504927 DISP2A7MBM2 1401 aa28.14■■■□□ 2.1
DDR1-255ENST00000504927 CC2D1BQ5T0F9 858 aaKnown RBP28.12■■■□□ 2.09
DDR1-255ENST00000504927 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
DDR1-255ENST00000504927 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
DDR1-255ENST00000504927 SF3B2Q13435 895 aaKnown RBP28.11■■■□□ 2.09
DDR1-255ENST00000504927 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
DDR1-255ENST00000504927 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
DDR1-255ENST00000504927 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
DDR1-255ENST00000504927 MAP2P11137 1827 aaKnown RBP28.09■■■□□ 2.09
DDR1-255ENST00000504927 DEFB132Q7Z7B7 95 aa28.09■■■□□ 2.09
DDR1-255ENST00000504927 RGPD1P0DJD0 1748 aa28.08■■■□□ 2.09
DDR1-255ENST00000504927 MARCH10Q8NA82 808 aaPredicted RBP28.05■■■□□ 2.08
DDR1-255ENST00000504927 RAPGEF4Q8WZA2 1011 aa28.04■■■□□ 2.08
DDR1-255ENST00000504927 RGPD2P0DJD1 1756 aa28.04■■■□□ 2.08
DDR1-255ENST00000504927 EIF4A2Q14240 407 aaKnown RBP28.03■■■□□ 2.08
DDR1-255ENST00000504927 OVOS2A0A0G2JMS6 1433 aa28.02■■■□□ 2.08
DDR1-255ENST00000504927 TNS2Q63HR2 1409 aa28.01■■■□□ 2.08
DDR1-255ENST00000504927 TRIM37O94972 964 aa28.01■■■□□ 2.07
DDR1-255ENST00000504927 MTHFSP49914 203 aa28.01■■■□□ 2.07
DDR1-255ENST00000504927 USHBP1Q8N6Y0 703 aa28.01■■■□□ 2.07
DDR1-255ENST00000504927 EYA1Q99502 592 aa28.01■■■□□ 2.07
DDR1-255ENST00000504927 BCL9O00512 1426 aa28.01■■■□□ 2.07
DDR1-255ENST00000504927 TATP17735 454 aaPredicted RBP28■■■□□ 2.07
DDR1-255ENST00000504927 CNGB1Q14028 1251 aaPredicted RBP27.99■■■□□ 2.07
DDR1-255ENST00000504927 ZCRB1Q8TBF4 217 aaKnown RBP27.99■■■□□ 2.07
DDR1-255ENST00000504927 BAG6P46379 1132 aa27.98■■■□□ 2.07
DDR1-255ENST00000504927 SBF2Q86WG5 1849 aa27.96■■■□□ 2.07
DDR1-255ENST00000504927 DDX54Q8TDD1 881 aaKnown RBP27.95■■■□□ 2.06
DDR1-255ENST00000504927 NCAPD2Q15021 1401 aa27.94■■■□□ 2.06
DDR1-255ENST00000504927 EN1Q05925 392 aaPredicted RBP27.94■■■□□ 2.06
DDR1-255ENST00000504927 DDX10Q13206 875 aaKnown RBP27.94■■■□□ 2.06
DDR1-255ENST00000504927 IL13P35225 146 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms